RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C PTC5Q12511 572 aa2.64□□□□□ -1.99
ATG11YPR049C AAR2P32357 355 aaPredicted RBP2.63□□□□□ -1.99
ATG11YPR049C FLR1P38124 548 aa2.63□□□□□ -1.99
ATG11YPR049C SYT1Q06836 1226 aa2.63□□□□□ -1.99
ATG11YPR049C TY1B-AO13527 1196 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C MMF1P40185 145 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C YGL039WP53183 348 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C GDE1Q02979 1223 aa2.63□□□□□ -1.99
ATG11YPR049C RRD2Q12461 358 aa2.63□□□□□ -1.99
ATG11YPR049C CYC7P00045 113 aa2.63□□□□□ -1.99
ATG11YPR049C APE1P14904 514 aa2.63□□□□□ -1.99
ATG11YPR049C BET2P20133 325 aa2.63□□□□□ -1.99
ATG11YPR049C RFA1P22336 621 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C KTR2P33550 425 aa2.63□□□□□ -1.99
ATG11YPR049C RVS167P39743 482 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C INM2Q05533 292 aa2.63□□□□□ -1.99
ATG11YPR049C TDA5Q06417 326 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C VIP1Q06685 1146 aaKnown RBP2.63□□□□□ -1.99
ATG11YPR049C WSC4P38739 605 aa2.62□□□□□ -1.99
ATG11YPR049C MMM1P41800 426 aa2.62□□□□□ -1.99
ATG11YPR049C LEM3P42838 414 aa2.62□□□□□ -1.99
ATG11YPR049C YPQ2Q06328 317 aa2.62□□□□□ -1.99
ATG11YPR049C RIP1P08067 215 aa2.62□□□□□ -1.99
ATG11YPR049C PCK1P10963 549 aa2.62□□□□□ -1.99
ATG11YPR049C NAM7P30771 971 aaKnown RBP2.62□□□□□ -1.99
ATG11YPR049C SRP40P32583 406 aaPredicted RBP2.62□□□□□ -1.99
ATG11YPR049C RAD24P32641 659 aa2.62□□□□□ -1.99
ATG11YPR049C GRX7P38068 203 aa2.62□□□□□ -1.99
ATG11YPR049C CCZ1P38273 704 aa2.62□□□□□ -1.99
ATG11YPR049C MCD1Q12158 566 aa2.62□□□□□ -1.99
ATG11YPR049C RAD61Q99359 647 aa2.62□□□□□ -1.99
ATG11YPR049C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
ATG11YPR049C APL1P27351 700 aa2.62□□□□□ -1.99
ATG11YPR049C MYO3P36006 1272 aa2.62□□□□□ -1.99
ATG11YPR049C MRPL7P36519 292 aa2.62□□□□□ -1.99
ATG11YPR049C KTR3P38130 404 aaPredicted RBP2.62□□□□□ -1.99
ATG11YPR049C YLR257WQ06146 321 aaKnown RBP2.62□□□□□ -1.99
ATG11YPR049C CDC53Q12018 815 aaKnown RBP2.62□□□□□ -1.99
ATG11YPR049C SUV3P32580 737 aa2.61□□□□□ -1.99
ATG11YPR049C POL12P38121 705 aaPredicted RBP2.61□□□□□ -1.99
ATG11YPR049C PTC7P38797 343 aa2.61□□□□□ -1.99
ATG11YPR049C YPT35P38815 214 aaKnown RBP2.61□□□□□ -1.99
ATG11YPR049C YJR124CP47159 448 aa2.61□□□□□ -1.99
ATG11YPR049C MSC2Q03455 724 aa2.61□□□□□ -1.99
ATG11YPR049C HIS5P07172 385 aa2.61□□□□□ -1.99
ATG11YPR049C RAD2P07276 1031 aa2.61□□□□□ -1.99
ATG11YPR049C BUD2P33314 1104 aa2.61□□□□□ -1.99
ATG11YPR049C NUP133P36161 1157 aa2.61□□□□□ -1.99
ATG11YPR049C TIM54P47045 478 aa2.61□□□□□ -1.99
ATG11YPR049C VPS53P47061 822 aa2.61□□□□□ -1.99
ATG11YPR049C JJJ3P47138 172 aa2.61□□□□□ -1.99
ATG11YPR049C GUP1P53154 560 aa2.61□□□□□ -1.99
ATG11YPR049C BUL2Q03758 920 aaKnown RBP2.61□□□□□ -1.99
ATG11YPR049C SPO21Q12411 609 aa2.61□□□□□ -1.99
ATG11YPR049C KIN2P13186 1147 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C PPG1P32838 368 aa2.6□□□□□ -1.99
ATG11YPR049C PIP2P52960 996 aa2.6□□□□□ -1.99
ATG11YPR049C SPR28Q04921 423 aa2.6□□□□□ -1.99
ATG11YPR049C DUS3Q06053 668 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C SNU66Q12420 587 aaPredicted RBP2.6□□□□□ -1.99
ATG11YPR049C ARE1P25628 610 aa2.6□□□□□ -1.99
ATG11YPR049C SLA1P32790 1244 aa2.6□□□□□ -1.99
ATG11YPR049C ALD5P40047 520 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C INP51P40559 946 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C PKH1Q03407 766 aa2.6□□□□□ -1.99
ATG11YPR049C RSM24Q03976 319 aa2.6□□□□□ -1.99
ATG11YPR049C HCR1Q05775 265 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C MCA1Q08601 432 aa2.6□□□□□ -1.99
ATG11YPR049C KEL3Q08979 651 aaPredicted RBP2.6□□□□□ -1.99
ATG11YPR049C KRS1P15180 591 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C SRP54P20424 541 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C ADE2P21264 571 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C YHL012WP38709 493 aa2.6□□□□□ -1.99
ATG11YPR049C MOB1P40484 314 aa2.6□□□□□ -1.99
ATG11YPR049C PAP2P53632 584 aaKnown RBP2.6□□□□□ -1.99
ATG11YPR049C MED7Q08278 222 aa2.6□□□□□ -1.99
ATG11YPR049C RPS4AP0CX35 261 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C RPS4BP0CX36 261 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C CDC48P25694 835 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C RPT3P33298 428 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C HMT1P38074 348 aa2.59□□□□□ -1.99
ATG11YPR049C MDJ2P42834 146 aa2.59□□□□□ -1.99
ATG11YPR049C EMG1Q06287 252 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C NAR1P23503 491 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C YKL091CP33324 310 aaKnown RBP2.59□□□□□ -1.99
ATG11YPR049C YBR284WP38150 797 aa2.59□□□□□ -1.99
ATG11YPR049C RTS1P38903 757 aa2.59□□□□□ -1.99
ATG11YPR049C SLN1P39928 1220 aaPredicted RBP2.59□□□□□ -1.99
ATG11YPR049C SGM1P47166 707 aa2.59□□□□□ -1.99
ATG11YPR049C FRT1Q99332 602 aa2.59□□□□□ -1.99
ATG11YPR049C MSB1P21339 1137 aaKnown RBP2.59□□□□□ -2
ATG11YPR049C MSH3P25336 1018 aa2.59□□□□□ -2
ATG11YPR049C CHS3P29465 1165 aa2.59□□□□□ -2
ATG11YPR049C YKL097CP34245 136 aa2.59□□□□□ -2
ATG11YPR049C YKL107WP34251 309 aa2.59□□□□□ -2
ATG11YPR049C YHR202WP38887 602 aa2.59□□□□□ -2
ATG11YPR049C YNR061CP53747 219 aa2.59□□□□□ -2
ATG11YPR049C SDH1Q00711 640 aa2.59□□□□□ -2
ATG11YPR049C GIS4Q04233 774 aa2.59□□□□□ -2
ATG11YPR049C CLF1Q12309 687 aaPredicted RBP2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms