RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	RIP-Chip
SNT309	YPR101W	ECM2	P38241	364 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	TIF5	P38431	405 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	INA22	P40576	216 aa		7.35	□□□□□ -1.23
SNT309	YPR101W	BRE2	P43132	505 aa		7.35	□□□□□ -1.23
SNT309	YPR101W	CPR6	P53691	371 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	SPC24	Q04477	213 aa		7.35	□□□□□ -1.23
SNT309	YPR101W	DPL1	Q05567	589 aa		7.35	□□□□□ -1.23
SNT309	YPR101W	CMS1	Q07897	291 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	NOB1	Q08444	459 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	PUS1	Q12211	544 aa	Known RBP	7.35	□□□□□ -1.23
SNT309	YPR101W	SRD1	P09007	221 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	PEP5	P12868	1029 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	POL3	P15436	1097 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	PRP22	P24384	1145 aa	Known RBP	7.34	□□□□□ -1.23
SNT309	YPR101W	SWI3	P32591	825 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	FMS1	P50264	508 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	CNM67	P53865	581 aa	Known RBP	7.34	□□□□□ -1.23
SNT309	YPR101W	ORC4	P54791	529 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	SHR3	Q02774	210 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	VPS16	Q03308	798 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	TAF9	Q05027	157 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	FAR8	Q05040	523 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	PNP1	Q05788	311 aa		7.34	□□□□□ -1.23
SNT309	YPR101W	KRS1	P15180	591 aa	Known RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	SRV2	P17555	526 aa	Known RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	KIP1	P28742	1111 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	UGA4	P32837	571 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	YEL1	P34225	687 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	TRZ1	P36159	838 aa	Predicted RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	UBP13	P38187	747 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	SLI15	P38283	698 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	RRT2	P38332	387 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	TMA22	P47089	198 aa	Predicted RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	BRO1	P48582	844 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	SUB1	P54000	292 aa	Known RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	YPL062W	Q02781	134 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	PRP3	Q03338	469 aa	Predicted RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	DON1	Q05610	365 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	MAG2	Q06436	670 aa	Known RBP	7.33	□□□□□ -1.24
SNT309	YPR101W	TY4A-H	Q6Q5P6	413 aa		7.33	□□□□□ -1.24
SNT309	YPR101W	CLN3	P13365	580 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	CHS2	P14180	963 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	SPO16	P17122	198 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	RAM1	P22007	431 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	ADP1	P25371	1049 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	GCD6	P32501	712 aa	Known RBP	7.32	□□□□□ -1.24
SNT309	YPR101W	YKL222C	P35995	705 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	PGM2	P37012	569 aa	Known RBP	7.32	□□□□□ -1.24
SNT309	YPR101W	YBL028C	P38202	106 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	END3	P39013	349 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	KAP123	P40069	1113 aa	Known RBP	7.32	□□□□□ -1.24
SNT309	YPR101W	LCB2	P40970	561 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	GPD2	P41911	440 aa	Known RBP	7.32	□□□□□ -1.24
SNT309	YPR101W	TDA10	P42938	290 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	TIM8	P57744	87 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	GTR1	Q00582	310 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	ATG16	Q03818	150 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	YLR177W	Q06251	628 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.32	□□□□□ -1.24	not detected
SNT309	YPR101W	GYP1	Q08484	637 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	ARP6	Q12509	438 aa		7.32	□□□□□ -1.24
SNT309	YPR101W	CDC33	P07260	213 aa	Known RBP	7.31	□□□□□ -1.24
SNT309	YPR101W	DBF4	P32325	704 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	SUV3	P32580	737 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	YBR062C	P38239	180 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	SIC1	P38634	284 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	NDT80	P38830	627 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	RPN3	P40016	523 aa	Known RBP	7.31	□□□□□ -1.24
SNT309	YPR101W	MDR1	P53258	950 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	SOL4	P53315	255 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	DIP5	P53388	608 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
SNT309	YPR101W	ERV41	Q04651	352 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	LAP2	Q10740	671 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	RKM4	Q12504	494 aa		7.31	□□□□□ -1.24
SNT309	YPR101W	PGK1	P00560	416 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	PMA1	P05030	918 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	SUP45	P12385	437 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	TCP1	P12612	559 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	KAR3	P17119	729 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	PRP4	P20053	465 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	CAP1	P28495	268 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	YSC83	P32792	385 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	AFG2	P32794	780 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	EXO5	P38289	585 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	MSG5	P38590	489 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	TIF4631	P39935	952 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	YTA12	P40341	825 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	ULP2	P40537	1034 aa	Predicted RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	VPS70	P47161	811 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	YGR111W	P53265	400 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	ALD6	P54115	500 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	TMA64	Q04600	565 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	CRF1	Q04930	467 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	PHM6	Q05637	104 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	WHI4	Q07655	649 aa	Known RBP	7.3	□□□□□ -1.24
SNT309	YPR101W	YDL206W	Q12424	762 aa		7.3	□□□□□ -1.24
SNT309	YPR101W	ESS1	P22696	170 aa		7.29	□□□□□ -1.24
SNT309	YPR101W	SEC14	P24280	304 aa	Known RBP	7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 94 ms