RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C HIS5P07172 385 aa3.99□□□□□ -1.77
HRD1YOL013C HSF1P10961 833 aa3.99□□□□□ -1.77
HRD1YOL013C DPB3P27344 201 aa3.99□□□□□ -1.77
HRD1YOL013C SCT1P32784 759 aa3.99□□□□□ -1.77
HRD1YOL013C HOS4P40480 1083 aa3.99□□□□□ -1.77
HRD1YOL013C GYP7P48365 746 aa3.99□□□□□ -1.77
HRD1YOL013C MCM6P53091 1017 aaKnown RBP3.99□□□□□ -1.77
HRD1YOL013C SPC105P53148 917 aa3.99□□□□□ -1.77
HRD1YOL013C SDA1P53313 767 aaKnown RBP3.99□□□□□ -1.77
HRD1YOL013C UBX4P54730 416 aa3.99□□□□□ -1.77
HRD1YOL013C YDR306CQ06640 478 aa3.99□□□□□ -1.77
HRD1YOL013C ERP4Q12450 207 aa3.99□□□□□ -1.77
HRD1YOL013C ADE8P04161 214 aa3.98□□□□□ -1.77
HRD1YOL013C APA1P16550 321 aaKnown RBP3.98□□□□□ -1.77
HRD1YOL013C PPH3P32345 308 aa3.98□□□□□ -1.77
HRD1YOL013C AAR2P32357 355 aaPredicted RBP3.98□□□□□ -1.77
HRD1YOL013C YKR078WP36158 585 aaKnown RBP3.98□□□□□ -1.77
HRD1YOL013C EXO84P38261 753 aa3.98□□□□□ -1.77
HRD1YOL013C CCC2P38995 1004 aa3.98□□□□□ -1.77
HRD1YOL013C PIP2P52960 996 aa3.98□□□□□ -1.77
HRD1YOL013C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
HRD1YOL013C MET14Q02196 202 aa3.98□□□□□ -1.77
HRD1YOL013C TMA10Q06177 86 aa3.98□□□□□ -1.77
HRD1YOL013C CDA1Q06702 301 aa3.98□□□□□ -1.77
HRD1YOL013C TUB2P02557 457 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C SRP101P32916 621 aa3.97□□□□□ -1.77
HRD1YOL013C ATG19P35193 415 aa3.97□□□□□ -1.77
HRD1YOL013C TYS1P36421 394 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C PLB1P39105 664 aa3.97□□□□□ -1.77
HRD1YOL013C DSS1P39112 969 aa3.97□□□□□ -1.77
HRD1YOL013C CHA4P43634 648 aa3.97□□□□□ -1.77
HRD1YOL013C YDL124WQ07551 312 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C HBN1Q96VH4 193 aa3.97□□□□□ -1.77
HRD1YOL013C GAL1P04385 528 aa3.97□□□□□ -1.77
HRD1YOL013C SPE1P08432 466 aa3.97□□□□□ -1.77
HRD1YOL013C PRP9P19736 530 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C HCM1P25364 564 aa3.97□□□□□ -1.77
HRD1YOL013C MFT1P33441 392 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C YER158CP40095 573 aa3.97□□□□□ -1.77
HRD1YOL013C ESF2P53743 316 aaKnown RBP3.97□□□□□ -1.77
HRD1YOL013C MDM1Q01846 1127 aa3.97□□□□□ -1.77
HRD1YOL013C YPR196WQ06595 470 aa3.97□□□□□ -1.77
HRD1YOL013C VBA3P25594 458 aa3.96□□□□□ -1.78
HRD1YOL013C HBS1P32769 611 aaKnown RBP3.96□□□□□ -1.78
HRD1YOL013C TOA1P32773 286 aa3.96□□□□□ -1.78
HRD1YOL013C YBR284WP38150 797 aa3.96□□□□□ -1.78
HRD1YOL013C NPP2P39997 493 aa3.96□□□□□ -1.78
HRD1YOL013C SFB2P53953 876 aa3.96□□□□□ -1.78
HRD1YOL013C MTQ2Q03920 221 aaPredicted RBP3.96□□□□□ -1.78
HRD1YOL013C MDM12Q92328 271 aa3.96□□□□□ -1.78
HRD1YOL013C CDC48P25694 835 aaKnown RBP3.95□□□□□ -1.78
HRD1YOL013C TRM2P33753 639 aa3.95□□□□□ -1.78
HRD1YOL013C TSL1P38427 1098 aaKnown RBP3.95□□□□□ -1.78
HRD1YOL013C SIT1P39980 628 aa3.95□□□□□ -1.78
HRD1YOL013C SNU66Q12420 587 aaPredicted RBP3.95□□□□□ -1.78
HRD1YOL013C DCG1P32460 244 aa3.94□□□□□ -1.78
HRD1YOL013C YRO2P38079 344 aa3.94□□□□□ -1.78
HRD1YOL013C MAL31P38156 614 aa3.94□□□□□ -1.78
HRD1YOL013C MGS1P40151 587 aa3.94□□□□□ -1.78
HRD1YOL013C IES1P43579 692 aa3.94□□□□□ -1.78
HRD1YOL013C TRE2Q08693 809 aa3.94□□□□□ -1.78
HRD1YOL013C NTO1Q12311 748 aa3.94□□□□□ -1.78
HRD1YOL013C PMA1P05030 918 aaKnown RBP3.94□□□□□ -1.78
HRD1YOL013C TOM70P07213 617 aaKnown RBP3.94□□□□□ -1.78
HRD1YOL013C DAL3P32459 195 aa3.94□□□□□ -1.78
HRD1YOL013C MRS6P32864 603 aaKnown RBP3.94□□□□□ -1.78
HRD1YOL013C KTR4P38131 464 aa3.94□□□□□ -1.78
HRD1YOL013C URM1P40554 99 aaPredicted RBP3.94□□□□□ -1.78
HRD1YOL013C MET13P53128 600 aa3.94□□□□□ -1.78
HRD1YOL013C RRI2Q12348 645 aa3.94□□□□□ -1.78
HRD1YOL013C YOL087CQ99247 1116 aa3.94□□□□□ -1.78
HRD1YOL013C CDC9P04819 755 aa3.93□□□□□ -1.78
HRD1YOL013C RRP8P38961 392 aaKnown RBP3.93□□□□□ -1.78
HRD1YOL013C CCM1P48237 864 aaPredicted RBP3.93□□□□□ -1.78
HRD1YOL013C UBA2P52488 636 aa3.93□□□□□ -1.78
HRD1YOL013C YKE2P52553 114 aa3.93□□□□□ -1.78
HRD1YOL013C RAI1P53063 387 aaKnown RBP3.93□□□□□ -1.78
HRD1YOL013C HFD1Q04458 532 aa3.93□□□□□ -1.78
HRD1YOL013C HIF1Q12373 385 aa3.93□□□□□ -1.78
HRD1YOL013C FOB1O13329 566 aa3.92□□□□□ -1.78
HRD1YOL013C RAD18P10862 487 aa3.92□□□□□ -1.78
HRD1YOL013C MSD1P15179 658 aaKnown RBP3.92□□□□□ -1.78
HRD1YOL013C NPP1P25353 742 aa3.92□□□□□ -1.78
HRD1YOL013C PTP2P29461 750 aa3.92□□□□□ -1.78
HRD1YOL013C PMI40P29952 429 aaKnown RBP3.92□□□□□ -1.78
HRD1YOL013C SSH4P32343 579 aa3.92□□□□□ -1.78
HRD1YOL013C YBR238CP38330 731 aaKnown RBP3.92□□□□□ -1.78
HRD1YOL013C RSC8P43609 557 aaKnown RBP3.92□□□□□ -1.78
HRD1YOL013C YJR096WP47137 282 aa3.92□□□□□ -1.78
HRD1YOL013C PHO23P50947 330 aa3.92□□□□□ -1.78
HRD1YOL013C VPS30Q02948 557 aa3.92□□□□□ -1.78
HRD1YOL013C YML131WQ03102 365 aa3.92□□□□□ -1.78
HRD1YOL013C LCD1Q04377 747 aa3.92□□□□□ -1.78
HRD1YOL013C PNS1Q12412 539 aa3.92□□□□□ -1.78
HRD1YOL013C KCS1Q12494 1050 aa3.92□□□□□ -1.78
HRD1YOL013C NOT3P06102 836 aaKnown RBP3.91□□□□□ -1.78
HRD1YOL013C RAD53P22216 821 aa3.91□□□□□ -1.78
HRD1YOL013C DBF20P32328 564 aa3.91□□□□□ -1.78
HRD1YOL013C AFR1P33304 620 aa3.91□□□□□ -1.78
HRD1YOL013C NIC96P34077 839 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 176.1 ms