RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeast

Gene NDL1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDL1	YLR254C	RIA1	P53893	1110 aa		5.18	□□□□□ -1.58
NDL1	YLR254C	IRC13	Q08630	104 aa		5.18	□□□□□ -1.58
NDL1	YLR254C	MET6	P05694	767 aa	Known RBP	5.17	□□□□□ -1.58
NDL1	YLR254C	MPH2	P0CD99	609 aa		5.17	□□□□□ -1.58
NDL1	YLR254C	HIS7	P33734	552 aa	Known RBP	5.17	□□□□□ -1.58
NDL1	YLR254C	CBR1	P38626	284 aa	Known RBP	5.17	□□□□□ -1.58
NDL1	YLR254C	SAK1	P38990	1142 aa		5.17	□□□□□ -1.58
NDL1	YLR254C	YJL049W	P47048	450 aa		5.17	□□□□□ -1.58
NDL1	YLR254C	MUS81	Q04149	632 aa	Predicted RBP	5.17	□□□□□ -1.58
NDL1	YLR254C	PFD1	P46988	109 aa		5.16	□□□□□ -1.58
NDL1	YLR254C	IMO32	P53219	342 aa		5.16	□□□□□ -1.58
NDL1	YLR254C	NRG1	Q03125	231 aa		5.16	□□□□□ -1.58
NDL1	YLR254C	SPO75	Q07798	868 aa		5.16	□□□□□ -1.58
NDL1	YLR254C	GGA2	P38817	585 aa	Known RBP	5.15	□□□□□ -1.59
NDL1	YLR254C	YIR042C	P40586	236 aa		5.15	□□□□□ -1.59
NDL1	YLR254C	SSY5	P47002	699 aa		5.15	□□□□□ -1.59
NDL1	YLR254C	FMP25	Q08023	583 aa		5.15	□□□□□ -1.59
NDL1	YLR254C	YOR022C	Q12204	715 aa		5.15	□□□□□ -1.59
NDL1	YLR254C	RAD4	P14736	754 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	FLO10	P36170	1169 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	NNF1	P47149	201 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	AFT2	Q08957	416 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	ENV7	Q12003	364 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	OSH2	Q12451	1283 aa		5.14	□□□□□ -1.59
NDL1	YLR254C	YIL166C	P40445	542 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	TIM54	P47045	478 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	ERP6	P53198	216 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	UTP8	P53276	713 aa	Known RBP	5.13	□□□□□ -1.59
NDL1	YLR254C	NOG2	P53742	486 aa	Known RBP	5.13	□□□□□ -1.59
NDL1	YLR254C	COQ11	Q05892	277 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	EAF1	Q06337	982 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	UBX5	Q06682	500 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	YNL162W-A	Q3E7A8	72 aa		5.13	□□□□□ -1.59
NDL1	YLR254C	YLR415C	O13578	112 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	PRC1	P00729	532 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	DAL7	P21826	554 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	RPL8B	P29453	256 aa	Known RBP	5.12	□□□□□ -1.59
NDL1	YLR254C	NIT3	P49954	291 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	HSV2	P50079	448 aa	Predicted RBP	5.12	□□□□□ -1.59
NDL1	YLR254C	SSL2	Q00578	843 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	HOF1	Q05080	669 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	SGO1	Q08490	590 aa		5.12	□□□□□ -1.59
NDL1	YLR254C	LAT1	P12695	482 aa	Known RBP	5.11	□□□□□ -1.59
NDL1	YLR254C	MSD1	P15179	658 aa	Known RBP	5.11	□□□□□ -1.59
NDL1	YLR254C	ARE1	P25628	610 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	PET10	P36139	283 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	PFA3	P42836	336 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	ARO10	Q06408	635 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	RSC3	Q06639	885 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	HBN1	Q96VH4	193 aa		5.11	□□□□□ -1.59
NDL1	YLR254C	HSP60	P19882	572 aa	Known RBP	5.1	□□□□□ -1.59
NDL1	YLR254C	YCL002C	P25565	263 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	ILV6	P25605	309 aa	Known RBP	5.1	□□□□□ -1.59
NDL1	YLR254C	SAP190	P36123	1033 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	DAM1	P53267	343 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	YGR125W	P53273	1036 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	ASM4	Q05166	528 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	THI7	Q05998	598 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	TGL5	Q12043	749 aa		5.1	□□□□□ -1.59
NDL1	YLR254C	BCD1	P38772	366 aa		5.09	□□□□□ -1.59
NDL1	YLR254C	HUL5	P53119	910 aa		5.09	□□□□□ -1.59
NDL1	YLR254C	LRS4	Q04087	347 aa	Known RBP	5.09	□□□□□ -1.59
NDL1	YLR254C	TOP3	P13099	656 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	DMC1	P25453	334 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	ADY2	P25613	283 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	FMP52	P40008	231 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	TEL2	P53038	688 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	TAD1	P53065	400 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	NSE3	Q05541	303 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	FLC1	Q08967	793 aa		5.08	□□□□□ -1.6
NDL1	YLR254C	CDC53	Q12018	815 aa	Known RBP	5.08	□□□□□ -1.6
NDL1	YLR254C	CIT1	P00890	479 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	YHR020W	P38708	688 aa	Known RBP	5.07	□□□□□ -1.6
NDL1	YLR254C	YJL206C	P39529	758 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	HOS4	P40480	1083 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	HUL4	P40985	892 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	YAP7	Q08182	245 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	YOL098C	Q12496	1037 aa		5.07	□□□□□ -1.6
NDL1	YLR254C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
NDL1	YLR254C	SPO11	P23179	398 aa		5.05	□□□□□ -1.6
NDL1	YLR254C	OCA5	P38738	679 aa		5.05	□□□□□ -1.6
NDL1	YLR254C	UBC11	P52492	156 aa		5.05	□□□□□ -1.6
NDL1	YLR254C	YDL124W	Q07551	312 aa	Known RBP	5.05	□□□□□ -1.6
NDL1	YLR254C	ICT1	Q12385	394 aa		5.05	□□□□□ -1.6
NDL1	YLR254C	SRP40	P32583	406 aa	Predicted RBP	5.04	□□□□□ -1.6
NDL1	YLR254C	MTR3	P48240	250 aa	Predicted RBP	5.04	□□□□□ -1.6
NDL1	YLR254C	SMX3	P54999	86 aa	Predicted RBP	5.04	□□□□□ -1.6
NDL1	YLR254C	APM1	Q00776	475 aa	Predicted RBP	5.04	□□□□□ -1.6
NDL1	YLR254C	TAF8	Q03750	510 aa		5.04	□□□□□ -1.6
NDL1	YLR254C	GAL11	P19659	1081 aa		5.03	□□□□□ -1.6
NDL1	YLR254C	HIR1	P32479	840 aa		5.03	□□□□□ -1.6
NDL1	YLR254C	REV7	P38927	245 aa		5.03	□□□□□ -1.6
NDL1	YLR254C	RSP5	P39940	809 aa	Known RBP	5.03	□□□□□ -1.6
NDL1	YLR254C	UBP6	P43593	499 aa	Known RBP	5.03	□□□□□ -1.6
NDL1	YLR254C	YOR131C	Q12486	218 aa		5.03	□□□□□ -1.6
NDL1	YLR254C	CAN1	P04817	590 aa		5.02	□□□□□ -1.61
NDL1	YLR254C	EMC3	P36039	253 aa		5.02	□□□□□ -1.61
NDL1	YLR254C	EMP70	P32802	667 aa		5.01	□□□□□ -1.61
NDL1	YLR254C	YKL091C	P33324	310 aa	Known RBP	5.01	□□□□□ -1.61
NDL1	YLR254C	YBR259W	P38338	688 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms