RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C PER1P25625 357 aa5.64□□□□□ -1.51
NUP42YDR192C ETP1P38748 585 aaKnown RBP5.64□□□□□ -1.51
NUP42YDR192C YEN1P40028 759 aa5.64□□□□□ -1.51
NUP42YDR192C DOT6P40059 670 aaKnown RBP5.64□□□□□ -1.51
NUP42YDR192C TY4A-JP47023 414 aa5.64□□□□□ -1.51
NUP42YDR192C ECL1P48235 211 aa5.64□□□□□ -1.51
NUP42YDR192C HDA1P53973 706 aa5.64□□□□□ -1.51
NUP42YDR192C NHX1Q04121 633 aa5.64□□□□□ -1.51
NUP42YDR192C DFG16Q99234 619 aa5.64□□□□□ -1.51
NUP42YDR192C TOM20P35180 183 aa5.63□□□□□ -1.51
NUP42YDR192C HSL7P38274 827 aa5.63□□□□□ -1.51
NUP42YDR192C INP52P50942 1183 aa5.63□□□□□ -1.51
NUP42YDR192C GUD1Q07729 489 aa5.63□□□□□ -1.51
NUP42YDR192C YBR182C-AQ8TGU6 64 aa5.63□□□□□ -1.51
NUP42YDR192C MRC1P25588 1096 aa5.62□□□□□ -1.51
NUP42YDR192C POL12P38121 705 aaPredicted RBP5.62□□□□□ -1.51
NUP42YDR192C YIL108WP40483 696 aaKnown RBP5.62□□□□□ -1.51
NUP42YDR192C CTH1P47976 325 aa5.62□□□□□ -1.51
NUP42YDR192C HFD1Q04458 532 aa5.62□□□□□ -1.51
NUP42YDR192C GUP2Q08929 609 aa5.62□□□□□ -1.51
NUP42YDR192C FAP7Q12055 197 aaPredicted RBP5.62□□□□□ -1.51
NUP42YDR192C PDR11P40550 1411 aa5.62□□□□□ -1.51
NUP42YDR192C TY3B-IQ7LHG5 1498 aaKnown RBP5.62□□□□□ -1.51
NUP42YDR192C MAC1P35192 417 aa5.61□□□□□ -1.51
NUP42YDR192C PCM1P38628 557 aaKnown RBP5.61□□□□□ -1.51
NUP42YDR192C LAM1P38851 1228 aa5.61□□□□□ -1.51
NUP42YDR192C MET12P46151 657 aa5.61□□□□□ -1.51
NUP42YDR192C HXT16P47185 567 aa5.61□□□□□ -1.51
NUP42YDR192C MRPL22P53881 309 aa5.61□□□□□ -1.51
NUP42YDR192C RIA1P53893 1110 aa5.61□□□□□ -1.51
NUP42YDR192C LRS4Q04087 347 aaKnown RBP5.61□□□□□ -1.51
NUP42YDR192C ADY3Q07732 790 aa5.61□□□□□ -1.51
NUP42YDR192C TPO1Q07824 586 aa5.61□□□□□ -1.51
NUP42YDR192C YDL177CQ12257 170 aa5.61□□□□□ -1.51
NUP42YDR192C GIN4Q12263 1142 aa5.61□□□□□ -1.51
NUP42YDR192C FBP1P09201 348 aa5.6□□□□□ -1.51
NUP42YDR192C URM1P40554 99 aaPredicted RBP5.6□□□□□ -1.51
NUP42YDR192C YFL052WP43551 465 aa5.6□□□□□ -1.51
NUP42YDR192C MET13P53128 600 aa5.6□□□□□ -1.51
NUP42YDR192C ATG33Q06485 197 aa5.6□□□□□ -1.51
NUP42YDR192C RXT3Q07458 294 aa5.6□□□□□ -1.51
NUP42YDR192C THI21Q08975 551 aa5.6□□□□□ -1.51
NUP42YDR192C YPL277CQ08989 487 aa5.6□□□□□ -1.51
NUP42YDR192C YOR022CQ12204 715 aa5.6□□□□□ -1.51
NUP42YDR192C LEU2P04173 364 aaPredicted RBP5.59□□□□□ -1.51
NUP42YDR192C YCL002CP25565 263 aa5.59□□□□□ -1.51
NUP42YDR192C CTF8P38877 133 aa5.59□□□□□ -1.51
NUP42YDR192C CKB2P38930 258 aa5.59□□□□□ -1.51
NUP42YDR192C NPY1P53164 384 aa5.59□□□□□ -1.51
NUP42YDR192C DUS1P53759 423 aaKnown RBP5.59□□□□□ -1.51
NUP42YDR192C NOP12Q08208 459 aaKnown RBP5.59□□□□□ -1.51
NUP42YDR192C HAL9Q12180 1030 aa5.59□□□□□ -1.51
NUP42YDR192C RAD9P14737 1309 aa5.58□□□□□ -1.52
NUP42YDR192C SPT7P35177 1332 aa5.58□□□□□ -1.52
NUP42YDR192C HIS5P07172 385 aa5.58□□□□□ -1.52
NUP42YDR192C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
NUP42YDR192C SED4P25365 1065 aa5.58□□□□□ -1.52
NUP42YDR192C RPD3P32561 433 aa5.58□□□□□ -1.52
NUP42YDR192C MEF2P39677 819 aa5.58□□□□□ -1.52
NUP42YDR192C SDP1P40479 209 aa5.58□□□□□ -1.52
NUP42YDR192C BNA2P47125 453 aa5.58□□□□□ -1.52
NUP42YDR192C ZIP2P53061 704 aa5.58□□□□□ -1.52
NUP42YDR192C GTF1P53260 183 aaPredicted RBP5.58□□□□□ -1.52
NUP42YDR192C GCN5Q03330 439 aa5.58□□□□□ -1.52
NUP42YDR192C ROT1Q03691 256 aa5.58□□□□□ -1.52
NUP42YDR192C SSL1Q04673 461 aaPredicted RBP5.58□□□□□ -1.52
NUP42YDR192C GPB1Q08886 897 aa5.58□□□□□ -1.52
NUP42YDR192C BCK1Q01389 1478 aa5.58□□□□□ -1.52
NUP42YDR192C GLT1Q12680 2145 aaKnown RBP5.57□□□□□ -1.52
NUP42YDR192C HMG1P12683 1054 aa5.57□□□□□ -1.52
NUP42YDR192C PRP19P32523 503 aaKnown RBP5.57□□□□□ -1.52
NUP42YDR192C YHR078WP38799 552 aa5.57□□□□□ -1.52
NUP42YDR192C PRP43P53131 767 aaKnown RBP5.57□□□□□ -1.52
NUP42YDR192C MTQ2Q03920 221 aaPredicted RBP5.57□□□□□ -1.52
NUP42YDR192C CRR1Q05790 422 aa5.57□□□□□ -1.52
NUP42YDR192C HMI1Q12039 706 aa5.57□□□□□ -1.52
NUP42YDR192C YLR419WQ06698 1435 aaKnown RBP5.57□□□□□ -1.52
NUP42YDR192C RPP0P05317 312 aaKnown RBP5.56□□□□□ -1.52
NUP42YDR192C NGG1P32494 702 aa5.56□□□□□ -1.52
NUP42YDR192C GZF3P42944 551 aaKnown RBP5.56□□□□□ -1.52
NUP42YDR192C YJR096WP47137 282 aa5.56□□□□□ -1.52
NUP42YDR192C GPG1P53130 126 aa5.56□□□□□ -1.52
NUP42YDR192C VPS62P53285 467 aa5.56□□□□□ -1.52
NUP42YDR192C PLB2Q03674 706 aa5.56□□□□□ -1.52
NUP42YDR192C YDR338CQ05497 695 aa5.56□□□□□ -1.52
NUP42YDR192C DUS4Q06063 367 aa5.56□□□□□ -1.52
NUP42YDR192C YTM1Q12024 460 aaPredicted RBP5.56□□□□□ -1.52
NUP42YDR192C CCR4P31384 837 aaKnown RBP5.55□□□□□ -1.52
NUP42YDR192C YKR018CP36114 725 aa5.55□□□□□ -1.52
NUP42YDR192C RET2P43621 546 aa5.55□□□□□ -1.52
NUP42YDR192C CHA4P43634 648 aa5.55□□□□□ -1.52
NUP42YDR192C AIM14P53109 570 aa5.55□□□□□ -1.52
NUP42YDR192C YDR132CQ03900 495 aa5.55□□□□□ -1.52
NUP42YDR192C RPN7Q06103 429 aaKnown RBP5.55□□□□□ -1.52
NUP42YDR192C ACK1Q07622 623 aaPredicted RBP5.55□□□□□ -1.52
NUP42YDR192C TRE2Q08693 809 aa5.55□□□□□ -1.52
NUP42YDR192C UPC2Q12151 913 aa5.55□□□□□ -1.52
NUP42YDR192C SOD2P00447 233 aa5.54□□□□□ -1.52
NUP42YDR192C EMC1P25574 760 aa5.54□□□□□ -1.52
NUP42YDR192C LRG1P35688 1017 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 157.2 ms