RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
TFB1	YDR311W	GLN4	P13188	809 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	YKR018C	P36114	725 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	MAL31	P38156	614 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	SET5	P38890	526 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	PIK1	P39104	1066 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	RRT14	P40470	206 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	MNT3	P40549	630 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	TRS130	Q03660	1102 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	YDR056C	Q12025	205 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	OSW2	Q12202	724 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	COQ4	O13525	335 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	PRC1	P00729	532 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	HOP1	P20050	605 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	MFT1	P33441	392 aa	Known RBP	3.3	□□□□□ -1.88
TFB1	YDR311W	STE13	P33894	931 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	FLR1	P38124	548 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	EAF5	P39995	279 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	YFL052W	P43551	465 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	BNA2	P47125	453 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	YKR011C	Q02209	353 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	SSL1	Q04673	461 aa	Predicted RBP	3.3	□□□□□ -1.88
TFB1	YDR311W	THI21	Q08975	551 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	SVS1	Q12254	260 aa		3.3	□□□□□ -1.88
TFB1	YDR311W	RPS9A	O13516	197 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	CDC26	P14724	124 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	PHO81	P17442	1178 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	MSM1	P22438	575 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	NFU1	P32860	256 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	TYE7	P33122	291 aa	Predicted RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	CCZ1	P38273	704 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	YHL012W	P38709	493 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	SSZ1	P38788	538 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	NDE1	P40215	560 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	IML2	P47031	731 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	ASK10	P48361	1146 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	RNR4	P49723	345 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	ESF2	P53743	316 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	TEP1	P53916	434 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	GTR1	Q00582	310 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	LEE1	Q02799	301 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	CWC2	Q12046	339 aa	Predicted RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	NUR1	Q12066	484 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	YVC1	Q12324	675 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	GCD1	P09032	578 aa	Predicted RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	PET309	P32522	965 aa	Predicted RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	LIP5	P32875	414 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	SHM2	P37291	469 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	YIL092W	P40497	633 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	BNA1	P47096	177 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	ZIP2	P53061	704 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	PCL10	P53124	433 aa		3.29	□□□□□ -1.88
TFB1	YDR311W	BRE5	P53741	515 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	NEW1	Q08972	1196 aa	Known RBP	3.29	□□□□□ -1.88
TFB1	YDR311W	INH1	P01097	85 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	SWI6	P09959	803 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	GFA1	P14742	717 aa	Known RBP	3.28	□□□□□ -1.88
TFB1	YDR311W	HSC82	P15108	705 aa	Known RBP	3.28	□□□□□ -1.88
TFB1	YDR311W	MSH1	P25846	959 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	CHS3	P29465	1165 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	WHI3	P34761	661 aa	Known RBP	3.28	□□□□□ -1.88
TFB1	YDR311W	ABZ1	P37254	787 aa	Predicted RBP	3.28	□□□□□ -1.88
TFB1	YDR311W	VID28	P40547	921 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	MMM1	P41800	426 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	MEP3	P53390	489 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	YLR407W	Q06070	228 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	RSC58	Q07979	502 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	NGL1	Q08213	363 aa	Known RBP	3.28	□□□□□ -1.88
TFB1	YDR311W	RSB1	Q08417	382 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	NSI1	Q12457	570 aa		3.28	□□□□□ -1.88
TFB1	YDR311W	RPC82	P32349	654 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	POA1	P38218	177 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	YIL108W	P40483	696 aa	Known RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	CIT3	P43635	486 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	YJR039W	P47107	1121 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	RAI1	P53063	387 aa	Known RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	NOP15	P53927	220 aa	Predicted RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	HLR1	Q04429	423 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	ERP4	Q12450	207 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	RTP1	Q12751	981 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	ADH4	P10127	382 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	PHO3	P24031	467 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	SRO9	P25567	434 aa	Known RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	HXT4	P32467	576 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	PSY4	P38193	441 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	YHR202W	P38887	602 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	SPC72	P39723	622 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	IES1	P43579	692 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	IRC5	P43610	853 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	MAD3	P47074	515 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	DUS1	P53759	423 aa	Known RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	BLS1	Q06071	122 aa		3.27	□□□□□ -1.89
TFB1	YDR311W	CLF1	Q12309	687 aa	Predicted RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	RIB2	Q12362	591 aa	Known RBP	3.27	□□□□□ -1.89
TFB1	YDR311W	FOB1	O13329	566 aa		3.26	□□□□□ -1.89
TFB1	YDR311W	CMP2	P14747	604 aa		3.26	□□□□□ -1.89
TFB1	YDR311W	SRP101	P32916	621 aa		3.26	□□□□□ -1.89
TFB1	YDR311W	MDL2	P33311	773 aa		3.26	□□□□□ -1.89
TFB1	YDR311W	AKL1	P38080	1108 aa	Known RBP	3.26	□□□□□ -1.89
TFB1	YDR311W	RFC5	P38251	354 aa		3.26	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms