RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI1	YPL016W	CTF4	Q01454	927 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	OSH6	Q02201	448 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	NGL3	Q03210	505 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	PGA3	Q12746	312 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	POL3	P15436	1097 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	PRP4	P20053	465 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	RPO26	P20435	155 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	APL1	P27351	700 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	DIP5	P53388	608 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	SQS1	P53866	767 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SWI1	YPL016W	YPR089W	O13585	888 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	CLN3	P13365	580 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	CLB4	P24871	460 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	RPC53	P25441	422 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	MET4	P32389	672 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	AFG2	P32794	780 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	YHR020W	P38708	688 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	EFM4	P40516	257 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	ELA1	P53861	379 aa	Predicted RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	RMD1	Q03441	430 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	YMR111C	Q04461	462 aa	Predicted RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	OMS1	Q06668	471 aa		3.99	□□□□□ -1.77
SWI1	YPL016W	BRE1	Q07457	700 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	MAK21	Q12176	1025 aa	Known RBP	3.99	□□□□□ -1.77
SWI1	YPL016W	GLY1	P37303	387 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	YMR124W	P39523	943 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	RTR1	P40084	226 aa	Predicted RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	INA22	P40576	216 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	PNG1	Q02890	363 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	DIG1	Q03063	452 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	VPS64	Q03944	604 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	TMA64	Q04600	565 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	SPP382	Q06411	708 aa	Predicted RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	YOL057W	Q08225	711 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	BRR1	Q99177	341 aa	Predicted RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	RAD24	P32641	659 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	XRS2	P33301	854 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	MIF2	P35201	549 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	HAL5	P38970	855 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	ZRG8	P40021	1076 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	QDR2	P40474	542 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	GVP36	P40531	326 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	GCN20	P43535	752 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	GNP1	P48813	663 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	UBP15	P50101	1230 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	ERP6	P53198	216 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	UFO1	Q04511	668 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	NOC3	Q07896	663 aa	Predicted RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	ALR1	Q08269	859 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	SGT2	Q12118	346 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	SMC6	Q12749	1114 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	LPD1	P09624	499 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	MVD1	P32377	396 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	BNI5	P53890	448 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	RPM2	Q02773	1202 aa		3.98	□□□□□ -1.77
SWI1	YPL016W	RNY1	Q02933	434 aa	Known RBP	3.98	□□□□□ -1.77
SWI1	YPL016W	ARG81	P05085	880 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	PET494	P07390	489 aa	Predicted RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	YBR242W	P38331	238 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	RIC1	P40395	1056 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	MET18	P40469	1032 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	YIL001W	P40560	513 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	STB2	P46679	850 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	APT1	P49435	187 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	CUE3	P53137	624 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	TMA46	Q12000	345 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	RUD3	Q12234	484 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	CAP1	P28495	268 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	YHL012W	P38709	493 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	YER034W	P40022	185 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	LSC2	P53312	427 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	COP1	P53622	1201 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	DLT1	Q04216	342 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	GLO2	Q05584	274 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	PIG1	Q06216	648 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	POM152	P39685	1337 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	PGK1	P00560	416 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	GLN4	P13188	809 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	MEF1	P25039	761 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	AST1	P35183	429 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	YGR153W	P48238	217 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	ZPR1	P53303	486 aa	Known RBP	3.97	□□□□□ -1.77
SWI1	YPL016W	ORC3	P54790	616 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	YCS4	Q06156	1176 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	SGO1	Q08490	590 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	HMI1	Q12039	706 aa		3.97	□□□□□ -1.77
SWI1	YPL016W	SUI3	P09064	285 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	MSM1	P22438	575 aa		3.96	□□□□□ -1.78
SWI1	YPL016W	POL4	P25615	582 aa		3.96	□□□□□ -1.78
SWI1	YPL016W	BUD23	P25627	275 aa	Predicted RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	BMH1	P29311	267 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	SSE1	P32589	693 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	RPT1	P33299	467 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	YHR131C	P38835	850 aa		3.96	□□□□□ -1.78
SWI1	YPL016W	YHB1	P39676	399 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	KAP123	P40069	1113 aa	Known RBP	3.96	□□□□□ -1.78
SWI1	YPL016W	YJL181W	P46987	611 aa		3.96	□□□□□ -1.78
SWI1	YPL016W	YJL171C	P46992	396 aa		3.96	□□□□□ -1.78
SWI1	YPL016W	YLR257W	Q06146	321 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms