RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W VHC1P38329 1120 aa6.93□□□□□ -1.3
BDF2YDL070W MMS21P38632 267 aa6.93□□□□□ -1.3
BDF2YDL070W OAF1P39720 1047 aaPredicted RBP6.93□□□□□ -1.3
BDF2YDL070W USE1P53146 245 aa6.93□□□□□ -1.3
BDF2YDL070W DRN1P53255 507 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W YNL247WP53852 767 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W OSH6Q02201 448 aa6.93□□□□□ -1.3
BDF2YDL070W TDA5Q06417 326 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W VIK1Q12045 647 aa6.93□□□□□ -1.3
BDF2YDL070W THS1P04801 734 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W YEL076C-AP0CX16 216 aa6.93□□□□□ -1.3
BDF2YDL070W YLR464WP0CX17 216 aa6.93□□□□□ -1.3
BDF2YDL070W RET1P22276 1149 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W KIP2P28743 706 aa6.93□□□□□ -1.3
BDF2YDL070W RPN2P32565 945 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W MRP8P35719 219 aa6.93□□□□□ -1.3
BDF2YDL070W MSG5P38590 489 aa6.93□□□□□ -1.3
BDF2YDL070W YEL076CP39971 216 aa6.93□□□□□ -1.3
BDF2YDL070W UBP15P50101 1230 aa6.93□□□□□ -1.3
BDF2YDL070W RPL22BP56628 122 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W HMO1Q03973 246 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W ARR1Q06596 294 aa6.93□□□□□ -1.3
BDF2YDL070W TSR2Q06672 205 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W RLP24Q07915 199 aaKnown RBP6.93□□□□□ -1.3
BDF2YDL070W TAF3Q12297 353 aa6.93□□□□□ -1.3
BDF2YDL070W HAT1Q12341 374 aa6.93□□□□□ -1.3
BDF2YDL070W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
BDF2YDL070W CKA2P19454 339 aa6.92□□□□□ -1.3
BDF2YDL070W SAS3P34218 831 aa6.92□□□□□ -1.3
BDF2YDL070W YKL023WP36103 277 aaKnown RBP6.92□□□□□ -1.3
BDF2YDL070W FES1P38260 290 aa6.92□□□□□ -1.3
BDF2YDL070W END3P39013 349 aa6.92□□□□□ -1.3
BDF2YDL070W ARB1P40024 610 aaKnown RBP6.92□□□□□ -1.3
BDF2YDL070W PSY2P40164 858 aa6.92□□□□□ -1.3
BDF2YDL070W SDS3P40505 327 aa6.92□□□□□ -1.3
BDF2YDL070W CIT3P43635 486 aa6.92□□□□□ -1.3
BDF2YDL070W RNR4P49723 345 aaKnown RBP6.92□□□□□ -1.3
BDF2YDL070W VID30P53076 958 aa6.92□□□□□ -1.3
BDF2YDL070W YDR179W-AQ03983 463 aa6.92□□□□□ -1.3
BDF2YDL070W IRC3Q06683 689 aa6.92□□□□□ -1.3
BDF2YDL070W ATG20Q07528 640 aa6.92□□□□□ -1.3
BDF2YDL070W OXR1Q08952 273 aa6.92□□□□□ -1.3
BDF2YDL070W GET4Q12125 312 aa6.92□□□□□ -1.3
BDF2YDL070W SEC63P14906 663 aa6.91□□□□□ -1.3
BDF2YDL070W HEM15P16622 393 aa6.91□□□□□ -1.3
BDF2YDL070W PUF4P25339 888 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
BDF2YDL070W TRK2P28584 889 aa6.91□□□□□ -1.3
BDF2YDL070W MGM1P32266 881 aa6.91□□□□□ -1.3
BDF2YDL070W TRM2P33753 639 aa6.91□□□□□ -1.3
BDF2YDL070W ETP1P38748 585 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W TAF1P46677 1066 aa6.91□□□□□ -1.3
BDF2YDL070W NOP9P47077 666 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W PTA1Q01329 785 aaPredicted RBP6.91□□□□□ -1.3
BDF2YDL070W RAT1Q02792 1006 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W MSH6Q03834 1242 aa6.91□□□□□ -1.3
BDF2YDL070W CSM3Q04659 317 aa6.91□□□□□ -1.3
BDF2YDL070W RGA2Q06407 1009 aa6.91□□□□□ -1.3
BDF2YDL070W VHS3Q08438 674 aa6.91□□□□□ -1.3
BDF2YDL070W SEM1O94742 89 aa6.91□□□□□ -1.3
BDF2YDL070W SUP45P12385 437 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W ICL1P28240 557 aaPredicted RBP6.91□□□□□ -1.3
BDF2YDL070W RPL8BP29453 256 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W PTK1P36002 662 aaPredicted RBP6.91□□□□□ -1.3
BDF2YDL070W YKR015CP36111 568 aa6.91□□□□□ -1.3
BDF2YDL070W YHL008CP38750 627 aa6.91□□□□□ -1.3
BDF2YDL070W SHC1P39000 512 aa6.91□□□□□ -1.3
BDF2YDL070W CCT3P39077 534 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W DPH1P40487 425 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W GUP1P53154 560 aa6.91□□□□□ -1.3
BDF2YDL070W DUS1P53759 423 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W BNI5P53890 448 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W RSM24Q03976 319 aa6.91□□□□□ -1.3
BDF2YDL070W DSE3Q08729 430 aa6.91□□□□□ -1.3
BDF2YDL070W TCO89Q08921 799 aa6.91□□□□□ -1.3
BDF2YDL070W FAL1Q12099 399 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W MDM20Q12387 796 aaKnown RBP6.91□□□□□ -1.3
BDF2YDL070W RAD61Q99359 647 aa6.91□□□□□ -1.3
BDF2YDL070W PMD1P32634 1753 aa6.91□□□□□ -1.3
BDF2YDL070W GCR1P07261 785 aa6.9□□□□□ -1.3
BDF2YDL070W VMA2P16140 517 aaKnown RBP6.9□□□□□ -1.3
BDF2YDL070W HEM3P28789 327 aa6.9□□□□□ -1.3
BDF2YDL070W RTG2P32608 588 aaKnown RBP6.9□□□□□ -1.3
BDF2YDL070W PTH2P34222 208 aa6.9□□□□□ -1.3
BDF2YDL070W DBP7P36120 742 aaKnown RBP6.9□□□□□ -1.3
BDF2YDL070W UBP13P38187 747 aa6.9□□□□□ -1.3
BDF2YDL070W TRM5P38793 499 aa6.9□□□□□ -1.3
BDF2YDL070W ORC6P38826 435 aa6.9□□□□□ -1.3
BDF2YDL070W PFK26P40433 827 aaKnown RBP6.9□□□□□ -1.3
BDF2YDL070W TFG1P41895 735 aaPredicted RBP6.9□□□□□ -1.3
BDF2YDL070W SHE4P51534 789 aa6.9□□□□□ -1.3
BDF2YDL070W NBP1P52919 319 aaPredicted RBP6.9□□□□□ -1.3
BDF2YDL070W ERO1Q03103 563 aa6.9□□□□□ -1.3
BDF2YDL070W YLR297WQ05899 129 aa6.9□□□□□ -1.3
BDF2YDL070W YLH47Q06493 454 aa6.9□□□□□ -1.3
BDF2YDL070W DBP10Q12389 995 aaKnown RBP6.9□□□□□ -1.3
BDF2YDL070W TY1B-AO13527 1196 aaKnown RBP6.89□□□□□ -1.31
BDF2YDL070W CMD1P06787 147 aaKnown RBP6.89□□□□□ -1.31
BDF2YDL070W MPH2P0CD99 609 aa6.89□□□□□ -1.31
BDF2YDL070W CLB2P24869 491 aa6.89□□□□□ -1.31
BDF2YDL070W NPP1P25353 742 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms