RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W VPS8P39702 1274 aa5.91□□□□□ -1.46
PRE7YBL041W YJL045WP47052 634 aa5.91□□□□□ -1.46
PRE7YBL041W RSM26P47141 266 aa5.91□□□□□ -1.46
PRE7YBL041W MRPL22P53881 309 aa5.91□□□□□ -1.46
PRE7YBL041W DAL4Q04895 635 aa5.91□□□□□ -1.46
PRE7YBL041W NKP2Q06162 153 aa5.91□□□□□ -1.46
PRE7YBL041W MET7Q08645 548 aa5.91□□□□□ -1.46
PRE7YBL041W PRE10P21242 288 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
PRE7YBL041W YKR018CP36114 725 aa5.9□□□□□ -1.46
PRE7YBL041W MAL31P38156 614 aa5.9□□□□□ -1.46
PRE7YBL041W GIP4P39732 760 aa5.9□□□□□ -1.46
PRE7YBL041W YNR063WP53749 607 aa5.9□□□□□ -1.46
PRE7YBL041W ALD6P54115 500 aaKnown RBP5.9□□□□□ -1.46
PRE7YBL041W RPS15Q01855 142 aaKnown RBP5.9□□□□□ -1.46
PRE7YBL041W SSF2Q12153 453 aaPredicted RBP5.9□□□□□ -1.46
PRE7YBL041W WHI5Q12416 295 aa5.9□□□□□ -1.46
PRE7YBL041W CHO2P05374 869 aaKnown RBP5.89□□□□□ -1.47
PRE7YBL041W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
PRE7YBL041W SAM2P19358 384 aaKnown RBP5.89□□□□□ -1.47
PRE7YBL041W RGT1P32862 1170 aa5.89□□□□□ -1.47
PRE7YBL041W RDH54P38086 958 aa5.89□□□□□ -1.47
PRE7YBL041W PEX28P38848 579 aa5.89□□□□□ -1.47
PRE7YBL041W AIM21P40563 679 aa5.89□□□□□ -1.47
PRE7YBL041W DAK2P43550 591 aa5.89□□□□□ -1.47
PRE7YBL041W ECM30Q06673 1274 aa5.89□□□□□ -1.47
PRE7YBL041W RAD50P12753 1312 aa5.89□□□□□ -1.47
PRE7YBL041W ECM29P38737 1868 aa5.89□□□□□ -1.47
PRE7YBL041W RAD18P10862 487 aa5.88□□□□□ -1.47
PRE7YBL041W VMA4P22203 233 aaKnown RBP5.88□□□□□ -1.47
PRE7YBL041W PRO3P32263 286 aaKnown RBP5.88□□□□□ -1.47
PRE7YBL041W VPS35P34110 944 aa5.88□□□□□ -1.47
PRE7YBL041W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
PRE7YBL041W MYO3P36006 1272 aa5.88□□□□□ -1.47
PRE7YBL041W PHO88P38264 188 aaPredicted RBP5.88□□□□□ -1.47
PRE7YBL041W FAA3P39002 694 aa5.88□□□□□ -1.47
PRE7YBL041W YGR125WP53273 1036 aa5.88□□□□□ -1.47
PRE7YBL041W DUS4Q06063 367 aa5.88□□□□□ -1.47
PRE7YBL041W HRK1Q08732 759 aaKnown RBP5.88□□□□□ -1.47
PRE7YBL041W YOR131CQ12486 218 aa5.88□□□□□ -1.47
PRE7YBL041W RIT1P23796 513 aa5.87□□□□□ -1.47
PRE7YBL041W GCD6P32501 712 aaKnown RBP5.87□□□□□ -1.47
PRE7YBL041W UTR4P32626 227 aa5.87□□□□□ -1.47
PRE7YBL041W SQT1P35184 431 aa5.87□□□□□ -1.47
PRE7YBL041W FOL1P53848 824 aa5.87□□□□□ -1.47
PRE7YBL041W RIM20Q12033 661 aa5.87□□□□□ -1.47
PRE7YBL041W SUT2Q12286 268 aa5.87□□□□□ -1.47
PRE7YBL041W CLF1Q12309 687 aaPredicted RBP5.87□□□□□ -1.47
PRE7YBL041W MDM20Q12387 796 aaKnown RBP5.87□□□□□ -1.47
PRE7YBL041W ACE2P21192 770 aa5.86□□□□□ -1.47
PRE7YBL041W ANP1P32629 500 aa5.86□□□□□ -1.47
PRE7YBL041W TGL1P34163 548 aa5.86□□□□□ -1.47
PRE7YBL041W UIP5P36137 443 aa5.86□□□□□ -1.47
PRE7YBL041W AAP1P37898 856 aaKnown RBP5.86□□□□□ -1.47
PRE7YBL041W PPX1P38698 397 aa5.86□□□□□ -1.47
PRE7YBL041W HSE1P38753 452 aa5.86□□□□□ -1.47
PRE7YBL041W TOM71P38825 639 aaKnown RBP5.86□□□□□ -1.47
PRE7YBL041W CRG1P38892 291 aaRIP-Chip data5.86□□□□□ -1.47not detected
PRE7YBL041W YJR107WP47145 328 aa5.86□□□□□ -1.47
PRE7YBL041W YGL140CP53120 1219 aa5.86□□□□□ -1.47
PRE7YBL041W BRE5P53741 515 aaKnown RBP5.86□□□□□ -1.47
PRE7YBL041W YPL109CQ02981 657 aa5.86□□□□□ -1.47
PRE7YBL041W SPN1Q06505 410 aaPredicted RBP5.86□□□□□ -1.47
PRE7YBL041W VAS1P07806 1104 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W NUC1P08466 329 aa5.85□□□□□ -1.47
PRE7YBL041W SAM1P10659 382 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W SRP40P32583 406 aaPredicted RBP5.85□□□□□ -1.47
PRE7YBL041W AIM26P32858 118 aa5.85□□□□□ -1.47
PRE7YBL041W KSP1P38691 1029 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W QNS1P38795 714 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W VPS45P38932 577 aa5.85□□□□□ -1.47
PRE7YBL041W AFG3P39925 761 aa5.85□□□□□ -1.47
PRE7YBL041W YFL040WP43562 540 aa5.85□□□□□ -1.47
PRE7YBL041W RIM8P53179 542 aa5.85□□□□□ -1.47
PRE7YBL041W RPT6Q01939 405 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W FMP30Q02883 468 aa5.85□□□□□ -1.47
PRE7YBL041W VPS30Q02948 557 aa5.85□□□□□ -1.47
PRE7YBL041W BUL2Q03758 920 aaKnown RBP5.85□□□□□ -1.47
PRE7YBL041W SPH1Q06160 661 aa5.85□□□□□ -1.47
PRE7YBL041W TPM1P17536 199 aaKnown RBP5.84□□□□□ -1.47
PRE7YBL041W MAK31P23059 88 aa5.84□□□□□ -1.47
PRE7YBL041W RPL8BP29453 256 aaKnown RBP5.84□□□□□ -1.47
PRE7YBL041W BCS1P32839 456 aa5.84□□□□□ -1.47
PRE7YBL041W RER2P35196 286 aa5.84□□□□□ -1.47
PRE7YBL041W MYO5Q04439 1219 aaKnown RBP5.84□□□□□ -1.47
PRE7YBL041W TMA64Q04600 565 aaKnown RBP5.84□□□□□ -1.47
PRE7YBL041W FPR4Q06205 392 aaPredicted RBP5.84□□□□□ -1.47
PRE7YBL041W RCL1Q08096 367 aaPredicted RBP5.84□□□□□ -1.47
PRE7YBL041W SEC23P15303 768 aaKnown RBP5.83□□□□□ -1.48
PRE7YBL041W SEC20P28791 383 aa5.83□□□□□ -1.48
PRE7YBL041W HDA1P53973 706 aa5.83□□□□□ -1.48
PRE7YBL041W ADI1Q03677 179 aa5.83□□□□□ -1.48
PRE7YBL041W RKM2Q03942 479 aa5.83□□□□□ -1.48
PRE7YBL041W DUS3Q06053 668 aaKnown RBP5.83□□□□□ -1.48
PRE7YBL041W GUD1Q07729 489 aa5.83□□□□□ -1.48
PRE7YBL041W YPL277CQ08989 487 aa5.83□□□□□ -1.48
PRE7YBL041W SRP54P20424 541 aaKnown RBP5.82□□□□□ -1.48
PRE7YBL041W SRO9P25567 434 aaKnown RBP5.82□□□□□ -1.48
PRE7YBL041W YSC84P32793 468 aa5.82□□□□□ -1.48
PRE7YBL041W TIM23P32897 222 aa5.82□□□□□ -1.48
PRE7YBL041W TOD6P34219 525 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms