RNA–Protein interactions for RNA: YBR234C

ARC40, Transcript of Subunit of the ARP2/3 complex, yeast

Gene ARC40, Length 1,155 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARC40	YBR234C	MRD1	Q06106	887 aa	Known RBP	4.9	□□□□□ -1.63
ARC40	YBR234C	TDA5	Q06417	326 aa	Known RBP	4.9	□□□□□ -1.63
ARC40	YBR234C	SPO75	Q07798	868 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	YAP7	Q08182	245 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	APL5	Q08951	932 aa	Known RBP	4.9	□□□□□ -1.63
ARC40	YBR234C	TIP41	Q12199	356 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	SMC6	Q12749	1114 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	YOR111W	Q99210	232 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	UTP10	P42945	1769 aa	Known RBP	4.9	□□□□□ -1.63
ARC40	YBR234C	POM152	P39685	1337 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	SAC3	P46674	1301 aa		4.9	□□□□□ -1.63
ARC40	YBR234C	TUF1	P02992	437 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	ARG4	P04076	463 aa	Predicted RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	PMR1	P13586	950 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	ALG1	P16661	449 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	ARG1	P22768	420 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	MLF3	P32047	452 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	PDB1	P32473	366 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	KTR2	P33550	425 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	UGA2	P38067	497 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	SPP381	P38282	291 aa	Predicted RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	HXT5	P38695	592 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
ARC40	YBR234C	RGA1	P39083	1007 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	CSM2	P40465	213 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	YIR007W	P40566	764 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	ROG3	P43602	733 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	ALG2	P43636	503 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	YNL165W	P53891	406 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	NAN1	Q02931	896 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	URH1	Q04179	340 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	TY1A-MR1	Q04215	440 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	YDR341C	Q05506	607 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	UTP4	Q06679	776 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	CSR1	Q06705	408 aa	Known RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	NOC3	Q07896	663 aa	Predicted RBP	4.89	□□□□□ -1.63
ARC40	YBR234C	YPL216W	Q08964	1102 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	PLP2	Q12017	286 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	Q0182	Q9ZZW1	134 aa		4.89	□□□□□ -1.63
ARC40	YBR234C	COB	P00163	385 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	CYB2	P00175	591 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	RPS31	P05759	152 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	GAL11	P19659	1081 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	MAK31	P23059	88 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ARC40	YBR234C	SEC14	P24280	304 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	CDC10	P25342	322 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	SQT1	P35184	431 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	YKR018C	P36114	725 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	ERG7	P38604	731 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	TDA3	P38758	523 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	MRX1	P40050	688 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	SEC26	P41810	973 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	UBA2	P52488	636 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	SDA1	P53313	767 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	ADA2	Q02336	434 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	UBX2	Q04228	584 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	SMD2	Q06217	110 aa	Known RBP	4.88	□□□□□ -1.63
ARC40	YBR234C	THI3	Q07471	609 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	DAS2	Q12084	232 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	YLR125W	Q12138	136 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	TY4A-H	Q6Q5P6	413 aa		4.88	□□□□□ -1.63
ARC40	YBR234C	KRS1	P15180	591 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	OM45	P16547	393 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	RNR3	P21672	869 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	RIT1	P23796	513 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	MGM1	P32266	881 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	THI4	P32318	326 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	HXT1	P32465	570 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	GCG1	P32656	232 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	SMC1	P32908	1225 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	UBC6	P33296	250 aa	Predicted RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	MYO3	P36006	1272 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	OAF3	P36023	863 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	JNM1	P36224	373 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	CRP1	P38845	465 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	SET5	P38890	526 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	STT3	P39007	718 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	CCT2	P39076	527 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	VTC2	P43585	828 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	ILM1	P47155	203 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	ZPR1	P53303	486 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	NCS2	P53923	493 aa	Predicted RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	NAM8	Q00539	523 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	PRP42	Q03776	544 aa	Known RBP	4.87	□□□□□ -1.63
ARC40	YBR234C	SIL1	Q08199	421 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	YDL176W	Q12027	708 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	NYV1	Q12255	253 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	ZRT2	Q12436	422 aa		4.87	□□□□□ -1.63
ARC40	YBR234C	YRF1-3	P0CX14	1859 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	YRF1-7	P0CX15	1859 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	YRF1-6	P53819	1859 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	CIT1	P00890	479 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	RAD3	P06839	778 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	NUC1	P08466	329 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	CDC34	P14682	295 aa		4.86	□□□□□ -1.63
ARC40	YBR234C	THR4	P16120	514 aa	Known RBP	4.86	□□□□□ -1.63
ARC40	YBR234C	RPC53	P25441	422 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms