RNA–Protein interactions for RNA: YGR169C

PUS6, Transcript of tRNA:pseudouridine synthase, yeast

Gene PUS6, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS6	YGR169C	YGL140C	P53120	1219 aa		5.65	□□□□□ -1.5
PUS6	YGR169C	FAR11	P53917	953 aa		5.65	□□□□□ -1.5
PUS6	YGR169C	YDR341C	Q05506	607 aa	Known RBP	5.65	□□□□□ -1.5
PUS6	YGR169C	JIP5	Q06214	492 aa	Predicted RBP	5.65	□□□□□ -1.5
PUS6	YGR169C	PSK2	Q08217	1101 aa		5.65	□□□□□ -1.5
PUS6	YGR169C	YOR111W	Q99210	232 aa		5.65	□□□□□ -1.5
PUS6	YGR169C	TY1B-A	O13527	1196 aa	Known RBP	5.64	□□□□□ -1.51
PUS6	YGR169C	HEM13	P11353	328 aa	Known RBP	5.64	□□□□□ -1.51
PUS6	YGR169C	SRP54	P20424	541 aa	Known RBP	5.64	□□□□□ -1.51
PUS6	YGR169C	OMA1	P36163	345 aa		5.64	□□□□□ -1.51
PUS6	YGR169C	NEM1	P38757	446 aa		5.64	□□□□□ -1.51
PUS6	YGR169C	MXR1	P40029	184 aa		5.64	□□□□□ -1.51
PUS6	YGR169C	GCV1	P48015	400 aa		5.64	□□□□□ -1.51
PUS6	YGR169C	VIP1	Q06685	1146 aa	Known RBP	5.64	□□□□□ -1.51
PUS6	YGR169C	CIT1	P00890	479 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	UTR4	P32626	227 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	TGL1	P34163	548 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	PHO88	P38264	188 aa	Predicted RBP	5.63	□□□□□ -1.51
PUS6	YGR169C	YHL017W	P38745	532 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	CCT3	P39077	534 aa	Known RBP	5.63	□□□□□ -1.51
PUS6	YGR169C	FMS1	P50264	508 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	YGR125W	P53273	1036 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	GDE1	Q02979	1223 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	SPH1	Q06160	661 aa		5.63	□□□□□ -1.51
PUS6	YGR169C	MET6	P05694	767 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	GCR1	P07261	785 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	RPL19A	P0CX82	189 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	RPL19B	P0CX83	189 aa	Predicted RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	SAM1	P10659	382 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	HCA4	P20448	770 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	CBP3	P21560	335 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	SWI4	P25302	1093 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	SRP40	P32583	406 aa	Predicted RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	SFA1	P32771	386 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	PET112	P33893	541 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	RXT2	P38255	430 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	PSF2	P40359	213 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	PCI8	P40512	444 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	BUD6	P41697	788 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	EPL1	P43572	832 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	LIF1	P53150	421 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	NCE103	P53615	221 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	TMA64	Q04600	565 aa	Known RBP	5.62	□□□□□ -1.51
PUS6	YGR169C	YLR407W	Q06070	228 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	MRL1	Q06815	381 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	GUD1	Q07729	489 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	REC8	Q12188	680 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	YLL054C	Q12244	843 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	CEX1	Q12453	761 aa		5.62	□□□□□ -1.51
PUS6	YGR169C	SEC23	P15303	768 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
PUS6	YGR169C	RSC6	P25632	483 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	MCM4	P30665	933 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	MCR1	P36060	302 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	RPN10	P38886	268 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	SPO74	P45819	413 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	CTF18	P49956	741 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	ASE1	P50275	885 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	YNR063W	P53749	607 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	BUL2	Q03758	920 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	UTP5	Q04177	643 aa	Known RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	CSM3	Q04659	317 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	SUE1	Q06524	206 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	ISA1	Q07821	250 aa	Predicted RBP	5.61	□□□□□ -1.51
PUS6	YGR169C	MET7	Q08645	548 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	YOR223W	Q12015	292 aa		5.61	□□□□□ -1.51
PUS6	YGR169C	DED1	P06634	604 aa	Known RBP	5.6	□□□□□ -1.51
PUS6	YGR169C	SES1	P07284	462 aa	Known RBP	5.6	□□□□□ -1.51
PUS6	YGR169C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
PUS6	YGR169C	VMA4	P22203	233 aa	Known RBP	5.6	□□□□□ -1.51
PUS6	YGR169C	RGT1	P32862	1170 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	RDH54	P38086	958 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	INP52	P50942	1183 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	ARI1	P53111	347 aa	Known RBP	5.6	□□□□□ -1.51
PUS6	YGR169C	YGL138C	P53122	345 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	SLD5	Q03406	294 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	DOT1	Q04089	582 aa	Known RBP	5.6	□□□□□ -1.51
PUS6	YGR169C	SVF1	Q05515	481 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	DUS4	Q06063	367 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	HDA2	Q06629	674 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	AVO1	Q08236	1176 aa		5.6	□□□□□ -1.51
PUS6	YGR169C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
PUS6	YGR169C	SRO9	P25567	434 aa	Known RBP	5.59	□□□□□ -1.51
PUS6	YGR169C	PAH1	P32567	862 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	SAS3	P34218	831 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	GPT2	P36148	743 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	ATG14	P38270	344 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	MAD1	P40957	749 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	VPS53	P47061	822 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	ENT3	P47160	408 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	YGR045C	P53229	120 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	ELA1	P53861	379 aa	Predicted RBP	5.59	□□□□□ -1.51
PUS6	YGR169C	BNI5	P53890	448 aa	Known RBP	5.59	□□□□□ -1.51
PUS6	YGR169C	SMD2	Q06217	110 aa	Known RBP	5.59	□□□□□ -1.51
PUS6	YGR169C	ICL2	Q12031	575 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	ERP3	Q12403	225 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	RKM4	Q12504	494 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	NBL1	Q3E7Y6	73 aa		5.59	□□□□□ -1.51
PUS6	YGR169C	HSP82	P02829	709 aa	Known RBP	5.58	□□□□□ -1.52
PUS6	YGR169C	CDC6	P09119	513 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms