RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C CTF4Q01454 927 aa5.36□□□□□ -1.55
SNF8YPL002C RMT2Q03305 412 aa5.36□□□□□ -1.55
SNF8YPL002C HRQ1Q05549 1077 aa5.36□□□□□ -1.55
SNF8YPL002C YLR225CQ05948 407 aaKnown RBP5.36□□□□□ -1.55
SNF8YPL002C ESC2Q06340 456 aa5.36□□□□□ -1.55
SNF8YPL002C ENA1P13587 1091 aa5.35□□□□□ -1.55
SNF8YPL002C PMI40P29952 429 aaKnown RBP5.35□□□□□ -1.55
SNF8YPL002C HSP104P31539 908 aaKnown RBP5.35□□□□□ -1.55
SNF8YPL002C DCG1P32460 244 aa5.35□□□□□ -1.55
SNF8YPL002C YKL107WP34251 309 aa5.35□□□□□ -1.55
SNF8YPL002C POA1P38218 177 aa5.35□□□□□ -1.55
SNF8YPL002C YAP1801P38856 637 aa5.35□□□□□ -1.55
SNF8YPL002C MET12P46151 657 aa5.35□□□□□ -1.55
SNF8YPL002C ENA2Q01896 1091 aa5.35□□□□□ -1.55
SNF8YPL002C TAP42Q04372 366 aa5.35□□□□□ -1.55
SNF8YPL002C DIB1Q06819 143 aaPredicted RBP5.35□□□□□ -1.55
SNF8YPL002C BDF2Q07442 638 aa5.35□□□□□ -1.55
SNF8YPL002C GRX6Q12438 231 aa5.35□□□□□ -1.55
SNF8YPL002C ENA5Q12691 1091 aa5.35□□□□□ -1.55
SNF8YPL002C YML133CQ03099 1374 aa5.34□□□□□ -1.55
SNF8YPL002C YIL089WP40500 205 aa5.34□□□□□ -1.55
SNF8YPL002C AIM21P40563 679 aa5.34□□□□□ -1.55
SNF8YPL002C YFR016CP43597 1233 aaKnown RBP5.34□□□□□ -1.55
SNF8YPL002C GIS1Q03833 894 aa5.34□□□□□ -1.55
SNF8YPL002C OSW2Q12202 724 aa5.34□□□□□ -1.55
SNF8YPL002C HIS5P07172 385 aa5.33□□□□□ -1.56
SNF8YPL002C HIM1Q06674 414 aa5.33□□□□□ -1.56
SNF8YPL002C MDM38Q08179 573 aa5.33□□□□□ -1.56
SNF8YPL002C NUP145P49687 1317 aa5.32□□□□□ -1.56
SNF8YPL002C CAF20P12962 161 aaKnown RBP5.32□□□□□ -1.56
SNF8YPL002C MNR2P35724 969 aa5.32□□□□□ -1.56
SNF8YPL002C CHS7P38843 316 aa5.32□□□□□ -1.56
SNF8YPL002C PEA2P40091 420 aa5.32□□□□□ -1.56
SNF8YPL002C CHA4P43634 648 aa5.32□□□□□ -1.56
SNF8YPL002C DSD1P53095 428 aa5.32□□□□□ -1.56
SNF8YPL002C CDA1Q06702 301 aa5.32□□□□□ -1.56
SNF8YPL002C SRP101P32916 621 aa5.31□□□□□ -1.56
SNF8YPL002C DEF1P35732 738 aaKnown RBP5.31□□□□□ -1.56
SNF8YPL002C GIC1P38785 314 aa5.31□□□□□ -1.56
SNF8YPL002C MSS4P38994 779 aa5.31□□□□□ -1.56
SNF8YPL002C FAA4P47912 694 aaKnown RBP5.31□□□□□ -1.56
SNF8YPL002C NCS6P53088 359 aa5.31□□□□□ -1.56
SNF8YPL002C YGL082WP53155 381 aa5.31□□□□□ -1.56
SNF8YPL002C YGR012WP53206 393 aa5.31□□□□□ -1.56
SNF8YPL002C YGR053CP53234 283 aa5.31□□□□□ -1.56
SNF8YPL002C TIM50Q02776 476 aa5.31□□□□□ -1.56
SNF8YPL002C SPO20Q04359 397 aa5.31□□□□□ -1.56
SNF8YPL002C TAD3Q9URQ3 322 aa5.31□□□□□ -1.56
SNF8YPL002C ABD1P32783 436 aaPredicted RBP5.3□□□□□ -1.56
SNF8YPL002C NPP2P39997 493 aa5.3□□□□□ -1.56
SNF8YPL002C SRT1Q03175 343 aa5.3□□□□□ -1.56
SNF8YPL002C YLL058WQ12198 575 aa5.3□□□□□ -1.56
SNF8YPL002C KCS1Q12494 1050 aa5.3□□□□□ -1.56
SNF8YPL002C AUS1Q08409 1394 aa5.29□□□□□ -1.56
SNF8YPL002C SPE1P08432 466 aa5.29□□□□□ -1.56
SNF8YPL002C ECM21P38167 1117 aaKnown RBP5.29□□□□□ -1.56
SNF8YPL002C EXG2P52911 562 aa5.29□□□□□ -1.56
SNF8YPL002C SSP2Q08646 371 aa5.29□□□□□ -1.56
SNF8YPL002C KCC4P25389 1037 aa5.28□□□□□ -1.56
SNF8YPL002C FRD1P32614 470 aaKnown RBP5.28□□□□□ -1.56
SNF8YPL002C PAP2P53632 584 aaKnown RBP5.28□□□□□ -1.56
SNF8YPL002C TRM44Q02648 567 aaKnown RBP5.28□□□□□ -1.56
SNF8YPL002C FUN30P31380 1131 aa5.27□□□□□ -1.57
SNF8YPL002C SAH1P39954 449 aaKnown RBP5.27□□□□□ -1.57
SNF8YPL002C YGR117CP53270 476 aa5.27□□□□□ -1.57
SNF8YPL002C ALE1Q08548 619 aa5.27□□□□□ -1.57
SNF8YPL002C PMD1P32634 1753 aa5.27□□□□□ -1.57
SNF8YPL002C PIN4P34217 668 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SNF8YPL002C PAM1P37304 830 aaKnown RBP5.26□□□□□ -1.57
SNF8YPL002C MBP1P39678 833 aa5.26□□□□□ -1.57
SNF8YPL002C SFB2P53953 876 aa5.26□□□□□ -1.57
SNF8YPL002C GDE1Q02979 1223 aa5.26□□□□□ -1.57
SNF8YPL002C SYF1Q04048 859 aaPredicted RBP5.26□□□□□ -1.57
SNF8YPL002C CRF1Q04930 467 aa5.26□□□□□ -1.57
SNF8YPL002C WHI4Q07655 649 aaKnown RBP5.26□□□□□ -1.57
SNF8YPL002C LAS17Q12446 633 aa5.26□□□□□ -1.57
SNF8YPL002C HSF1P10961 833 aa5.25□□□□□ -1.57
SNF8YPL002C PFK1P16861 987 aaKnown RBP5.25□□□□□ -1.57
SNF8YPL002C HPR1P17629 752 aaKnown RBP5.25□□□□□ -1.57
SNF8YPL002C AKL1P38080 1108 aaKnown RBP5.25□□□□□ -1.57
SNF8YPL002C CCC2P38995 1004 aa5.25□□□□□ -1.57
SNF8YPL002C IOC3P43596 787 aa5.25□□□□□ -1.57
SNF8YPL002C RRT6P53117 311 aaPredicted RBP5.25□□□□□ -1.57
SNF8YPL002C NPC2Q12408 173 aa5.25□□□□□ -1.57
SNF8YPL002C UTP10P42945 1769 aaKnown RBP5.24□□□□□ -1.57
SNF8YPL002C HRR25P29295 494 aaKnown RBP5.24□□□□□ -1.57
SNF8YPL002C CDC12P32468 407 aaKnown RBP5.24□□□□□ -1.57
SNF8YPL002C CSR2Q12734 1121 aa5.24□□□□□ -1.57
SNF8YPL002C YPR117WQ06116 2489 aa5.23□□□□□ -1.57
SNF8YPL002C RPP2AP05319 106 aaKnown RBP5.23□□□□□ -1.57
SNF8YPL002C RAD53P22216 821 aa5.23□□□□□ -1.57
SNF8YPL002C URM1P40554 99 aaPredicted RBP5.23□□□□□ -1.57
SNF8YPL002C PSP2P50109 593 aaKnown RBP5.23□□□□□ -1.57
SNF8YPL002C VPS4P52917 437 aa5.23□□□□□ -1.57
SNF8YPL002C TAO3P40468 2376 aa5.22□□□□□ -1.57
SNF8YPL002C APE3P37302 537 aaKnown RBP5.22□□□□□ -1.57
SNF8YPL002C SNF7P39929 240 aaKnown RBP5.22□□□□□ -1.57
SNF8YPL002C UBP16Q02863 499 aa5.22□□□□□ -1.57
SNF8YPL002C NSE3Q05541 303 aa5.22□□□□□ -1.57
SNF8YPL002C FAL1Q12099 399 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms