RNA–Protein interactions for RNA: YCL004W

PGS1, Transcript of Phosphatidylglycerolphosphate synthase, yeast

Gene PGS1, Length 1,566 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGS1	YCL004W	OAF1	P39720	1047 aa	Predicted RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	ACA1	P39970	489 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	NPY1	P53164	384 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	PEX13	P80667	386 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	TSR2	Q06672	205 aa	Known RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	MSS18	P08593	268 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	MSD1	P15179	658 aa	Known RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	HEM12	P32347	362 aa	Predicted RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	PET10	P36139	283 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	LAM1	P38851	1228 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	YGL176C	P46945	554 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	HNT2	P49775	206 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	SPT20	P50875	604 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	GCN5	Q03330	439 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	TRS130	Q03660	1102 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	SXM1	Q04175	944 aa	Known RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	GRC3	Q07845	632 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	SDH5	Q08230	162 aa		4.27	□□□□□ -1.73
PGS1	YCL004W	NEW1	Q08972	1196 aa	Known RBP	4.27	□□□□□ -1.73
PGS1	YCL004W	COQ4	O13525	335 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	SFL1	P20134	766 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	URA1	P28272	314 aa	Predicted RBP	4.26	□□□□□ -1.73
PGS1	YCL004W	DAL3	P32459	195 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	YKL107W	P34251	309 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	ADD66	P36040	267 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	MEF2	P39677	819 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	SIP5	P40210	489 aa	Known RBP	4.26	□□□□□ -1.73
PGS1	YCL004W	HIS6	P40545	261 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PGS1	YCL004W	YNR063W	P53749	607 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	CIA1	Q05583	330 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	PHM6	Q05637	104 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	OPY2	Q06810	360 aa		4.26	□□□□□ -1.73
PGS1	YCL004W	YTM1	Q12024	460 aa	Predicted RBP	4.26	□□□□□ -1.73
PGS1	YCL004W	RAD18	P10862	487 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	HOM3	P10869	527 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	CHS3	P29465	1165 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	PRP19	P32523	503 aa	Known RBP	4.25	□□□□□ -1.73
PGS1	YCL004W	DOM34	P33309	386 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	YBR284W	P38150	797 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	CKB2	P38930	258 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	MEP3	P53390	489 aa		4.25	□□□□□ -1.73
PGS1	YCL004W	DBP5	P20449	482 aa	Known RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	CCZ1	P38273	704 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	PCM1	P38628	557 aa	Known RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	APE4	P38821	490 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	SAH1	P39954	449 aa	Known RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	GZF3	P42944	551 aa	Known RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	QRI7	P43122	407 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	ALG2	P43636	503 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	RSC1	P53236	928 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	VPS30	Q02948	557 aa		4.24	□□□□□ -1.73
PGS1	YCL004W	IMH1	Q06704	911 aa	Known RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	CLF1	Q12309	687 aa	Predicted RBP	4.24	□□□□□ -1.73
PGS1	YCL004W	SYP1	P25623	870 aa	Known RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	SPC29	P33419	253 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	TRM2	P33753	639 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	PES4	P39684	611 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	VPS8	P39702	1274 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	SIT1	P39980	628 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	MPH1	P40562	993 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	ERR3	P42222	437 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	VTC2	P43585	828 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	GTR1	Q00582	310 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	SPC19	Q03954	165 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	RCL1	Q08096	367 aa	Predicted RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	HSP82	P02829	709 aa	Known RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	YER152C	P10356	443 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	ECM32	P32644	1121 aa	Known RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	BEM3	P32873	1128 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	BIT2	P38346	545 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	CAF16	P43569	289 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	CNN1	P43618	361 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	TNA1	P53322	534 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	HOL1	P53389	586 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	RAT1	Q02792	1006 aa	Known RBP	4.23	□□□□□ -1.73
PGS1	YCL004W	COG8	Q04632	607 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	IRC3	Q06683	689 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	PSR1	Q07800	427 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	PUS9	Q12069	462 aa		4.23	□□□□□ -1.73
PGS1	YCL004W	CYC1	P00044	109 aa	Predicted RBP	4.22	□□□□□ -1.73
PGS1	YCL004W	NOP4	P37838	685 aa	Known RBP	4.22	□□□□□ -1.73
PGS1	YCL004W	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	IML2	P47031	731 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	DUS4	Q06063	367 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	YLR352W	Q06479	807 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	SPN1	Q06505	410 aa	Predicted RBP	4.22	□□□□□ -1.73
PGS1	YCL004W	GUD1	Q07729	489 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	RMP1	Q12530	201 aa		4.22	□□□□□ -1.73
PGS1	YCL004W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PGS1	YCL004W	TPM1	P17536	199 aa	Known RBP	4.21	□□□□□ -1.74
PGS1	YCL004W	MSM1	P22438	575 aa		4.21	□□□□□ -1.74
PGS1	YCL004W	KIP1	P28742	1111 aa		4.21	□□□□□ -1.74
PGS1	YCL004W	AFR1	P33304	620 aa		4.21	□□□□□ -1.74
PGS1	YCL004W	STO1	P34160	861 aa	Known RBP	4.21	□□□□□ -1.74
PGS1	YCL004W	PIK1	P39104	1066 aa		4.21	□□□□□ -1.74
PGS1	YCL004W	CCT5	P40413	562 aa	Known RBP	4.21	□□□□□ -1.74
PGS1	YCL004W	SGM1	P47166	707 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms