RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W HST3P53687 447 aa7.49□□□□□ -1.21
SNU71YGR013W HFI1Q12060 488 aa7.49□□□□□ -1.21
SNU71YGR013W TSC11P40061 1430 aa7.49□□□□□ -1.21
SNU71YGR013W PRO1P32264 428 aa7.49□□□□□ -1.21
SNU71YGR013W SLA2P33338 968 aa7.49□□□□□ -1.21
SNU71YGR013W PGM2P37012 569 aaKnown RBP7.49□□□□□ -1.21
SNU71YGR013W QNS1P38795 714 aaKnown RBP7.49□□□□□ -1.21
SNU71YGR013W PRK1P40494 810 aa7.49□□□□□ -1.21
SNU71YGR013W LSC2P53312 427 aa7.49□□□□□ -1.21
SNU71YGR013W YHM2Q04013 314 aa7.49□□□□□ -1.21
SNU71YGR013W YMR018WQ04364 514 aa7.49□□□□□ -1.21
SNU71YGR013W ALG6Q12001 544 aaKnown RBP7.49□□□□□ -1.21
SNU71YGR013W TCB1Q12466 1186 aa7.49□□□□□ -1.21
SNU71YGR013W CDC19P00549 500 aaKnown RBP7.48□□□□□ -1.21
SNU71YGR013W BI4P03879 638 aa7.48□□□□□ -1.21
SNU71YGR013W RPN10P38886 268 aaKnown RBP7.48□□□□□ -1.21
SNU71YGR013W VPS8P39702 1274 aa7.48□□□□□ -1.21
SNU71YGR013W BMT6Q12291 365 aa7.48□□□□□ -1.21
SNU71YGR013W PET309P32522 965 aaPredicted RBP7.47□□□□□ -1.21
SNU71YGR013W SWI3P32591 825 aa7.47□□□□□ -1.21
SNU71YGR013W OAF3P36023 863 aa7.47□□□□□ -1.21
SNU71YGR013W PSY4P38193 441 aa7.47□□□□□ -1.21
SNU71YGR013W GPB2P39717 880 aa7.47□□□□□ -1.21
SNU71YGR013W SDH5Q08230 162 aa7.47□□□□□ -1.21
SNU71YGR013W APM4Q99186 491 aa7.47□□□□□ -1.21
SNU71YGR013W GEA2P39993 1459 aaKnown RBP7.47□□□□□ -1.21
SNU71YGR013W TRK1P12685 1235 aa7.47□□□□□ -1.21
SNU71YGR013W GFA1P14742 717 aaKnown RBP7.47□□□□□ -1.21
SNU71YGR013W HCA4P20448 770 aaKnown RBP7.47□□□□□ -1.21
SNU71YGR013W RRN3P36070 627 aa7.47□□□□□ -1.21
SNU71YGR013W NUP85P46673 744 aa7.47□□□□□ -1.21
SNU71YGR013W PTA1Q01329 785 aaPredicted RBP7.47□□□□□ -1.21
SNU71YGR013W BLS1Q06071 122 aa7.47□□□□□ -1.21
SNU71YGR013W GRC3Q07845 632 aa7.47□□□□□ -1.21
SNU71YGR013W ACM1Q08981 209 aa7.47□□□□□ -1.21
SNU71YGR013W NUP159P40477 1460 aa7.47□□□□□ -1.21
SNU71YGR013W RKM3P38222 552 aa7.46□□□□□ -1.22
SNU71YGR013W FAT1P38225 669 aa7.46□□□□□ -1.22
SNU71YGR013W HSL7P38274 827 aa7.46□□□□□ -1.22
SNU71YGR013W AIR1P40507 360 aaKnown RBP7.46□□□□□ -1.22
SNU71YGR013W VTC2P43585 828 aa7.46□□□□□ -1.22
SNU71YGR013W ALY2P47029 1046 aa7.46□□□□□ -1.22
SNU71YGR013W YGR045CP53229 120 aa7.46□□□□□ -1.22
SNU71YGR013W ENV11P53246 860 aa7.46□□□□□ -1.22
SNU71YGR013W RSA3Q05942 220 aaKnown RBP7.46□□□□□ -1.22
SNU71YGR013W YRF1-1P0CX20 1796 aa7.46□□□□□ -1.22
SNU71YGR013W YRF1-5P0CX21 1796 aa7.46□□□□□ -1.22
SNU71YGR013W YRF1-8P0CX22 1796 aa7.46□□□□□ -1.22
SNU71YGR013W TY1B-JR2P47100 1755 aaKnown RBP7.46□□□□□ -1.22
SNU71YGR013W TY1B-ER2Q03619 1755 aa7.46□□□□□ -1.22
SNU71YGR013W TY1B-MR1Q04214 1755 aa7.46□□□□□ -1.22
SNU71YGR013W TY1B-MR2Q04670 1755 aaKnown RBP7.46□□□□□ -1.22
SNU71YGR013W TY1B-LR1Q12088 1755 aaKnown RBP7.46□□□□□ -1.22
SNU71YGR013W TY1B-NL1Q12112 1755 aa7.46□□□□□ -1.22
SNU71YGR013W TY1B-GR1Q12141 1755 aa7.46□□□□□ -1.22
SNU71YGR013W TY1B-BLQ12490 1755 aa7.46□□□□□ -1.22
SNU71YGR013W SSM4P40318 1319 aa7.45□□□□□ -1.22
SNU71YGR013W ATP12P22135 325 aa7.45□□□□□ -1.22
SNU71YGR013W AMS1P22855 1083 aa7.45□□□□□ -1.22
SNU71YGR013W RER1P25560 188 aa7.45□□□□□ -1.22
SNU71YGR013W NPP2P39997 493 aa7.45□□□□□ -1.22
SNU71YGR013W GYP7P48365 746 aa7.45□□□□□ -1.22
SNU71YGR013W TEP1P53916 434 aa7.45□□□□□ -1.22
SNU71YGR013W SPC19Q03954 165 aa7.45□□□□□ -1.22
SNU71YGR013W EIS1Q05050 843 aaKnown RBP7.45□□□□□ -1.22
SNU71YGR013W HOM3P10869 527 aa7.45□□□□□ -1.22
SNU71YGR013W HOP1P20050 605 aa7.45□□□□□ -1.22
SNU71YGR013W MSH1P25846 959 aa7.45□□□□□ -1.22
SNU71YGR013W LEM3P42838 414 aa7.45□□□□□ -1.22
SNU71YGR013W AVO1Q08236 1176 aa7.45□□□□□ -1.22
SNU71YGR013W VTH1P40438 1549 aa7.44□□□□□ -1.22
SNU71YGR013W VTH2P40890 1549 aa7.44□□□□□ -1.22
SNU71YGR013W YKR078WP36158 585 aaKnown RBP7.44□□□□□ -1.22
SNU71YGR013W YFL054CP43549 646 aa7.44□□□□□ -1.22
SNU71YGR013W ASK10P48361 1146 aa7.44□□□□□ -1.22
SNU71YGR013W RSC1P53236 928 aa7.44□□□□□ -1.22
SNU71YGR013W SOK2P53438 785 aaPredicted RBP7.44□□□□□ -1.22
SNU71YGR013W HLR1Q04429 423 aa7.44□□□□□ -1.22
SNU71YGR013W TY4B-PA0A0B7P3V8 1104 aa7.43□□□□□ -1.22
SNU71YGR013W SAN1P22470 610 aa7.43□□□□□ -1.22
SNU71YGR013W SHM2P37291 469 aaKnown RBP7.43□□□□□ -1.22
SNU71YGR013W FAF1P40546 346 aaPredicted RBP7.43□□□□□ -1.22
SNU71YGR013W YKE2P52553 114 aa7.43□□□□□ -1.22
SNU71YGR013W TY4A-HQ6Q5P6 413 aa7.43□□□□□ -1.22
SNU71YGR013W DAL7P21826 554 aa7.43□□□□□ -1.22
SNU71YGR013W YCL002CP25565 263 aa7.43□□□□□ -1.22
SNU71YGR013W UGA2P38067 497 aa7.43□□□□□ -1.22
SNU71YGR013W BNA2P47125 453 aa7.43□□□□□ -1.22
SNU71YGR013W MEH1Q02205 184 aa7.43□□□□□ -1.22
SNU71YGR013W LRS4Q04087 347 aaKnown RBP7.43□□□□□ -1.22
SNU71YGR013W SXM1Q04175 944 aaKnown RBP7.43□□□□□ -1.22
SNU71YGR013W OMS1Q06668 471 aa7.43□□□□□ -1.22
SNU71YGR013W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
SNU71YGR013W YER158CP40095 573 aa7.42□□□□□ -1.22
SNU71YGR013W RNR4P49723 345 aaKnown RBP7.42□□□□□ -1.22
SNU71YGR013W ELA1P53861 379 aaPredicted RBP7.42□□□□□ -1.22
SNU71YGR013W IMH1Q06704 911 aaKnown RBP7.42□□□□□ -1.22
SNU71YGR013W MDM38Q08179 573 aa7.42□□□□□ -1.22
SNU71YGR013W NUR1Q12066 484 aa7.42□□□□□ -1.22
SNU71YGR013W MYO4P32492 1471 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms