RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	YOR022C	Q12204	715 aa		4.22	□□□□□ -1.73
PMI40	YER003C	RIB2	Q12362	591 aa	Known RBP	4.22	□□□□□ -1.73
PMI40	YER003C	RPS21B	Q3E754	87 aa	Known RBP	4.22	□□□□□ -1.73
PMI40	YER003C	YLR149C	Q99296	730 aa		4.22	□□□□□ -1.73
PMI40	YER003C	CYC1	P00044	109 aa	Predicted RBP	4.21	□□□□□ -1.74
PMI40	YER003C	RPS21A	P0C0V8	87 aa	Known RBP	4.21	□□□□□ -1.74
PMI40	YER003C	RPD3	P32561	433 aa		4.21	□□□□□ -1.74
PMI40	YER003C	YKU70	P32807	602 aa		4.21	□□□□□ -1.74
PMI40	YER003C	SRP101	P32916	621 aa		4.21	□□□□□ -1.74
PMI40	YER003C	LRG1	P35688	1017 aa		4.21	□□□□□ -1.74
PMI40	YER003C	FLR1	P38124	548 aa		4.21	□□□□□ -1.74
PMI40	YER003C	YIL108W	P40483	696 aa	Known RBP	4.21	□□□□□ -1.74
PMI40	YER003C	BFA1	P47113	574 aa		4.21	□□□□□ -1.74
PMI40	YER003C	TAN1	P53072	289 aa	Predicted RBP	4.21	□□□□□ -1.74
PMI40	YER003C	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
PMI40	YER003C	YGR012W	P53206	393 aa		4.21	□□□□□ -1.74
PMI40	YER003C	SGD1	Q06132	899 aa		4.21	□□□□□ -1.74
PMI40	YER003C	DCS2	Q12123	353 aa		4.21	□□□□□ -1.74
PMI40	YER003C	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.74
PMI40	YER003C	YDL177C	Q12257	170 aa		4.21	□□□□□ -1.74
PMI40	YER003C	Q0142	Q9ZZW4	58 aa		4.21	□□□□□ -1.74
PMI40	YER003C	RPP2A	P05319	106 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	SEC65	P29478	273 aa		4.2	□□□□□ -1.74
PMI40	YER003C	MRS6	P32864	603 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	POA1	P38218	177 aa		4.2	□□□□□ -1.74
PMI40	YER003C	YHL041W	P38730	149 aa		4.2	□□□□□ -1.74
PMI40	YER003C	ZRG8	P40021	1076 aa		4.2	□□□□□ -1.74
PMI40	YER003C	HIS6	P40545	261 aa		4.2	□□□□□ -1.74
PMI40	YER003C	YJR039W	P47107	1121 aa		4.2	□□□□□ -1.74
PMI40	YER003C	RNR4	P49723	345 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	PSP2	P50109	593 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	PRP43	P53131	767 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	DUS1	P53759	423 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	CNM67	P53865	581 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	MRPL22	P53881	309 aa		4.2	□□□□□ -1.74
PMI40	YER003C	SVL3	Q03088	825 aa	Known RBP	4.2	□□□□□ -1.74
PMI40	YER003C	SSL1	Q04673	461 aa	Predicted RBP	4.2	□□□□□ -1.74
PMI40	YER003C	GAL10	P04397	699 aa		4.19	□□□□□ -1.74
PMI40	YER003C	SWI6	P09959	803 aa		4.19	□□□□□ -1.74
PMI40	YER003C	PFK1	P16861	987 aa	Known RBP	4.19	□□□□□ -1.74
PMI40	YER003C	SER1	P33330	395 aa	Known RBP	4.19	□□□□□ -1.74
PMI40	YER003C	ATG19	P35193	415 aa		4.19	□□□□□ -1.74
PMI40	YER003C	MIP6	P38760	659 aa	Known RBP	4.19	□□□□□ -1.74
PMI40	YER003C	SSZ1	P38788	538 aa	Known RBP	4.19	□□□□□ -1.74
PMI40	YER003C	BEM4	P39011	633 aa		4.19	□□□□□ -1.74
PMI40	YER003C	GPD1	Q00055	391 aa	Known RBP	4.19	□□□□□ -1.74
PMI40	YER003C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PMI40	YER003C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PMI40	YER003C	HCA4	P20448	770 aa	Known RBP	4.18	□□□□□ -1.74
PMI40	YER003C	SEG2	P34250	1132 aa		4.18	□□□□□ -1.74
PMI40	YER003C	YKL222C	P35995	705 aa		4.18	□□□□□ -1.74
PMI40	YER003C	FAT1	P38225	669 aa		4.18	□□□□□ -1.74
PMI40	YER003C	LAM1	P38851	1228 aa		4.18	□□□□□ -1.74
PMI40	YER003C	CTF8	P38877	133 aa		4.18	□□□□□ -1.74
PMI40	YER003C	UBP5	P39944	805 aa		4.18	□□□□□ -1.74
PMI40	YER003C	ACA1	P39970	489 aa		4.18	□□□□□ -1.74
PMI40	YER003C	ECM38	Q05902	660 aa	Predicted RBP	4.18	□□□□□ -1.74
PMI40	YER003C	MSS18	P08593	268 aa		4.17	□□□□□ -1.74
PMI40	YER003C	HOP1	P20050	605 aa		4.17	□□□□□ -1.74
PMI40	YER003C	GAS1	P22146	559 aa	Known RBP	4.17	□□□□□ -1.74
PMI40	YER003C	YKR075C	P36155	307 aa		4.17	□□□□□ -1.74
PMI40	YER003C	KTR4	P38131	464 aa		4.17	□□□□□ -1.74
PMI40	YER003C	SDP1	P40479	209 aa		4.17	□□□□□ -1.74
PMI40	YER003C	MND2	P40577	368 aa		4.17	□□□□□ -1.74
PMI40	YER003C	QRI7	P43122	407 aa		4.17	□□□□□ -1.74
PMI40	YER003C	SSY5	P47002	699 aa		4.17	□□□□□ -1.74
PMI40	YER003C	HOL1	P53389	586 aa		4.17	□□□□□ -1.74
PMI40	YER003C	ARP4	P80428	489 aa		4.17	□□□□□ -1.74
PMI40	YER003C	SOD2	P00447	233 aa		4.16	□□□□□ -1.74
PMI40	YER003C	SPE1	P08432	466 aa		4.16	□□□□□ -1.74
PMI40	YER003C	PHO81	P17442	1178 aa		4.16	□□□□□ -1.74
PMI40	YER003C	ATP12	P22135	325 aa		4.16	□□□□□ -1.74
PMI40	YER003C	DBF20	P32328	564 aa		4.16	□□□□□ -1.74
PMI40	YER003C	AKL1	P38080	1108 aa	Known RBP	4.16	□□□□□ -1.74
PMI40	YER003C	YHR078W	P38799	552 aa		4.16	□□□□□ -1.74
PMI40	YER003C	MEF2	P39677	819 aa		4.16	□□□□□ -1.74
PMI40	YER003C	SAP185	P40856	1058 aa		4.16	□□□□□ -1.74
PMI40	YER003C	BRE5	P53741	515 aa	Known RBP	4.16	□□□□□ -1.74
PMI40	YER003C	ORC4	P54791	529 aa		4.16	□□□□□ -1.74
PMI40	YER003C	CDA2	Q06703	312 aa		4.16	□□□□□ -1.74
PMI40	YER003C	RXT3	Q07458	294 aa		4.16	□□□□□ -1.74
PMI40	YER003C	SSH4	P32343	579 aa		4.15	□□□□□ -1.75
PMI40	YER003C	PET309	P32522	965 aa	Predicted RBP	4.15	□□□□□ -1.75
PMI40	YER003C	TSA1	P34760	196 aa	Known RBP	4.15	□□□□□ -1.75
PMI40	YER003C	SRP68	P38687	599 aa	Known RBP	4.15	□□□□□ -1.75
PMI40	YER003C	VID27	P40157	782 aa		4.15	□□□□□ -1.75
PMI40	YER003C	URM1	P40554	99 aa	Predicted RBP	4.15	□□□□□ -1.75
PMI40	YER003C	MTR3	P48240	250 aa	Predicted RBP	4.15	□□□□□ -1.75
PMI40	YER003C	RIM8	P53179	542 aa		4.15	□□□□□ -1.75
PMI40	YER003C	NOP15	P53927	220 aa	Predicted RBP	4.15	□□□□□ -1.75
PMI40	YER003C	CEG1	Q01159	459 aa	Predicted RBP	4.15	□□□□□ -1.75
PMI40	YER003C	GCN5	Q03330	439 aa		4.15	□□□□□ -1.75
PMI40	YER003C	ROT1	Q03691	256 aa		4.15	□□□□□ -1.75
PMI40	YER003C	YDR132C	Q03900	495 aa		4.15	□□□□□ -1.75
PMI40	YER003C	GPB1	Q08886	897 aa		4.15	□□□□□ -1.75
PMI40	YER003C	YOL114C	Q12322	202 aa		4.15	□□□□□ -1.75
PMI40	YER003C	RPS13	P05756	151 aa	Known RBP	4.14	□□□□□ -1.75
PMI40	YER003C	APA1	P16550	321 aa	Known RBP	4.14	□□□□□ -1.75
PMI40	YER003C	EXO84	P38261	753 aa		4.14	□□□□□ -1.75
PMI40	YER003C	YHR202W	P38887	602 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms