RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W CEM1P39525 442 aa2.61□□□□□ -1.99
UBP1YDL122W YIR016WP40572 265 aa2.61□□□□□ -1.99
UBP1YDL122W MDR1P53258 950 aa2.61□□□□□ -1.99
UBP1YDL122W RNH70P53331 553 aa2.61□□□□□ -1.99
UBP1YDL122W TMA64Q04600 565 aaKnown RBP2.61□□□□□ -1.99
UBP1YDL122W RRI2Q12348 645 aa2.61□□□□□ -1.99
UBP1YDL122W YIR042CP40586 236 aa2.6□□□□□ -1.99
UBP1YDL122W SUR7P54003 302 aa2.6□□□□□ -1.99
UBP1YDL122W YHM2Q04013 314 aa2.6□□□□□ -1.99
UBP1YDL122W HDA3Q06623 655 aa2.6□□□□□ -1.99
UBP1YDL122W YOR097CQ12274 175 aaPredicted RBP2.6□□□□□ -1.99
UBP1YDL122W TSC13Q99190 310 aa2.6□□□□□ -1.99
UBP1YDL122W FRT1Q99332 602 aa2.6□□□□□ -1.99
UBP1YDL122W VAN1P23642 535 aa2.6□□□□□ -1.99
UBP1YDL122W MET4P32389 672 aa2.6□□□□□ -1.99
UBP1YDL122W PPG1P32838 368 aa2.6□□□□□ -1.99
UBP1YDL122W GGA2P38817 585 aaKnown RBP2.6□□□□□ -1.99
UBP1YDL122W DUG1P43616 481 aaKnown RBP2.6□□□□□ -1.99
UBP1YDL122W YMR265CQ03508 461 aaKnown RBP2.6□□□□□ -1.99
UBP1YDL122W SYT1Q06836 1226 aa2.6□□□□□ -1.99
UBP1YDL122W TY1A-DR3Q12441 440 aa2.6□□□□□ -1.99
UBP1YDL122W TRS33Q99394 268 aa2.6□□□□□ -1.99
UBP1YDL122W ACC1Q00955 2233 aaKnown RBP2.59□□□□□ -1.99
UBP1YDL122W AI1P03875 834 aa2.59□□□□□ -1.99
UBP1YDL122W SPE1P08432 466 aa2.59□□□□□ -1.99
UBP1YDL122W PEX1P24004 1043 aa2.59□□□□□ -1.99
UBP1YDL122W KIN82P25341 720 aa2.59□□□□□ -1.99
UBP1YDL122W RRP14P36080 434 aaKnown RBP2.59□□□□□ -1.99
UBP1YDL122W GIP1P38229 639 aa2.59□□□□□ -1.99
UBP1YDL122W UBS1P38290 277 aa2.59□□□□□ -1.99
UBP1YDL122W YHL026CP38740 315 aa2.59□□□□□ -1.99
UBP1YDL122W VAC8P39968 578 aa2.59□□□□□ -1.99
UBP1YDL122W PSP2P50109 593 aaKnown RBP2.59□□□□□ -1.99
UBP1YDL122W HUL5P53119 910 aa2.59□□□□□ -1.99
UBP1YDL122W PCD1Q12524 340 aa2.59□□□□□ -1.99
UBP1YDL122W ADE2P21264 571 aaKnown RBP2.59□□□□□ -2
UBP1YDL122W UBC1P21734 215 aaKnown RBP2.59□□□□□ -2
UBP1YDL122W PGS1P25578 521 aa2.59□□□□□ -2
UBP1YDL122W PEX34P25584 144 aa2.59□□□□□ -2
UBP1YDL122W SHP1P34223 423 aa2.59□□□□□ -2
UBP1YDL122W MAD1P40957 749 aa2.59□□□□□ -2
UBP1YDL122W OSW7P43611 510 aa2.59□□□□□ -2
UBP1YDL122W GYP7P48365 746 aa2.59□□□□□ -2
UBP1YDL122W YNL134CP53912 376 aaKnown RBP2.59□□□□□ -2
UBP1YDL122W HOS3Q02959 697 aaKnown RBP2.59□□□□□ -2
UBP1YDL122W FLC1Q08967 793 aa2.59□□□□□ -2
UBP1YDL122W BEM2P39960 2167 aaKnown RBP2.59□□□□□ -2
UBP1YDL122W HSF1P10961 833 aa2.58□□□□□ -2
UBP1YDL122W KGD2P19262 463 aaPredicted RBP2.58□□□□□ -2
UBP1YDL122W YKL091CP33324 310 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W FPR3P38911 411 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W FYV10P40492 516 aa2.58□□□□□ -2
UBP1YDL122W ALA1P40825 983 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W YFL066CP43538 392 aa2.58□□□□□ -2
UBP1YDL122W YFL034WP43564 1073 aa2.58□□□□□ -2
UBP1YDL122W RPS7BP48164 190 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W NUP84P52891 726 aa2.58□□□□□ -2
UBP1YDL122W RTS3P53289 263 aa2.58□□□□□ -2
UBP1YDL122W ADE12P80210 433 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W YPQ2Q06328 317 aa2.58□□□□□ -2
UBP1YDL122W HFI1Q12060 488 aa2.58□□□□□ -2
UBP1YDL122W RTK1Q12100 620 aaPredicted RBP2.58□□□□□ -2
UBP1YDL122W APC11Q12157 165 aa2.58□□□□□ -2
UBP1YDL122W SUL2Q12325 893 aa2.58□□□□□ -2
UBP1YDL122W PNS1Q12412 539 aa2.58□□□□□ -2
UBP1YDL122W GPI10P30777 616 aa2.58□□□□□ -2
UBP1YDL122W CCL1P37366 393 aa2.58□□□□□ -2
UBP1YDL122W HMT1P38074 348 aa2.58□□□□□ -2
UBP1YDL122W RXT2P38255 430 aa2.58□□□□□ -2
UBP1YDL122W PSP1P50896 841 aaKnown RBP2.58□□□□□ -2
UBP1YDL122W PTA1Q01329 785 aaPredicted RBP2.58□□□□□ -2
UBP1YDL122W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
UBP1YDL122W YPL066WQ12194 479 aa2.58□□□□□ -2
UBP1YDL122W LSO1Q3E827 93 aa2.58□□□□□ -2
UBP1YDL122W MCM1P11746 286 aa2.57□□□□□ -2
UBP1YDL122W CLN2P20438 545 aa2.57□□□□□ -2
UBP1YDL122W PET127P32606 800 aa2.57□□□□□ -2
UBP1YDL122W YEL025CP39991 1188 aa2.57□□□□□ -2
UBP1YDL122W CHS6P40955 746 aa2.57□□□□□ -2
UBP1YDL122W TRS120Q04183 1289 aa2.57□□□□□ -2
UBP1YDL122W SWI5P08153 709 aa2.57□□□□□ -2
UBP1YDL122W SEC18P18759 758 aaKnown RBP2.57□□□□□ -2
UBP1YDL122W YCL042WP25572 119 aa2.57□□□□□ -2
UBP1YDL122W MCM2P29469 868 aa2.57□□□□□ -2
UBP1YDL122W RPT1P33299 467 aaKnown RBP2.57□□□□□ -2
UBP1YDL122W YKL050CP35736 922 aa2.57□□□□□ -2
UBP1YDL122W DID4P36108 232 aa2.57□□□□□ -2
UBP1YDL122W SHM1P37292 490 aaPredicted RBP2.57□□□□□ -2
UBP1YDL122W AIM9P40053 627 aaKnown RBP2.57□□□□□ -2
UBP1YDL122W ASG1P40467 964 aa2.57□□□□□ -2
UBP1YDL122W MUK1Q02866 612 aa2.57□□□□□ -2
UBP1YDL122W GDE1Q02979 1223 aa2.57□□□□□ -2
UBP1YDL122W VPS16Q03308 798 aa2.57□□□□□ -2
UBP1YDL122W SPR28Q04921 423 aa2.57□□□□□ -2
UBP1YDL122W YOL024WQ08172 172 aa2.57□□□□□ -2
UBP1YDL122W THI72Q08579 599 aa2.57□□□□□ -2
UBP1YDL122W CIT2P08679 460 aa2.56□□□□□ -2
UBP1YDL122W PDC6P26263 563 aaKnown RBP2.56□□□□□ -2
UBP1YDL122W PEP7P32609 515 aa2.56□□□□□ -2
UBP1YDL122W TCD2P36101 447 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms