RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W SRP40P32583 406 aaPredicted RBP3.6□□□□□ -1.83
PEP12YOR036W BRN1P38170 754 aa3.6□□□□□ -1.83
PEP12YOR036W TOK1P40310 691 aa3.6□□□□□ -1.83
PEP12YOR036W SGO1Q08490 590 aa3.6□□□□□ -1.83
PEP12YOR036W CIT2P08679 460 aa3.59□□□□□ -1.83
PEP12YOR036W GRX1P25373 110 aaKnown RBP3.59□□□□□ -1.83
PEP12YOR036W EMP70P32802 667 aa3.59□□□□□ -1.83
PEP12YOR036W YKL091CP33324 310 aaKnown RBP3.59□□□□□ -1.83
PEP12YOR036W CBR1P38626 284 aaKnown RBP3.59□□□□□ -1.83
PEP12YOR036W SPF1P39986 1215 aaKnown RBP3.59□□□□□ -1.83
PEP12YOR036W YIR042CP40586 236 aa3.59□□□□□ -1.83
PEP12YOR036W BUD6P41697 788 aa3.59□□□□□ -1.83
PEP12YOR036W CCM1P48237 864 aaPredicted RBP3.59□□□□□ -1.83
PEP12YOR036W RNH70P53331 553 aa3.59□□□□□ -1.83
PEP12YOR036W PKH1Q03407 766 aa3.59□□□□□ -1.83
PEP12YOR036W ASM4Q05166 528 aa3.59□□□□□ -1.83
PEP12YOR036W OPI10Q08202 246 aa3.59□□□□□ -1.83
PEP12YOR036W RRP14P36080 434 aaKnown RBP3.58□□□□□ -1.84
PEP12YOR036W BCD1P38772 366 aa3.58□□□□□ -1.84
PEP12YOR036W CCT7P42943 550 aaKnown RBP3.58□□□□□ -1.84
PEP12YOR036W OSW7P43611 510 aa3.58□□□□□ -1.84
PEP12YOR036W SEC5P89102 971 aa3.58□□□□□ -1.84
PEP12YOR036W MUS81Q04149 632 aaPredicted RBP3.58□□□□□ -1.84
PEP12YOR036W HAL9Q12180 1030 aa3.58□□□□□ -1.84
PEP12YOR036W TAF3Q12297 353 aa3.58□□□□□ -1.84
PEP12YOR036W MPH2P0CD99 609 aa3.57□□□□□ -1.84
PEP12YOR036W PRI2P20457 528 aa3.57□□□□□ -1.84
PEP12YOR036W HBS1P32769 611 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W HIS7P33734 552 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W PBP2P38151 413 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
PEP12YOR036W YJL206CP39529 758 aa3.57□□□□□ -1.84
PEP12YOR036W FMP52P40008 231 aa3.57□□□□□ -1.84
PEP12YOR036W HOS4P40480 1083 aa3.57□□□□□ -1.84
PEP12YOR036W TEL2P53038 688 aa3.57□□□□□ -1.84
PEP12YOR036W DUS1P53759 423 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W SMX3P54999 86 aaPredicted RBP3.57□□□□□ -1.84
PEP12YOR036W SSL2Q00578 843 aa3.57□□□□□ -1.84
PEP12YOR036W NAN1Q02931 896 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W NRG1Q03125 231 aa3.57□□□□□ -1.84
PEP12YOR036W IOC4Q04213 475 aa3.57□□□□□ -1.84
PEP12YOR036W TDA5Q06417 326 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W CDC53Q12018 815 aaKnown RBP3.57□□□□□ -1.84
PEP12YOR036W RPS9AO13516 197 aaKnown RBP3.56□□□□□ -1.84
PEP12YOR036W YLR415CO13578 112 aa3.56□□□□□ -1.84
PEP12YOR036W LAT1P12695 482 aaKnown RBP3.56□□□□□ -1.84
PEP12YOR036W DMC1P25453 334 aa3.56□□□□□ -1.84
PEP12YOR036W HSV2P50079 448 aaPredicted RBP3.56□□□□□ -1.84
PEP12YOR036W HUL5P53119 910 aa3.56□□□□□ -1.84
PEP12YOR036W PUS2P53167 370 aa3.56□□□□□ -1.84
PEP12YOR036W APM1Q00776 475 aaPredicted RBP3.56□□□□□ -1.84
PEP12YOR036W LCD1Q04377 747 aa3.56□□□□□ -1.84
PEP12YOR036W MRI1Q06489 411 aaKnown RBP3.56□□□□□ -1.84
PEP12YOR036W TGL5Q12043 749 aa3.56□□□□□ -1.84
PEP12YOR036W YOR131CQ12486 218 aa3.56□□□□□ -1.84
PEP12YOR036W RAD4P14736 754 aa3.55□□□□□ -1.84
PEP12YOR036W SPO11P23179 398 aa3.55□□□□□ -1.84
PEP12YOR036W REC104P33323 182 aa3.55□□□□□ -1.84
PEP12YOR036W YHR020WP38708 688 aaKnown RBP3.55□□□□□ -1.84
PEP12YOR036W DAM1P53267 343 aa3.55□□□□□ -1.84
PEP12YOR036W ALG12P53730 551 aa3.55□□□□□ -1.84
PEP12YOR036W PPG1P32838 368 aa3.54□□□□□ -1.84
PEP12YOR036W MRP8P35719 219 aa3.54□□□□□ -1.84
PEP12YOR036W PBY1P38254 753 aa3.54□□□□□ -1.84
PEP12YOR036W FPR3P38911 411 aaKnown RBP3.54□□□□□ -1.84
PEP12YOR036W SAK1P38990 1142 aa3.54□□□□□ -1.84
PEP12YOR036W PZF1P39933 429 aa3.54□□□□□ -1.84
PEP12YOR036W PFA3P42836 336 aa3.54□□□□□ -1.84
PEP12YOR036W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
PEP12YOR036W UBC11P52492 156 aa3.54□□□□□ -1.84
PEP12YOR036W HIR1P32479 840 aa3.53□□□□□ -1.84
PEP12YOR036W STE5P32917 917 aa3.53□□□□□ -1.84
PEP12YOR036W UBS1P38290 277 aa3.53□□□□□ -1.84
PEP12YOR036W YEL020CP39994 560 aa3.53□□□□□ -1.84
PEP12YOR036W TIM54P47045 478 aa3.53□□□□□ -1.84
PEP12YOR036W TPO2P53283 614 aa3.53□□□□□ -1.84
PEP12YOR036W CYS3P31373 394 aaKnown RBP3.52□□□□□ -1.85
PEP12YOR036W NGG1P32494 702 aa3.52□□□□□ -1.85
PEP12YOR036W YBR184WP38299 523 aa3.52□□□□□ -1.85
PEP12YOR036W CHZ1P40019 153 aaPredicted RBP3.52□□□□□ -1.85
PEP12YOR036W NUP82P40368 713 aa3.52□□□□□ -1.85
PEP12YOR036W IRR1P40541 1150 aa3.52□□□□□ -1.85
PEP12YOR036W SSY5P47002 699 aa3.52□□□□□ -1.85
PEP12YOR036W ENV7Q12003 364 aa3.52□□□□□ -1.85
PEP12YOR036W YOR022CQ12204 715 aa3.52□□□□□ -1.85
PEP12YOR036W YPR071WQ12346 211 aa3.52□□□□□ -1.85
PEP12YOR036W GPR1Q12361 961 aa3.52□□□□□ -1.85
PEP12YOR036W RPL8BP29453 256 aaKnown RBP3.51□□□□□ -1.85
PEP12YOR036W ORC2P32833 620 aa3.51□□□□□ -1.85
PEP12YOR036W SIC1P38634 284 aa3.51□□□□□ -1.85
PEP12YOR036W NDC80P40460 691 aa3.51□□□□□ -1.85
PEP12YOR036W GAT1P43574 510 aa3.51□□□□□ -1.85
PEP12YOR036W PFD1P46988 109 aa3.51□□□□□ -1.85
PEP12YOR036W SCS3P53012 380 aa3.51□□□□□ -1.85
PEP12YOR036W RIM13Q03792 727 aa3.51□□□□□ -1.85
PEP12YOR036W FMP25Q08023 583 aa3.51□□□□□ -1.85
PEP12YOR036W FLC1Q08967 793 aa3.51□□□□□ -1.85
PEP12YOR036W TIM23P32897 222 aa3.5□□□□□ -1.85
PEP12YOR036W YBR284WP38150 797 aa3.5□□□□□ -1.85
PEP12YOR036W RSP5P39940 809 aaKnown RBP3.5□□□□□ -1.85
PEP12YOR036W BAP3P41815 604 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms