RNA–Protein interactions for RNA: YDL105W

NSE4, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE4, Length 1,209 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE4	YDL105W	COQ11	Q05892	277 aa		4.64	□□□□□ -1.67
NSE4	YDL105W	ENV7	Q12003	364 aa		4.64	□□□□□ -1.67
NSE4	YDL105W	HBN1	Q96VH4	193 aa		4.64	□□□□□ -1.67
NSE4	YDL105W	MSD1	P15179	658 aa	Known RBP	4.63	□□□□□ -1.67
NSE4	YDL105W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
NSE4	YDL105W	PZF1	P39933	429 aa		4.63	□□□□□ -1.67
NSE4	YDL105W	MUP1	P50276	574 aa		4.63	□□□□□ -1.67
NSE4	YDL105W	UBX5	Q06682	500 aa		4.63	□□□□□ -1.67
NSE4	YDL105W	CDC53	Q12018	815 aa	Known RBP	4.63	□□□□□ -1.67
NSE4	YDL105W	YOR131C	Q12486	218 aa		4.63	□□□□□ -1.67
NSE4	YDL105W	PRP4	P20053	465 aa	Known RBP	4.62	□□□□□ -1.67
NSE4	YDL105W	HCA4	P20448	770 aa	Known RBP	4.62	□□□□□ -1.67
NSE4	YDL105W	ARE1	P25628	610 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	PPZ2	P33329	710 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	TDP1	P38319	544 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	IMO32	P53219	342 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	AFT2	Q08957	416 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	HAL9	Q12180	1030 aa		4.62	□□□□□ -1.67
NSE4	YDL105W	TUB1	P09733	447 aa	Known RBP	4.61	□□□□□ -1.67
NSE4	YDL105W	CDC43	P18898	376 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	HSP60	P19882	572 aa	Known RBP	4.61	□□□□□ -1.67
NSE4	YDL105W	HUL5	P53119	910 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	YGR125W	P53273	1036 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	MRPS35	P53292	345 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	NSE3	Q05541	303 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	CRR1	Q05790	422 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	SUT2	Q12286	268 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	YNL162W-A	Q3E7A8	72 aa		4.61	□□□□□ -1.67
NSE4	YDL105W	YBR053C	P38235	358 aa		4.6	□□□□□ -1.67
NSE4	YDL105W	NRG1	Q03125	231 aa		4.6	□□□□□ -1.67
NSE4	YDL105W	MUS81	Q04149	632 aa	Predicted RBP	4.6	□□□□□ -1.67
NSE4	YDL105W	BNR1	P40450	1375 aa		4.6	□□□□□ -1.67
NSE4	YDL105W	PRC1	P00729	532 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	YKL091C	P33324	310 aa	Known RBP	4.59	□□□□□ -1.67
NSE4	YDL105W	EMC3	P36039	253 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	RIX1	P38883	763 aa	Predicted RBP	4.59	□□□□□ -1.67
NSE4	YDL105W	YTA7	P40340	1379 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	YIR042C	P40586	236 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	HUL4	P40985	892 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	UBP6	P43593	499 aa	Known RBP	4.59	□□□□□ -1.67
NSE4	YDL105W	YJL163C	P46996	555 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	SSY5	P47002	699 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	RIA1	P53893	1110 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	FLC1	Q08967	793 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.67
NSE4	YDL105W	YLR415C	O13578	112 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	CIT1	P00890	479 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	GGA2	P38817	585 aa	Known RBP	4.58	□□□□□ -1.68
NSE4	YDL105W	SAK1	P38990	1142 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	TAH11	P47112	604 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	VPS73	P53142	486 aa	Known RBP	4.58	□□□□□ -1.68
NSE4	YDL105W	DAM1	P53267	343 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	RSC3	Q06639	885 aa		4.58	□□□□□ -1.68
NSE4	YDL105W	YDL124W	Q07551	312 aa	Known RBP	4.58	□□□□□ -1.68
NSE4	YDL105W	TOP3	P13099	656 aa		4.57	□□□□□ -1.68
NSE4	YDL105W	SAP190	P36123	1033 aa		4.57	□□□□□ -1.68
NSE4	YDL105W	OSW7	P43611	510 aa		4.57	□□□□□ -1.68
NSE4	YDL105W	TAD1	P53065	400 aa		4.57	□□□□□ -1.68
NSE4	YDL105W	FPR4	Q06205	392 aa	Predicted RBP	4.57	□□□□□ -1.68
NSE4	YDL105W	ICT1	Q12385	394 aa		4.57	□□□□□ -1.68
NSE4	YDL105W	LAT1	P12695	482 aa	Known RBP	4.56	□□□□□ -1.68
NSE4	YDL105W	MDM10	P18409	493 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	GAL11	P19659	1081 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	YHR020W	P38708	688 aa	Known RBP	4.56	□□□□□ -1.68
NSE4	YDL105W	PCL5	P38794	229 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	YIL166C	P40445	542 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	PFA3	P42836	336 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	YGR283C	P53336	341 aa	Predicted RBP	4.56	□□□□□ -1.68
NSE4	YDL105W	RPN4	Q03465	531 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
NSE4	YDL105W	KIN3	P22209	435 aa		4.55	□□□□□ -1.68
NSE4	YDL105W	RSP5	P39940	809 aa	Known RBP	4.55	□□□□□ -1.68
NSE4	YDL105W	CHZ1	P40019	153 aa	Predicted RBP	4.55	□□□□□ -1.68
NSE4	YDL105W	HSV2	P50079	448 aa	Predicted RBP	4.55	□□□□□ -1.68
NSE4	YDL105W	LRS4	Q04087	347 aa	Known RBP	4.55	□□□□□ -1.68
NSE4	YDL105W	THI21	Q08975	551 aa		4.55	□□□□□ -1.68
NSE4	YDL105W	MET6	P05694	767 aa	Known RBP	4.54	□□□□□ -1.68
NSE4	YDL105W	TOM70	P07213	617 aa	Known RBP	4.54	□□□□□ -1.68
NSE4	YDL105W	YCL002C	P25565	263 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	SIC1	P38634	284 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	SET5	P38890	526 aa	Known RBP	4.54	□□□□□ -1.68
NSE4	YDL105W	YDR514C	Q04408	483 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	YAP7	Q08182	245 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	SGO1	Q08490	590 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	IRC13	Q08630	104 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	ATG11	Q12527	1178 aa		4.54	□□□□□ -1.68
NSE4	YDL105W	FMP52	P40008	231 aa		4.53	□□□□□ -1.68
NSE4	YDL105W	GYP8	P43570	497 aa		4.53	□□□□□ -1.68
NSE4	YDL105W	TAF8	Q03750	510 aa		4.53	□□□□□ -1.68
NSE4	YDL105W	ARO10	Q06408	635 aa		4.53	□□□□□ -1.68
NSE4	YDL105W	CAN1	P04817	590 aa		4.52	□□□□□ -1.69
NSE4	YDL105W	HIS7	P33734	552 aa	Known RBP	4.52	□□□□□ -1.69
NSE4	YDL105W	FLO10	P36170	1169 aa		4.52	□□□□□ -1.69
NSE4	YDL105W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
NSE4	YDL105W	YBR259W	P38338	688 aa		4.52	□□□□□ -1.69
NSE4	YDL105W	MTR3	P48240	250 aa	Predicted RBP	4.52	□□□□□ -1.69
NSE4	YDL105W	ZDS1	P50111	915 aa	Known RBP	4.52	□□□□□ -1.69
NSE4	YDL105W	SSL2	Q00578	843 aa		4.52	□□□□□ -1.69
NSE4	YDL105W	TGL5	Q12043	749 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms