RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR41, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR41	snR41	UTP8	P53276	713 aa	Known RBP	4.19	□□□□□ -1.74
snR41	snR41	HDA1	P53973	706 aa		4.19	□□□□□ -1.74
snR41	snR41	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
snR41	snR41	OMS1	Q06668	471 aa		4.19	□□□□□ -1.74
snR41	snR41	FMP25	Q08023	583 aa		4.19	□□□□□ -1.74
snR41	snR41	TUB3	P09734	445 aa	Known RBP	4.18	□□□□□ -1.74
snR41	snR41	CTF13	P35203	478 aa		4.18	□□□□□ -1.74
snR41	snR41	RNT1	Q02555	471 aa		4.18	□□□□□ -1.74
snR41	snR41	RPD3	P32561	433 aa		4.17	□□□□□ -1.74
snR41	snR41	REC104	P33323	182 aa		4.17	□□□□□ -1.74
snR41	snR41	PAM1	P37304	830 aa	Known RBP	4.17	□□□□□ -1.74
snR41	snR41	ERT1	P38140	529 aa		4.17	□□□□□ -1.74
snR41	snR41	UBA2	P52488	636 aa		4.17	□□□□□ -1.74
snR41	snR41	YKR011C	Q02209	353 aa		4.17	□□□□□ -1.74
snR41	snR41	PEX19	Q07418	342 aa		4.17	□□□□□ -1.74
snR41	snR41	TRM13	Q12383	476 aa		4.17	□□□□□ -1.74
snR41	snR41	PPR1	P07272	904 aa	Predicted RBP	4.16	□□□□□ -1.74
snR41	snR41	RFA1	P22336	621 aa	Known RBP	4.16	□□□□□ -1.74
snR41	snR41	TYE7	P33122	291 aa	Predicted RBP	4.16	□□□□□ -1.74
snR41	snR41	YIL108W	P40483	696 aa	Known RBP	4.16	□□□□□ -1.74
snR41	snR41	QRI1	P43123	477 aa	Known RBP	4.16	□□□□□ -1.74
snR41	snR41	TMN2	Q04562	672 aa		4.16	□□□□□ -1.74
snR41	snR41	TRM11	Q12463	433 aa		4.16	□□□□□ -1.74
snR41	snR41	ALG7	P07286	448 aa		4.15	□□□□□ -1.75
snR41	snR41	URA1	P28272	314 aa	Predicted RBP	4.15	□□□□□ -1.75
snR41	snR41	CDC11	P32458	415 aa		4.15	□□□□□ -1.75
snR41	snR41	PET10	P36139	283 aa		4.15	□□□□□ -1.75
snR41	snR41	STB4	P50104	949 aa		4.15	□□□□□ -1.75
snR41	snR41	MCH5	Q08777	521 aa		4.15	□□□□□ -1.75
snR41	snR41	ACF2	Q12168	779 aa		4.15	□□□□□ -1.75
snR41	snR41	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
snR41	snR41	ENV7	Q12003	364 aa		4.14	□□□□□ -1.75
snR41	snR41	SSF2	Q12153	453 aa	Predicted RBP	4.14	□□□□□ -1.75
snR41	snR41	YPR071W	Q12346	211 aa		4.14	□□□□□ -1.75
snR41	snR41	SWM1	Q12379	170 aa		4.14	□□□□□ -1.75
snR41	snR41	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
snR41	snR41	GRX1	P25373	110 aa	Known RBP	4.13	□□□□□ -1.75
snR41	snR41	ALR2	P43553	858 aa		4.13	□□□□□ -1.75
snR41	snR41	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
snR41	snR41	NAN1	Q02931	896 aa	Known RBP	4.13	□□□□□ -1.75
snR41	snR41	MPH2	P0CD99	609 aa		4.12	□□□□□ -1.75
snR41	snR41	PRP4	P20053	465 aa	Known RBP	4.12	□□□□□ -1.75
snR41	snR41	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
snR41	snR41	CEP3	P40969	608 aa		4.12	□□□□□ -1.75
snR41	snR41	STU2	P46675	888 aa		4.12	□□□□□ -1.75
snR41	snR41	ERP6	P53198	216 aa		4.12	□□□□□ -1.75
snR41	snR41	TIM44	Q01852	431 aa		4.12	□□□□□ -1.75
snR41	snR41	SPO75	Q07798	868 aa		4.12	□□□□□ -1.75
snR41	snR41	IRC10	Q08118	586 aa		4.12	□□□□□ -1.75
snR41	snR41	MET3	P08536	511 aa		4.11	□□□□□ -1.75
snR41	snR41	MSD1	P15179	658 aa	Known RBP	4.11	□□□□□ -1.75
snR41	snR41	YBR284W	P38150	797 aa		4.11	□□□□□ -1.75
snR41	snR41	ELO3	P40319	345 aa		4.11	□□□□□ -1.75
snR41	snR41	ASI2	P53895	289 aa		4.11	□□□□□ -1.75
snR41	snR41	MUK1	Q02866	612 aa		4.11	□□□□□ -1.75
snR41	snR41	DLT1	Q04216	342 aa		4.11	□□□□□ -1.75
snR41	snR41	ADY4	Q05955	493 aa		4.11	□□□□□ -1.75
snR41	snR41	FRE5	Q08908	694 aa		4.11	□□□□□ -1.75
snR41	snR41	WRS1	Q12109	432 aa	Known RBP	4.11	□□□□□ -1.75
snR41	snR41	RPP1	P38786	293 aa		4.1	□□□□□ -1.75
snR41	snR41	NOG2	P53742	486 aa	Known RBP	4.1	□□□□□ -1.75
snR41	snR41	EAF1	Q06337	982 aa		4.1	□□□□□ -1.75
snR41	snR41	UBX5	Q06682	500 aa		4.1	□□□□□ -1.75
snR41	snR41	RPS9A	O13516	197 aa	Known RBP	4.09	□□□□□ -1.75
snR41	snR41	CYS3	P31373	394 aa	Known RBP	4.09	□□□□□ -1.75
snR41	snR41	MTH1	P35198	433 aa		4.09	□□□□□ -1.75
snR41	snR41	MRPS35	P53292	345 aa		4.09	□□□□□ -1.75
snR41	snR41	DUS1	P53759	423 aa	Known RBP	4.09	□□□□□ -1.75
snR41	snR41	YML122C	Q03207	126 aa		4.09	□□□□□ -1.75
snR41	snR41	CAF20	P12962	161 aa	Known RBP	4.08	□□□□□ -1.76
snR41	snR41	EMC3	P36039	253 aa		4.08	□□□□□ -1.76
snR41	snR41	PPS1	P38148	807 aa		4.08	□□□□□ -1.76
snR41	snR41	YBR053C	P38235	358 aa		4.08	□□□□□ -1.76
snR41	snR41	YHL017W	P38745	532 aa		4.08	□□□□□ -1.76
snR41	snR41	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
snR41	snR41	UBP6	P43593	499 aa	Known RBP	4.08	□□□□□ -1.76
snR41	snR41	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
snR41	snR41	MUP1	P50276	574 aa		4.08	□□□□□ -1.76
snR41	snR41	GND2	P53319	492 aa		4.08	□□□□□ -1.76
snR41	snR41	YMR206W	Q03695	313 aa		4.08	□□□□□ -1.76
snR41	snR41	HAL9	Q12180	1030 aa		4.08	□□□□□ -1.76
snR41	snR41	CIT1	P00890	479 aa		4.07	□□□□□ -1.76
snR41	snR41	TOP3	P13099	656 aa		4.07	□□□□□ -1.76
snR41	snR41	HSP60	P19882	572 aa	Known RBP	4.07	□□□□□ -1.76
snR41	snR41	SDS3	P40505	327 aa		4.07	□□□□□ -1.76
snR41	snR41	FKH2	P41813	862 aa		4.07	□□□□□ -1.76
snR41	snR41	NIT3	P49954	291 aa		4.07	□□□□□ -1.76
snR41	snR41	AMA1	P50082	593 aa		4.07	□□□□□ -1.76
snR41	snR41	PUS2	P53167	370 aa		4.07	□□□□□ -1.76
snR41	snR41	YGR283C	P53336	341 aa	Predicted RBP	4.07	□□□□□ -1.76
snR41	snR41	MUS81	Q04149	632 aa	Predicted RBP	4.07	□□□□□ -1.76
snR41	snR41	HBT1	Q07653	1046 aa	Known RBP	4.07	□□□□□ -1.76
snR41	snR41	RAD4	P14736	754 aa		4.06	□□□□□ -1.76
snR41	snR41	ARE1	P25628	610 aa		4.06	□□□□□ -1.76
snR41	snR41	NGG1	P32494	702 aa		4.06	□□□□□ -1.76
snR41	snR41	SPC42	P36094	363 aa		4.06	□□□□□ -1.76
snR41	snR41	TAF8	Q03750	510 aa		4.06	□□□□□ -1.76
snR41	snR41	THI21	Q08975	551 aa		4.06	□□□□□ -1.76
snR41	snR41	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
snR41	snR41	OSH2	Q12451	1283 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms