RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Rad50P70388 1312 aa15.19■□□□□ 0.02
Rnf40-202ENSMUST00000205694 GnaqP21279 359 aa15.19■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ccdc122Q8BVN0 290 aa15.19■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Dnm1P39053 867 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ankrd13dQ6PD24 605 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Fermt2Q8CIB5 680 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Taf7Q9R1C0 341 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ssrp1Q08943 708 aaKnown RBP15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Zbtb43Q9DAI4 467 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Xrn1P97789 1719 aaKnown RBP15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Hoxc9P09633 260 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Tbc1d32Q3URV1 1296 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ercc6l2Q9JIM3 1537 aa15.18■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Fam83gQ5SWY7 812 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Prpf40aQ9R1C7 953 aaKnown RBP15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Kif24Q6NWW5 1356 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Rbm8a2A0A0N4SUH6 174 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Grm8P47743 908 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Amotl2Q8K371 772 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Nlgn1Q99K10 843 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Rbm8aQ9CWZ3 174 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Lmbr1lQ9D1E5 489 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Amotl1Q9D4H4 968 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Gng11P61953 73 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Trim27Q62158 513 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Serpina10Q8R121 448 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Cnot6lQ8VEG6 555 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Dph6Q9CQ28 267 aa15.17■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ppp4r3aQ6P2K6 820 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Larp6Q8BN59 492 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Usp37Q8C0R0 979 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 KdrP35918 1367 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Atp8b2P98199 1209 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Iffo1Q8BXL9 562 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 StambpQ9CQ26 424 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Efcab2Q9CQ46 164 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ripply1Q2WG77 201 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Bbof1Q3V079 533 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Mrps27Q8BK72 415 aaKnown RBP15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Nkx1-2P42580 305 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Usp25P57080 1055 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ppfia3P60469 1194 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Cbx1P83917 185 aaKnown RBP15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Cavin2Q63918 418 aaKnown RBP15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Tmem143Q8VD26 458 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 FanclQ9CR14 375 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Dydc2Q9D3X8 139 aa15.16■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Vps36Q91XD6 386 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Klhdc4Q921I2 584 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 St5Q924W7 1134 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 NpcdF8VQB8 469 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Gjc1P28229 396 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 LifrP42703 1092 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Myo1bP46735 1107 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Nucb2P81117 420 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ranbp6Q8BIV3 1105 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Ccdc12Q8R344 166 aaKnown RBP15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Hsf2bpQ9D4G2 338 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Terf1P70371 421 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Tbc1d5Q80XQ2 815 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 GckrQ91X44 587 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Haus2Q9CQS9 234 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Dennd3A2RT67 1274 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Krt15Q61414 452 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Pdcl2Q78Y63 240 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Rdm1Q9CQK3 281 aa15.15■□□□□ 0.02
Rnf40-202ENSMUST00000205694 Abca17E9PX95 1733 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Slc4a4O88343 1079 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ccnl1Q52KE7 532 aaKnown RBP15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 RragbQ6NTA4 374 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Fam43aQ8BUP8 424 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 DymQ8CHY3 669 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ginm1Q91WR6 327 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 AdnpQ9Z103 1108 aaKnown RBP15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 E9QMW4 1145 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Nsrp1Q5NCR9 542 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Tmx4Q8C0L0 335 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Vps18Q8R307 973 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 GmnnO88513 206 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ctr9Q62018 1173 aaKnown RBP15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Plagl1Q9JLQ4 704 aa15.14■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Adamts7Q68SA9 1657 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Atp8b3Q6UQ17 1335 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ano10Q8BH79 659 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Dnajc5gQ8C632 165 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Shtn1Q8K2Q9 631 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 MthfsQ9D110 203 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Dact3Q0PHV7 610 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Brd3Q8K2F0 726 aaKnown RBP15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Fam213aQ9CYH2 218 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Card10P58660 1021 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Cep135Q6P5D4 1140 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Als2cr12Q8BVM7 383 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ttc12Q8BW49 704 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Skor1Q8BX46 964 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Tceanc2Q8R2M0 207 aa15.13■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Neurog2P70447 263 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Ift88Q61371 824 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 Sass6Q80UK7 654 aa15.12■□□□□ 0.01
Rnf40-202ENSMUST00000205694 SfpqQ8VIJ6 699 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms