RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	YJL055W	P47044	245 aa		4.06	□□□□□ -1.76
APL4	YPR029C	AIM14	P53109	570 aa		4.06	□□□□□ -1.76
APL4	YPR029C	YNL115C	P53925	644 aa		4.06	□□□□□ -1.76
APL4	YPR029C	REX2	P54964	269 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	BSC2	Q05611	235 aa		4.06	□□□□□ -1.76
APL4	YPR029C	PHO92	Q06390	306 aa		4.06	□□□□□ -1.76
APL4	YPR029C	YTM1	Q12024	460 aa	Predicted RBP	4.06	□□□□□ -1.76
APL4	YPR029C	NFI1	Q12216	726 aa		4.06	□□□□□ -1.76
APL4	YPR029C	GLE1	Q12315	538 aa		4.06	□□□□□ -1.76
APL4	YPR029C	RMP1	Q12530	201 aa		4.06	□□□□□ -1.76
APL4	YPR029C	CTT1	P06115	562 aa		4.05	□□□□□ -1.76
APL4	YPR029C	TEC1	P18412	486 aa		4.05	□□□□□ -1.76
APL4	YPR029C	CLN1	P20437	546 aa		4.05	□□□□□ -1.76
APL4	YPR029C	SEC21	P32074	935 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	NIP1	P32497	812 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
APL4	YPR029C	SAP190	P36123	1033 aa		4.05	□□□□□ -1.76
APL4	YPR029C	VBA5	P36172	582 aa		4.05	□□□□□ -1.76
APL4	YPR029C	YJL070C	P40361	888 aa		4.05	□□□□□ -1.76
APL4	YPR029C	YJL068C	P40363	299 aa		4.05	□□□□□ -1.76
APL4	YPR029C	VHR1	P40522	640 aa		4.05	□□□□□ -1.76
APL4	YPR029C	CIR1	P42940	261 aa		4.05	□□□□□ -1.76
APL4	YPR029C	EEB1	Q02891	456 aa		4.05	□□□□□ -1.76
APL4	YPR029C	FCP1	Q03254	732 aa		4.05	□□□□□ -1.76
APL4	YPR029C	DAL7	P21826	554 aa		4.05	□□□□□ -1.76
APL4	YPR029C	MKK2	P32491	506 aa		4.05	□□□□□ -1.76
APL4	YPR029C	PRP19	P32523	503 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
APL4	YPR029C	VPS17	P32913	551 aa		4.05	□□□□□ -1.76
APL4	YPR029C	PRP40	P33203	583 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	YEL1	P34225	687 aa		4.05	□□□□□ -1.76
APL4	YPR029C	SWH1	P35845	1188 aa		4.05	□□□□□ -1.76
APL4	YPR029C	SBE2	P42223	864 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	CIT3	P43635	486 aa		4.05	□□□□□ -1.76
APL4	YPR029C	AIP1	P46680	615 aa	Known RBP	4.05	□□□□□ -1.76
APL4	YPR029C	APL6	P46682	809 aa		4.05	□□□□□ -1.76
APL4	YPR029C	VTC4	P47075	721 aa		4.05	□□□□□ -1.76
APL4	YPR029C	PCL10	P53124	433 aa		4.05	□□□□□ -1.76
APL4	YPR029C	UTP22	P53254	1237 aa	Predicted RBP	4.05	□□□□□ -1.76
APL4	YPR029C	TBF1	Q02457	562 aa		4.05	□□□□□ -1.76
APL4	YPR029C	YPL109C	Q02981	657 aa		4.05	□□□□□ -1.76
APL4	YPR029C	YCS4	Q06156	1176 aa		4.05	□□□□□ -1.76
APL4	YPR029C	RGA2	Q06407	1009 aa		4.05	□□□□□ -1.76
APL4	YPR029C	TFB4	Q12004	338 aa		4.05	□□□□□ -1.76
APL4	YPR029C	SEM1	O94742	89 aa		4.04	□□□□□ -1.76
APL4	YPR029C	GCR1	P07261	785 aa		4.04	□□□□□ -1.76
APL4	YPR029C	HMG1	P12683	1054 aa		4.04	□□□□□ -1.76
APL4	YPR029C	POL3	P15436	1097 aa		4.04	□□□□□ -1.76
APL4	YPR029C	MET8	P15807	274 aa		4.04	□□□□□ -1.76
APL4	YPR029C	MRPL32	P25348	183 aa		4.04	□□□□□ -1.76
APL4	YPR029C	PUP2	P32379	260 aa		4.04	□□□□□ -1.76
APL4	YPR029C	MRP4	P32902	394 aa		4.04	□□□□□ -1.76
APL4	YPR029C	SMC1	P32908	1225 aa		4.04	□□□□□ -1.76
APL4	YPR029C	TEF4	P36008	412 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	DED81	P38707	554 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	ALD5	P40047	520 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	UBP7	P40453	1071 aa		4.04	□□□□□ -1.76
APL4	YPR029C	TCB2	P48231	1178 aa		4.04	□□□□□ -1.76
APL4	YPR029C	TRF5	P48561	642 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	PSP2	P50109	593 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	KRE33	P53914	1056 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	ARP5	P53946	755 aa		4.04	□□□□□ -1.76
APL4	YPR029C	UTP21	Q06078	939 aa	Predicted RBP	4.04	□□□□□ -1.76
APL4	YPR029C	TSR1	Q07381	788 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	PAR32	Q12515	295 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	SSK22	P25390	1331 aa	Predicted RBP	4.04	□□□□□ -1.76
APL4	YPR029C	PUT4	P15380	627 aa		4.04	□□□□□ -1.76
APL4	YPR029C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
APL4	YPR029C	VBA3	P25594	458 aa		4.04	□□□□□ -1.76
APL4	YPR029C	MSH1	P25846	959 aa		4.04	□□□□□ -1.76
APL4	YPR029C	NGR1	P32831	672 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	LOT5	P34234	306 aa		4.04	□□□□□ -1.76
APL4	YPR029C	ARL1	P38116	183 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	PIH1	P38768	344 aa		4.04	□□□□□ -1.76
APL4	YPR029C	STL1	P39932	569 aa		4.04	□□□□□ -1.76
APL4	YPR029C	YIL161W	P40449	235 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	SKP2	P42843	763 aa		4.04	□□□□□ -1.76
APL4	YPR029C	YJR096W	P47137	282 aa		4.04	□□□□□ -1.76
APL4	YPR029C	SHE4	P51534	789 aa		4.04	□□□□□ -1.76
APL4	YPR029C	SUT1	P53032	299 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	LSB1	P53281	241 aa		4.04	□□□□□ -1.76
APL4	YPR029C	LSC1	P53598	329 aa	Known RBP	4.04	□□□□□ -1.76
APL4	YPR029C	YOR352W	Q08816	343 aa		4.04	□□□□□ -1.76
APL4	YPR029C	SUP35	P05453	685 aa	Known RBP	4.03	□□□□□ -1.76
APL4	YPR029C	HEM12	P32347	362 aa	Predicted RBP	4.03	□□□□□ -1.76
APL4	YPR029C	SLC1	P33333	303 aa		4.03	□□□□□ -1.76
APL4	YPR029C	BIT2	P38346	545 aa		4.03	□□□□□ -1.76
APL4	YPR029C	MTG2	P38860	518 aa		4.03	□□□□□ -1.76
APL4	YPR029C	OAF1	P39720	1047 aa	Predicted RBP	4.03	□□□□□ -1.76
APL4	YPR029C	YEL068C	P39977	110 aa		4.03	□□□□□ -1.76
APL4	YPR029C	BUD16	P39988	312 aa		4.03	□□□□□ -1.76
APL4	YPR029C	SDS3	P40505	327 aa		4.03	□□□□□ -1.76
APL4	YPR029C	NEO1	P40527	1151 aa		4.03	□□□□□ -1.76
APL4	YPR029C	ARF3	P40994	183 aa	RIP-Chip data	4.03	□□□□□ -1.76	not detected
APL4	YPR029C	GZF3	P42944	551 aa	Known RBP	4.03	□□□□□ -1.76
APL4	YPR029C	YGL140C	P53120	1219 aa		4.03	□□□□□ -1.76
APL4	YPR029C	MET13	P53128	600 aa		4.03	□□□□□ -1.76
APL4	YPR029C	SLD3	P53135	668 aa		4.03	□□□□□ -1.76
APL4	YPR029C	CNM67	P53865	581 aa	Known RBP	4.03	□□□□□ -1.76
APL4	YPR029C	TIM10	P87108	93 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms