RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W NSG2P53898 299 aa6.26□□□□□ -1.41
RPN7YPR108W NIS1P53939 407 aa6.26□□□□□ -1.41
RPN7YPR108W ORC4P54791 529 aa6.26□□□□□ -1.41
RPN7YPR108W RPA49Q01080 415 aaPredicted RBP6.26□□□□□ -1.41
RPN7YPR108W VTI1Q04338 217 aa6.26□□□□□ -1.41
RPN7YPR108W YMR114CQ04471 368 aaKnown RBP6.26□□□□□ -1.41
RPN7YPR108W SPH1Q06160 661 aa6.26□□□□□ -1.41
RPN7YPR108W ISA1Q07821 250 aaPredicted RBP6.26□□□□□ -1.41
RPN7YPR108W TY3A-GQ12173 290 aa6.26□□□□□ -1.41
RPN7YPR108W MCM16Q12262 181 aa6.26□□□□□ -1.41
RPN7YPR108W RKM4Q12504 494 aa6.26□□□□□ -1.41
RPN7YPR108W CSR2Q12734 1121 aa6.26□□□□□ -1.41
RPN7YPR108W TY3A-IQ99219 290 aa6.26□□□□□ -1.41
RPN7YPR108W FLO1P32768 1537 aa6.25□□□□□ -1.41
RPN7YPR108W TOM70P07213 617 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W CDC33P07260 213 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W PPR1P07272 904 aaPredicted RBP6.25□□□□□ -1.41
RPN7YPR108W PMS1P14242 873 aa6.25□□□□□ -1.41
RPN7YPR108W PKC1P24583 1151 aa6.25□□□□□ -1.41
RPN7YPR108W YSC83P32792 385 aa6.25□□□□□ -1.41
RPN7YPR108W MCR1P36060 302 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W PXL1P36166 706 aa6.25□□□□□ -1.41
RPN7YPR108W PIH1P38768 344 aa6.25□□□□□ -1.41
RPN7YPR108W UTP7P40055 554 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W FTR1P40088 404 aa6.25□□□□□ -1.41
RPN7YPR108W FIS1P40515 155 aa6.25□□□□□ -1.41
RPN7YPR108W RRN7P40992 514 aa6.25□□□□□ -1.41
RPN7YPR108W SCD6P45978 349 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41 RIP-Chip
RPN7YPR108W JJJ3P47138 172 aa6.25□□□□□ -1.41
RPN7YPR108W UBP15P50101 1230 aa6.25□□□□□ -1.41
RPN7YPR108W KAP114P53067 1004 aa6.25□□□□□ -1.41
RPN7YPR108W BTN2P53286 410 aa6.25□□□□□ -1.41
RPN7YPR108W VTC3Q02725 835 aa6.25□□□□□ -1.41
RPN7YPR108W YML020WQ03722 664 aa6.25□□□□□ -1.41
RPN7YPR108W POB3Q04636 552 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W YDL073WQ07454 984 aa6.25□□□□□ -1.41
RPN7YPR108W NOP6Q07623 225 aaKnown RBP6.25□□□□□ -1.41
RPN7YPR108W PMD1P32634 1753 aa6.25□□□□□ -1.41
RPN7YPR108W SPO16P17122 198 aa6.24□□□□□ -1.41
RPN7YPR108W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
RPN7YPR108W CLB1P24868 471 aa6.24□□□□□ -1.41
RPN7YPR108W CDC48P25694 835 aaKnown RBP6.24□□□□□ -1.41
RPN7YPR108W KIP1P28742 1111 aa6.24□□□□□ -1.41
RPN7YPR108W TFC4P33339 1025 aa6.24□□□□□ -1.41
RPN7YPR108W MUD2P36084 527 aaKnown RBP6.24□□□□□ -1.41
RPN7YPR108W BSD2P38356 321 aa6.24□□□□□ -1.41
RPN7YPR108W KEL1P38853 1164 aaKnown RBP6.24□□□□□ -1.41
RPN7YPR108W SEC9P40357 651 aa6.24□□□□□ -1.41
RPN7YPR108W IES1P43579 692 aa6.24□□□□□ -1.41
RPN7YPR108W HOP2P53187 214 aa6.24□□□□□ -1.41
RPN7YPR108W LSC2P53312 427 aa6.24□□□□□ -1.41
RPN7YPR108W PTA1Q01329 785 aaPredicted RBP6.24□□□□□ -1.41
RPN7YPR108W TFB3Q03290 321 aa6.24□□□□□ -1.41
RPN7YPR108W STE20Q03497 939 aaKnown RBP6.24□□□□□ -1.41
RPN7YPR108W RRB1Q04225 511 aaKnown RBP6.24□□□□□ -1.41
RPN7YPR108W SOV1Q04748 898 aa6.24□□□□□ -1.41
RPN7YPR108W STE23Q06010 1027 aa6.24□□□□□ -1.41
RPN7YPR108W SEY1Q99287 776 aa6.24□□□□□ -1.41
RPN7YPR108W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41 RIP-Chip
RPN7YPR108W MRPL25P23369 157 aa6.23□□□□□ -1.41
RPN7YPR108W RME1P32338 300 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W SPT16P32558 1035 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W RPC25P35718 212 aa6.23□□□□□ -1.41
RPN7YPR108W YEL025CP39991 1188 aa6.23□□□□□ -1.41
RPN7YPR108W GPD2P41911 440 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W HFM1P51979 1187 aa6.23□□□□□ -1.41
RPN7YPR108W NBP1P52919 319 aaPredicted RBP6.23□□□□□ -1.41
RPN7YPR108W YNL247WP53852 767 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W BOP3P53958 396 aa6.23□□□□□ -1.41
RPN7YPR108W TIM8P57744 87 aa6.23□□□□□ -1.41
RPN7YPR108W NGL3Q03210 505 aa6.23□□□□□ -1.41
RPN7YPR108W ATG16Q03818 150 aa6.23□□□□□ -1.41
RPN7YPR108W CSR1Q06705 408 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W VHS3Q08438 674 aa6.23□□□□□ -1.41
RPN7YPR108W TYW1Q08960 810 aaKnown RBP6.23□□□□□ -1.41
RPN7YPR108W CWC2Q12046 339 aaPredicted RBP6.23□□□□□ -1.41
RPN7YPR108W CFT2Q12102 859 aaPredicted RBP6.23□□□□□ -1.41
RPN7YPR108W YLL058WQ12198 575 aa6.23□□□□□ -1.41
RPN7YPR108W THS1P04801 734 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W SSA1P10591 642 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W SUP45P12385 437 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W AFT1P22149 690 aa6.22□□□□□ -1.41
RPN7YPR108W VMA4P22203 233 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W PRP22P24384 1145 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W RAD57P25301 460 aa6.22□□□□□ -1.41
RPN7YPR108W DBF4P32325 704 aa6.22□□□□□ -1.41
RPN7YPR108W MUD1P32605 298 aaKnown RBP6.22□□□□□ -1.41
RPN7YPR108W YME1P32795 747 aa6.22□□□□□ -1.41
RPN7YPR108W PIN4P34217 668 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
RPN7YPR108W TRZ1P36159 838 aaPredicted RBP6.22□□□□□ -1.41
RPN7YPR108W ERG7P38604 731 aa6.22□□□□□ -1.41
RPN7YPR108W SMF1P38925 575 aa6.22□□□□□ -1.41
RPN7YPR108W PMC1P38929 1173 aaPredicted RBP6.22□□□□□ -1.41
RPN7YPR108W NPP2P39997 493 aa6.22□□□□□ -1.41
RPN7YPR108W INA22P40576 216 aa6.22□□□□□ -1.41
RPN7YPR108W YJR039WP47107 1121 aa6.22□□□□□ -1.41
RPN7YPR108W NOC3Q07896 663 aaPredicted RBP6.22□□□□□ -1.41
RPN7YPR108W SDH5Q08230 162 aa6.22□□□□□ -1.41
RPN7YPR108W YDL176WQ12027 708 aa6.22□□□□□ -1.41
RPN7YPR108W RPS3P05750 240 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms