RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W SNU56Q03782 492 aaKnown RBP11.21□□□□□ -0.61
MSF1YPR047W GAL80P04387 435 aa11.2□□□□□ -0.62
MSF1YPR047W ASP3-2P0CX77 362 aa11.2□□□□□ -0.62
MSF1YPR047W ASP3-3P0CX78 362 aa11.2□□□□□ -0.62
MSF1YPR047W ASP3-4P0CX79 362 aa11.2□□□□□ -0.62
MSF1YPR047W ASP3-1P0CZ17 362 aa11.2□□□□□ -0.62
MSF1YPR047W VMA1P17255 1071 aaKnown RBP11.2□□□□□ -0.62
MSF1YPR047W VPS3P23643 1011 aa11.2□□□□□ -0.62
MSF1YPR047W YHR054CP38780 354 aa11.2□□□□□ -0.62
MSF1YPR047W NPP2P39997 493 aa11.2□□□□□ -0.62
MSF1YPR047W YTA12P40341 825 aa11.2□□□□□ -0.62
MSF1YPR047W FYV8P46949 817 aaKnown RBP11.2□□□□□ -0.62
MSF1YPR047W BFA1P47113 574 aa11.2□□□□□ -0.62
MSF1YPR047W HSH155P49955 971 aaKnown RBP11.2□□□□□ -0.62
MSF1YPR047W ADA2Q02336 434 aa11.2□□□□□ -0.62
MSF1YPR047W CDC15P27636 974 aa11.19□□□□□ -0.62
MSF1YPR047W MUD1P32605 298 aaKnown RBP11.19□□□□□ -0.62
MSF1YPR047W YBR284WP38150 797 aa11.19□□□□□ -0.62
MSF1YPR047W UBP5P39944 805 aa11.19□□□□□ -0.62
MSF1YPR047W POL31P46957 487 aa11.19□□□□□ -0.62
MSF1YPR047W BIO5P53744 561 aaKnown RBP11.19□□□□□ -0.62
MSF1YPR047W PML39Q03760 334 aa11.19□□□□□ -0.62
MSF1YPR047W SGT2Q12118 346 aaKnown RBP11.19□□□□□ -0.62
MSF1YPR047W APM4Q99186 491 aa11.19□□□□□ -0.62
MSF1YPR047W RAM1P22007 431 aa11.18□□□□□ -0.62
MSF1YPR047W PDE1P22434 369 aa11.18□□□□□ -0.62
MSF1YPR047W COY1P34237 679 aa11.18□□□□□ -0.62
MSF1YPR047W BIM1P40013 344 aa11.18□□□□□ -0.62
MSF1YPR047W CDD1Q06549 142 aa11.18□□□□□ -0.62
MSF1YPR047W SPO11P23179 398 aa11.18□□□□□ -0.62
MSF1YPR047W RFT1P38206 574 aaPredicted RBP11.18□□□□□ -0.62
MSF1YPR047W TCO89Q08921 799 aa11.18□□□□□ -0.62
MSF1YPR047W TRK2P28584 889 aa11.17□□□□□ -0.62
MSF1YPR047W RGD1P38339 666 aa11.17□□□□□ -0.62
MSF1YPR047W LSB6P42951 607 aa11.17□□□□□ -0.62
MSF1YPR047W NOP13P53883 403 aaKnown RBP RIP-Chip data11.17□□□□□ -0.62not detected
MSF1YPR047W LEE1Q02799 301 aaKnown RBP11.17□□□□□ -0.62
MSF1YPR047W NSE5Q03718 556 aa11.17□□□□□ -0.62
MSF1YPR047W TIF35Q04067 274 aaKnown RBP11.17□□□□□ -0.62
MSF1YPR047W PEX34P25584 144 aa11.16□□□□□ -0.62
MSF1YPR047W PEP7P32609 515 aa11.16□□□□□ -0.62
MSF1YPR047W PTC4P38089 393 aa11.16□□□□□ -0.62
MSF1YPR047W YCK3P39962 524 aa11.16□□□□□ -0.62
MSF1YPR047W LCB2P40970 561 aa11.16□□□□□ -0.62
MSF1YPR047W TAF1P46677 1066 aa11.16□□□□□ -0.62
MSF1YPR047W SLG1P54867 378 aa11.16□□□□□ -0.62
MSF1YPR047W DON1Q05610 365 aa11.16□□□□□ -0.62
MSF1YPR047W LEA1Q08963 238 aaPredicted RBP11.16□□□□□ -0.62
MSF1YPR047W MED1Q12321 566 aa11.16□□□□□ -0.62
MSF1YPR047W PIN4P34217 668 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
MSF1YPR047W HXT5P38695 592 aa11.15□□□□□ -0.62
MSF1YPR047W ARP1P38696 384 aa11.15□□□□□ -0.62
MSF1YPR047W YIR014WP40570 242 aa11.15□□□□□ -0.62
MSF1YPR047W HRQ1Q05549 1077 aa11.15□□□□□ -0.62
MSF1YPR047W FMP25Q08023 583 aa11.15□□□□□ -0.62
MSF1YPR047W TLG2Q08144 397 aa11.15□□□□□ -0.62
MSF1YPR047W NAT1P12945 854 aaKnown RBP11.14□□□□□ -0.63
MSF1YPR047W SLA2P33338 968 aa11.14□□□□□ -0.63
MSF1YPR047W TBS1P38114 1094 aa11.14□□□□□ -0.63
MSF1YPR047W LAA1P39526 2014 aa11.14□□□□□ -0.63
MSF1YPR047W FTR1P40088 404 aa11.13□□□□□ -0.63
MSF1YPR047W DAS1P47005 663 aa11.13□□□□□ -0.63
MSF1YPR047W MLH2Q07980 695 aa11.13□□□□□ -0.63
MSF1YPR047W YPL216WQ08964 1102 aa11.13□□□□□ -0.63
MSF1YPR047W SPE3Q12074 293 aaKnown RBP11.13□□□□□ -0.63
MSF1YPR047W TPK1P06244 397 aa11.12□□□□□ -0.63
MSF1YPR047W SIS1P25294 352 aaKnown RBP11.12□□□□□ -0.63
MSF1YPR047W TIM8P57744 87 aa11.12□□□□□ -0.63
MSF1YPR047W HRT3Q12347 344 aa11.12□□□□□ -0.63
MSF1YPR047W HIS5P07172 385 aa11.11□□□□□ -0.63
MSF1YPR047W CHS2P14180 963 aa11.11□□□□□ -0.63
MSF1YPR047W SGF29P25554 259 aa11.11□□□□□ -0.63
MSF1YPR047W YKL091CP33324 310 aaKnown RBP11.11□□□□□ -0.63
MSF1YPR047W TOS3P43637 560 aa11.11□□□□□ -0.63
MSF1YPR047W RLP24Q07915 199 aaKnown RBP11.11□□□□□ -0.63
MSF1YPR047W TAF10Q12030 206 aa11.11□□□□□ -0.63
MSF1YPR047W AGP2P38090 596 aa11.1□□□□□ -0.63
MSF1YPR047W TGL3P40308 642 aa11.1□□□□□ -0.63
MSF1YPR047W VPS25P47142 202 aa11.1□□□□□ -0.63
MSF1YPR047W ALT1P52893 592 aa11.1□□□□□ -0.63
MSF1YPR047W PEX19Q07418 342 aa11.1□□□□□ -0.63
MSF1YPR047W RPL22AP05749 121 aaKnown RBP11.09□□□□□ -0.63
MSF1YPR047W SAC6P32599 642 aaKnown RBP11.09□□□□□ -0.63
MSF1YPR047W SHE3P38272 425 aaKnown RBP11.09□□□□□ -0.63
MSF1YPR047W SMC3P47037 1230 aa11.09□□□□□ -0.63
MSF1YPR047W SFB2P53953 876 aa11.09□□□□□ -0.63
MSF1YPR047W SIF2P38262 535 aa11.09□□□□□ -0.63
MSF1YPR047W SFB3P38810 929 aa11.09□□□□□ -0.63
MSF1YPR047W PSP1P50896 841 aaKnown RBP11.09□□□□□ -0.63
MSF1YPR047W TBF1Q02457 562 aa11.09□□□□□ -0.63
MSF1YPR047W YPR027CQ12079 277 aa11.09□□□□□ -0.63
MSF1YPR047W CHS1P08004 1131 aa11.08□□□□□ -0.64
MSF1YPR047W OM45P16547 393 aa11.08□□□□□ -0.64
MSF1YPR047W IME1P21190 360 aa11.08□□□□□ -0.64
MSF1YPR047W SWI3P32591 825 aa11.08□□□□□ -0.64
MSF1YPR047W KDX1P36005 433 aa11.08□□□□□ -0.64
MSF1YPR047W DUG2P38149 878 aa11.08□□□□□ -0.64
MSF1YPR047W YHM2Q04013 314 aa11.08□□□□□ -0.64
MSF1YPR047W NSE1Q07913 336 aa11.08□□□□□ -0.64
MSF1YPR047W RPS14AP06367 137 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms