RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W OLA1P38219 394 aaKnown RBP6.9□□□□□ -1.3
SQT1YIR012W SPP381P38282 291 aaPredicted RBP6.9□□□□□ -1.3
SQT1YIR012W YNL320WP42840 284 aa6.9□□□□□ -1.3
SQT1YIR012W CTR1P49573 406 aa6.9□□□□□ -1.3
SQT1YIR012W ENV11P53246 860 aa6.9□□□□□ -1.3
SQT1YIR012W FPK1P53739 893 aa6.9□□□□□ -1.3
SQT1YIR012W PTA1Q01329 785 aaPredicted RBP6.9□□□□□ -1.3
SQT1YIR012W YML082WQ04533 649 aaKnown RBP6.9□□□□□ -1.3
SQT1YIR012W SPH1Q06160 661 aa6.9□□□□□ -1.3
SQT1YIR012W RIO1Q12196 484 aaKnown RBP6.9□□□□□ -1.3
SQT1YIR012W RKM4Q12504 494 aa6.9□□□□□ -1.3
SQT1YIR012W CSR2Q12734 1121 aa6.9□□□□□ -1.3
SQT1YIR012W YOL087CQ99247 1116 aa6.9□□□□□ -1.3
SQT1YIR012W GAL2P13181 574 aa6.89□□□□□ -1.31
SQT1YIR012W KIP1P28742 1111 aa6.89□□□□□ -1.31
SQT1YIR012W NAM7P30771 971 aaKnown RBP6.89□□□□□ -1.31
SQT1YIR012W SEC8P32855 1065 aa6.89□□□□□ -1.31
SQT1YIR012W TRZ1P36159 838 aaPredicted RBP6.89□□□□□ -1.31
SQT1YIR012W YGL039WP53183 348 aaKnown RBP6.89□□□□□ -1.31
SQT1YIR012W EEB1Q02891 456 aa6.89□□□□□ -1.31
SQT1YIR012W DON1Q05610 365 aa6.89□□□□□ -1.31
SQT1YIR012W CRD1Q07560 283 aa6.89□□□□□ -1.31
SQT1YIR012W SPO21Q12411 609 aa6.89□□□□□ -1.31
SQT1YIR012W SNF1P06782 633 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W PRP9P19736 530 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W DBP5P20449 482 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W SEC21P32074 935 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W UBC6P33296 250 aaPredicted RBP6.88□□□□□ -1.31
SQT1YIR012W SLD2P34252 453 aa6.88□□□□□ -1.31
SQT1YIR012W ERC1P38767 581 aa6.88□□□□□ -1.31
SQT1YIR012W PTC2P39966 464 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W YJR039WP47107 1121 aa6.88□□□□□ -1.31
SQT1YIR012W BRO1P48582 844 aa6.88□□□□□ -1.31
SQT1YIR012W RIM8P53179 542 aa6.88□□□□□ -1.31
SQT1YIR012W ZPR1P53303 486 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W SQS1P53866 767 aaKnown RBP6.88□□□□□ -1.31
SQT1YIR012W UBX5Q06682 500 aa6.88□□□□□ -1.31
SQT1YIR012W YDL206WQ12424 762 aa6.88□□□□□ -1.31
SQT1YIR012W YLR278CQ05854 1341 aa6.87□□□□□ -1.31
SQT1YIR012W YLR462WO13556 202 aa6.87□□□□□ -1.31
SQT1YIR012W ARG4P04076 463 aaPredicted RBP6.87□□□□□ -1.31
SQT1YIR012W FBP1P09201 348 aa6.87□□□□□ -1.31
SQT1YIR012W MUD1P32605 298 aaKnown RBP6.87□□□□□ -1.31
SQT1YIR012W SHP1P34223 423 aa6.87□□□□□ -1.31
SQT1YIR012W MCR1P36060 302 aaKnown RBP6.87□□□□□ -1.31
SQT1YIR012W EXO5P38289 585 aa6.87□□□□□ -1.31
SQT1YIR012W HIS2P38635 335 aa6.87□□□□□ -1.31
SQT1YIR012W YHL049CP38722 271 aa6.87□□□□□ -1.31
SQT1YIR012W YEL075CP39972 122 aa6.87□□□□□ -1.31
SQT1YIR012W LCP5P40079 357 aaPredicted RBP6.87□□□□□ -1.31
SQT1YIR012W YER189WP40104 122 aa6.87□□□□□ -1.31
SQT1YIR012W PSY2P40164 858 aa6.87□□□□□ -1.31
SQT1YIR012W PXA1P41909 870 aa6.87□□□□□ -1.31
SQT1YIR012W YFL064CP43540 174 aa6.87□□□□□ -1.31
SQT1YIR012W TAM41P53230 385 aa6.87□□□□□ -1.31
SQT1YIR012W JJJ1P53863 590 aa6.87□□□□□ -1.31
SQT1YIR012W TDA9Q04545 1251 aa6.87□□□□□ -1.31
SQT1YIR012W DUS3Q06053 668 aaKnown RBP6.87□□□□□ -1.31
SQT1YIR012W CDC53Q12018 815 aaKnown RBP6.87□□□□□ -1.31
SQT1YIR012W AIM41Q12032 185 aa6.87□□□□□ -1.31
SQT1YIR012W AIM7Q12156 149 aa6.87□□□□□ -1.31
SQT1YIR012W YBL111CQ3E7Y5 667 aa6.87□□□□□ -1.31
SQT1YIR012W TY1B-AO13527 1196 aaKnown RBP6.86□□□□□ -1.31
SQT1YIR012W CDC33P07260 213 aaKnown RBP6.86□□□□□ -1.31
SQT1YIR012W PER1P25625 357 aa6.86□□□□□ -1.31
SQT1YIR012W CDC11P32458 415 aa6.86□□□□□ -1.31
SQT1YIR012W MMS21P38632 267 aa6.86□□□□□ -1.31
SQT1YIR012W TRS85P46944 698 aa6.86□□□□□ -1.31
SQT1YIR012W NMD5P46970 1048 aa6.86□□□□□ -1.31
SQT1YIR012W YJL007CP47080 104 aa6.86□□□□□ -1.31
SQT1YIR012W HUL5P53119 910 aa6.86□□□□□ -1.31
SQT1YIR012W YMR187CQ03236 431 aa6.86□□□□□ -1.31
SQT1YIR012W ISA1Q07821 250 aaPredicted RBP6.86□□□□□ -1.31
SQT1YIR012W SLX4Q12098 748 aa6.86□□□□□ -1.31
SQT1YIR012W SPT2P06843 333 aaPredicted RBP6.85□□□□□ -1.31
SQT1YIR012W PYC1P11154 1178 aaKnown RBP6.85□□□□□ -1.31
SQT1YIR012W ATG19P35193 415 aa6.85□□□□□ -1.31
SQT1YIR012W OCT1P35999 772 aa6.85□□□□□ -1.31
SQT1YIR012W RRT2P38332 387 aa6.85□□□□□ -1.31
SQT1YIR012W SAK1P38990 1142 aa6.85□□□□□ -1.31
SQT1YIR012W CCT2P39076 527 aaKnown RBP6.85□□□□□ -1.31
SQT1YIR012W ECM1P39715 212 aa6.85□□□□□ -1.31
SQT1YIR012W SPC72P39723 622 aa6.85□□□□□ -1.31
SQT1YIR012W CLA4P48562 842 aa6.85□□□□□ -1.31
SQT1YIR012W ROD1Q02805 837 aa6.85□□□□□ -1.31
SQT1YIR012W YDR278CQ05612 105 aa6.85□□□□□ -1.31
SQT1YIR012W YPR109WQ06104 294 aa6.85□□□□□ -1.31
SQT1YIR012W YRR1Q12172 810 aa6.85□□□□□ -1.31
SQT1YIR012W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
SQT1YIR012W YDJ1P25491 409 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W CDC48P25694 835 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W CAP1P28495 268 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W RTG2P32608 588 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W UTR4P32626 227 aa6.84□□□□□ -1.31
SQT1YIR012W COT1P32798 439 aa6.84□□□□□ -1.31
SQT1YIR012W VPS35P34110 944 aa6.84□□□□□ -1.31
SQT1YIR012W YKR018CP36114 725 aa6.84□□□□□ -1.31
SQT1YIR012W NCL1P38205 684 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W TIF5P38431 405 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W KAP123P40069 1113 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms