RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeastyeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDB1YPR184W ATG20Q07528 640 aa5.35□□□□□ -1.55
GDB1YPR184W FMP25Q08023 583 aa5.35□□□□□ -1.55
GDB1YPR184W NTO1Q12311 748 aa5.35□□□□□ -1.55
GDB1YPR184W RVS161P25343 265 aaKnown RBP5.35□□□□□ -1.55
GDB1YPR184W KRE2P27809 442 aa5.35□□□□□ -1.55
GDB1YPR184W COG6P53959 839 aa5.35□□□□□ -1.55
GDB1YPR184W HEH2Q03281 663 aa5.35□□□□□ -1.55
GDB1YPR184W TOS4Q06266 489 aa5.35□□□□□ -1.55
GDB1YPR184W YDL129WQ07555 291 aa5.35□□□□□ -1.55
GDB1YPR184W CMR1Q12510 522 aaKnown RBP5.35□□□□□ -1.55
GDB1YPR184W PCK1P10963 549 aa5.35□□□□□ -1.55
GDB1YPR184W AEP2P22136 580 aa5.35□□□□□ -1.55
GDB1YPR184W MRC1P25588 1096 aa5.35□□□□□ -1.55
GDB1YPR184W SEC21P32074 935 aaKnown RBP5.35□□□□□ -1.55
GDB1YPR184W RTA1P53047 317 aa5.35□□□□□ -1.55
GDB1YPR184W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
GDB1YPR184W UTP6Q02354 440 aaKnown RBP5.35□□□□□ -1.55
GDB1YPR184W RDS1P25611 832 aa5.35□□□□□ -1.55
GDB1YPR184W GIC1P38785 314 aa5.35□□□□□ -1.55
GDB1YPR184W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
GDB1YPR184W TFB4Q12004 338 aa5.35□□□□□ -1.55
GDB1YPR184W SIR1P21691 654 aa5.34□□□□□ -1.55
GDB1YPR184W GYP6P32806 458 aa5.34□□□□□ -1.55
GDB1YPR184W POP4P38336 279 aa5.34□□□□□ -1.55
GDB1YPR184W BEM4P39011 633 aa5.34□□□□□ -1.55
GDB1YPR184W VPS75P53853 264 aa5.34□□□□□ -1.55
GDB1YPR184W YNL144CP53907 740 aa5.34□□□□□ -1.55
GDB1YPR184W IRC4Q03036 179 aa5.34□□□□□ -1.55
GDB1YPR184W YCS4Q06156 1176 aa5.34□□□□□ -1.55
GDB1YPR184W GET3Q12154 354 aaKnown RBP5.34□□□□□ -1.55
GDB1YPR184W NOT5Q12514 560 aaPredicted RBP5.34□□□□□ -1.55
GDB1YPR184W ARG82P07250 355 aa5.34□□□□□ -1.55
GDB1YPR184W VPH1P32563 840 aaKnown RBP5.34□□□□□ -1.55
GDB1YPR184W SWI3P32591 825 aa5.34□□□□□ -1.55
GDB1YPR184W MRPL40P36534 297 aa5.34□□□□□ -1.55
GDB1YPR184W MVP1P40959 511 aaKnown RBP5.34□□□□□ -1.55
GDB1YPR184W HFM1P51979 1187 aa5.34□□□□□ -1.55
GDB1YPR184W RSC3Q06639 885 aa5.34□□□□□ -1.55
GDB1YPR184W YER152CP10356 443 aa5.34□□□□□ -1.56
GDB1YPR184W RED1P14291 827 aa5.34□□□□□ -1.56
GDB1YPR184W RPS7AP26786 190 aaKnown RBP5.34□□□□□ -1.56
GDB1YPR184W EUG1P32474 517 aa5.34□□□□□ -1.56
GDB1YPR184W SSE2P32590 693 aaKnown RBP5.34□□□□□ -1.56
GDB1YPR184W RGT1P32862 1170 aa5.34□□□□□ -1.56
GDB1YPR184W SPP381P38282 291 aaPredicted RBP5.34□□□□□ -1.56
GDB1YPR184W RSM7P47150 247 aa5.34□□□□□ -1.56
GDB1YPR184W PRP31P49704 494 aaPredicted RBP5.34□□□□□ -1.56
GDB1YPR184W UTP4Q06679 776 aaKnown RBP5.34□□□□□ -1.56
GDB1YPR184W WRS1Q12109 432 aaKnown RBP5.34□□□□□ -1.56
GDB1YPR184W REC8Q12188 680 aa5.34□□□□□ -1.56
GDB1YPR184W PRT1P06103 763 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W FBP26P32604 452 aa5.33□□□□□ -1.56
GDB1YPR184W SHU2P38957 223 aa5.33□□□□□ -1.56
GDB1YPR184W TFC6Q06339 672 aa5.33□□□□□ -1.56
GDB1YPR184W PGA3Q12746 312 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W GCD1P09032 578 aaPredicted RBP5.33□□□□□ -1.56
GDB1YPR184W MIH1P23748 554 aa5.33□□□□□ -1.56
GDB1YPR184W BMH1P29311 267 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W GRS1P38088 690 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W DSL1P53847 754 aa5.33□□□□□ -1.56
GDB1YPR184W TIM8P57744 87 aa5.33□□□□□ -1.56
GDB1YPR184W PHM6Q05637 104 aa5.33□□□□□ -1.56
GDB1YPR184W EFG1Q3E705 233 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W CMD1P06787 147 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W CLN3P13365 580 aa5.33□□□□□ -1.56
GDB1YPR184W COX13P32799 129 aa5.33□□□□□ -1.56
GDB1YPR184W LDB17Q12342 491 aa5.33□□□□□ -1.56
GDB1YPR184W KIN1P13185 1064 aa5.33□□□□□ -1.56
GDB1YPR184W SRM1P21827 482 aa5.33□□□□□ -1.56
GDB1YPR184W BRF1P29056 596 aa5.33□□□□□ -1.56
GDB1YPR184W NNF2P53253 936 aa5.33□□□□□ -1.56
GDB1YPR184W RLI1Q03195 608 aaKnown RBP5.33□□□□□ -1.56
GDB1YPR184W TRS33Q99394 268 aa5.33□□□□□ -1.56
GDB1YPR184W FKS3Q04952 1785 aa5.32□□□□□ -1.56
GDB1YPR184W NAT1P12945 854 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W PFK1P16861 987 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W BST1P43571 1029 aa5.32□□□□□ -1.56
GDB1YPR184W HSH155P49955 971 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W FMS1P50264 508 aa5.32□□□□□ -1.56
GDB1YPR184W GNT1Q12096 491 aa5.32□□□□□ -1.56
GDB1YPR184W RIO1Q12196 484 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W HIS1P00498 297 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W PDC1P06169 563 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W SAH1P39954 449 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W YER130CP39959 443 aa5.32□□□□□ -1.56
GDB1YPR184W MAL11P53048 616 aa5.32□□□□□ -1.56
GDB1YPR184W ERG7P38604 731 aa5.32□□□□□ -1.56
GDB1YPR184W KIC1P38692 1080 aa5.32□□□□□ -1.56
GDB1YPR184W ARB1P40024 610 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W HXT8P40886 569 aa5.32□□□□□ -1.56
GDB1YPR184W NET1P47035 1189 aa5.32□□□□□ -1.56
GDB1YPR184W ALG11P53954 548 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W YML037CQ03703 340 aa5.32□□□□□ -1.56
GDB1YPR184W YMR018WQ04364 514 aa5.32□□□□□ -1.56
GDB1YPR184W GAD1Q04792 585 aa5.32□□□□□ -1.56
GDB1YPR184W TUM1Q08686 304 aaKnown RBP5.32□□□□□ -1.56
GDB1YPR184W ADF1Q2V2Q1 113 aa5.32□□□□□ -1.56
GDB1YPR184W NMT1P14743 455 aa5.32□□□□□ -1.56
GDB1YPR184W COQ8P27697 501 aa5.32□□□□□ -1.56
GDB1YPR184W CBR1P38626 284 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms