RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	PRE9	P23638	258 aa	Known RBP	4.39	□□□□□ -1.71
PAM18	YLR008C	KCC4	P25389	1037 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	ARE1	P25628	610 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	SQT1	P35184	431 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	BAP2	P38084	609 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	GEM1	P39722	662 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	ERR3	P42222	437 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	SAP155	P43612	1002 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	CNN1	P43618	361 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	IML2	P47031	731 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	NPY1	P53164	384 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	GTR1	Q00582	310 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	SWA2	Q06677	668 aa		4.39	□□□□□ -1.71
PAM18	YLR008C	YLR419W	Q06698	1435 aa	Known RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	ERS1	P17261	260 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	FUR1	P18562	216 aa	Known RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	SAN1	P22470	610 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	POL4	P25615	582 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	BEM3	P32873	1128 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	DHR2	P36009	735 aa	Predicted RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	YKL133C	P36066	463 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	YKL077W	P36081	392 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	PIM1	P36775	1133 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	UBS1	P38290	277 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	LRP1	P38801	184 aa	Known RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	SKN7	P38889	622 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	YIL166C	P40445	542 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	HIS6	P40545	261 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	RET2	P43621	546 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	PFD1	P46988	109 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	KEL2	P50090	882 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	ERP6	P53198	216 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	PBP1	P53297	722 aa	Known RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	PEX13	P80667	386 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	SNP1	Q00916	300 aa	Predicted RBP	4.38	□□□□□ -1.71
PAM18	YLR008C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
PAM18	YLR008C	ULP1	Q02724	621 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	RAD33	Q04231	177 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	EAF1	Q06337	982 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	OPY2	Q06810	360 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	AVO1	Q08236	1176 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	MCA1	Q08601	432 aa		4.38	□□□□□ -1.71
PAM18	YLR008C	AI3	P03877	415 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
PAM18	YLR008C	RED1	P14291	827 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SUI2	P20459	304 aa	Known RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	PRP5	P21372	849 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	RSC6	P25632	483 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	RAD16	P31244	790 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SWC3	P31376	625 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	MKK2	P32491	506 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SFA1	P32771	386 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SRP72	P38688	640 aa	Known RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	SHU2	P38957	223 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	GDH3	P39708	457 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	ACA1	P39970	489 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	JEM1	P40358	645 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	SEC26	P41810	973 aa	Known RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	YJL055W	P47044	245 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	CCT8	P47079	568 aa	Known RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	YML6	P51998	286 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	UTP22	P53254	1237 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	RIA1	P53893	1110 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	NCS2	P53923	493 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	ZDS2	P54786	942 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	EEB1	Q02891	456 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	TRS130	Q03660	1102 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	MTQ2	Q03920	221 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	YMR018W	Q04364	514 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	HFD1	Q04458	532 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	YIG1	Q08956	461 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	MCD1	Q12158	566 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	RRG1	Q12167	365 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	SCM3	Q12334	223 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	TY1A-NL1	Q12391	440 aa	Known RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	SPO21	Q12411	609 aa		4.37	□□□□□ -1.71
PAM18	YLR008C	HSH49	Q99181	213 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM18	YLR008C	GDB1	Q06625	1536 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	BUD3	P25558	1636 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	STF1	P01098	86 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
PAM18	YLR008C	ORC2	P32833	620 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	NIP100	P33420	868 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	MEF2	P39677	819 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	YAP1802	P53309	568 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	ALF1	P53904	254 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	YKU80	Q04437	629 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	EIS1	Q05050	843 aa	Known RBP	4.36	□□□□□ -1.71
PAM18	YLR008C	YLR287C	Q05881	355 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	ARV1	Q06541	321 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	CLP1	Q08685	445 aa	Predicted RBP	4.36	□□□□□ -1.71
PAM18	YLR008C	YLL054C	Q12244	843 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	RRP36	Q12481	300 aa	Predicted RBP	4.36	□□□□□ -1.71
PAM18	YLR008C	SMC6	Q12749	1114 aa		4.36	□□□□□ -1.71
PAM18	YLR008C	GCR1	P07261	785 aa		4.35	□□□□□ -1.71
PAM18	YLR008C	RPC40	P07703	335 aa	Known RBP	4.35	□□□□□ -1.71
PAM18	YLR008C	SBP1	P10080	294 aa	Known RBP	4.35	□□□□□ -1.71
PAM18	YLR008C	MRP7	P12687	371 aa		4.35	□□□□□ -1.71
PAM18	YLR008C	HNM1	P19807	563 aa		4.35	□□□□□ -1.71
PAM18	YLR008C	MSH3	P25336	1018 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms