RNA–Protein interactions for RNA: YNL339C

YRF1-6, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-6, Length 5,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-6YNL339C RLP7P40693 322 aaKnown RBP8.41□□□□□ -1.06
YRF1-6YNL339C BCP1Q06338 283 aa8.41□□□□□ -1.06
YRF1-6YNL339C YOR059CQ08448 450 aaKnown RBP8.41□□□□□ -1.06
YRF1-6YNL339C VPS34P22543 875 aa8.41□□□□□ -1.06
YRF1-6YNL339C LIF1P53150 421 aa8.41□□□□□ -1.06
YRF1-6YNL339C SAC3P46674 1301 aa8.41□□□□□ -1.06
YRF1-6YNL339C YKR075CP36155 307 aa8.41□□□□□ -1.06
YRF1-6YNL339C VHR2P40041 505 aa8.41□□□□□ -1.06
YRF1-6YNL339C EPS1P40557 701 aa8.41□□□□□ -1.06
YRF1-6YNL339C NOG1Q02892 647 aaKnown RBP8.41□□□□□ -1.06
YRF1-6YNL339C SWI3P32591 825 aa8.41□□□□□ -1.06
YRF1-6YNL339C BUD2P33314 1104 aa8.41□□□□□ -1.06
YRF1-6YNL339C AIM21P40563 679 aa8.41□□□□□ -1.06
YRF1-6YNL339C HXT8P40886 569 aa8.41□□□□□ -1.06
YRF1-6YNL339C MNN11P46985 422 aaKnown RBP8.41□□□□□ -1.06
YRF1-6YNL339C RRP17Q04031 235 aaPredicted RBP8.41□□□□□ -1.06
YRF1-6YNL339C HFD1Q04458 532 aa8.41□□□□□ -1.06
YRF1-6YNL339C HIS2P38635 335 aa8.4□□□□□ -1.06
YRF1-6YNL339C YNL247WP53852 767 aaKnown RBP8.4□□□□□ -1.06
YRF1-6YNL339C EFM6P53970 246 aa8.4□□□□□ -1.06
YRF1-6YNL339C AAD15Q08361 143 aa8.4□□□□□ -1.06
YRF1-6YNL339C MUD1P32605 298 aaKnown RBP8.4□□□□□ -1.06
YRF1-6YNL339C CSE1P33307 960 aa8.4□□□□□ -1.06
YRF1-6YNL339C THI20Q08224 551 aa8.4□□□□□ -1.06
YRF1-6YNL339C ATP4P05626 244 aa8.4□□□□□ -1.06
YRF1-6YNL339C PCK1P10963 549 aa8.4□□□□□ -1.06
YRF1-6YNL339C AEP2P22136 580 aa8.4□□□□□ -1.06
YRF1-6YNL339C ALF1P53904 254 aa8.4□□□□□ -1.06
YRF1-6YNL339C GTB1Q04924 702 aa8.4□□□□□ -1.06
YRF1-6YNL339C YLR257WQ06146 321 aaKnown RBP8.4□□□□□ -1.06
YRF1-6YNL339C MRS2Q01926 470 aa8.4□□□□□ -1.07
YRF1-6YNL339C SPO19Q03029 223 aa8.4□□□□□ -1.07
YRF1-6YNL339C RAD53P22216 821 aa8.4□□□□□ -1.07
YRF1-6YNL339C SHE10P53075 577 aa8.4□□□□□ -1.07
YRF1-6YNL339C BRR1Q99177 341 aaPredicted RBP8.4□□□□□ -1.07
YRF1-6YNL339C PCH2P38126 564 aa8.39□□□□□ -1.07
YRF1-6YNL339C FTR1P40088 404 aa8.39□□□□□ -1.07
YRF1-6YNL339C YLR297WQ05899 129 aa8.39□□□□□ -1.07
YRF1-6YNL339C YJL070CP40361 888 aa8.39□□□□□ -1.07
YRF1-6YNL339C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
YRF1-6YNL339C PPM2Q08282 695 aa8.39□□□□□ -1.07
YRF1-6YNL339C MET7Q08645 548 aa8.39□□□□□ -1.07
YRF1-6YNL339C APL4Q12028 832 aa8.39□□□□□ -1.07
YRF1-6YNL339C MCM16Q12262 181 aa8.39□□□□□ -1.07
YRF1-6YNL339C RPB4P20433 221 aaPredicted RBP8.39□□□□□ -1.07
YRF1-6YNL339C ZIP2P53061 704 aa8.39□□□□□ -1.07
YRF1-6YNL339C KAP114P53067 1004 aa8.39□□□□□ -1.07
YRF1-6YNL339C URH1Q04179 340 aa8.39□□□□□ -1.07
YRF1-6YNL339C DPL1Q05567 589 aa8.39□□□□□ -1.07
YRF1-6YNL339C MSH1P25846 959 aa8.39□□□□□ -1.07
YRF1-6YNL339C PET100P38958 111 aa8.39□□□□□ -1.07
YRF1-6YNL339C TEL2P53038 688 aa8.39□□□□□ -1.07
YRF1-6YNL339C LGE1Q02796 332 aaKnown RBP8.39□□□□□ -1.07
YRF1-6YNL339C SOV1Q04748 898 aa8.39□□□□□ -1.07
YRF1-6YNL339C CMD1P06787 147 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C TCP1P12612 559 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C CDC3P32457 520 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C RAD5P32849 1169 aaPredicted RBP8.38□□□□□ -1.07
YRF1-6YNL339C MRS6P32864 603 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C DAS1P47005 663 aa8.38□□□□□ -1.07
YRF1-6YNL339C IVY1Q04934 453 aa8.38□□□□□ -1.07
YRF1-6YNL339C YMR226CQ05016 267 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C HMI1Q12039 706 aa8.38□□□□□ -1.07
YRF1-6YNL339C SPO12P17123 173 aa8.38□□□□□ -1.07
YRF1-6YNL339C CNN1P43618 361 aa8.38□□□□□ -1.07
YRF1-6YNL339C CIT3P43635 486 aa8.38□□□□□ -1.07
YRF1-6YNL339C LSG1P53145 640 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C YPR097WQ06839 1073 aa8.38□□□□□ -1.07
YRF1-6YNL339C SPE3Q12074 293 aaKnown RBP8.38□□□□□ -1.07
YRF1-6YNL339C KNS1P32350 737 aaPredicted RBP8.38□□□□□ -1.07
YRF1-6YNL339C LIN1P38852 340 aaPredicted RBP8.38□□□□□ -1.07
YRF1-6YNL339C FRT2P39734 528 aa8.38□□□□□ -1.07
YRF1-6YNL339C SSL2Q00578 843 aa8.38□□□□□ -1.07
YRF1-6YNL339C TRM2P33753 639 aa8.38□□□□□ -1.07
YRF1-6YNL339C YKL100CP34248 587 aa8.38□□□□□ -1.07
YRF1-6YNL339C APM2P38700 605 aa8.37□□□□□ -1.07
YRF1-6YNL339C RPA49Q01080 415 aaPredicted RBP8.37□□□□□ -1.07
YRF1-6YNL339C PER1P25625 357 aa8.37□□□□□ -1.07
YRF1-6YNL339C GLN1P32288 370 aaKnown RBP8.37□□□□□ -1.07
YRF1-6YNL339C RFT1P38206 574 aaPredicted RBP8.37□□□□□ -1.07
YRF1-6YNL339C EMW1P42842 904 aaKnown RBP8.37□□□□□ -1.07
YRF1-6YNL339C CUL3P53202 744 aa8.37□□□□□ -1.07
YRF1-6YNL339C GUA1P38625 525 aaKnown RBP8.37□□□□□ -1.07
YRF1-6YNL339C DSE3Q08729 430 aa8.37□□□□□ -1.07
YRF1-6YNL339C RPS6AP0CX37 236 aaKnown RBP8.37□□□□□ -1.07
YRF1-6YNL339C RPS6BP0CX38 236 aaPredicted RBP8.37□□□□□ -1.07
YRF1-6YNL339C SHC1P39000 512 aa8.37□□□□□ -1.07
YRF1-6YNL339C TMA16Q08687 178 aa8.37□□□□□ -1.07
YRF1-6YNL339C HOS1Q12214 470 aa8.37□□□□□ -1.07
YRF1-6YNL339C MAM3Q12296 706 aa8.37□□□□□ -1.07
YRF1-6YNL339C SSE2P32590 693 aaKnown RBP8.36□□□□□ -1.07
YRF1-6YNL339C UBP6P43593 499 aaKnown RBP8.36□□□□□ -1.07
YRF1-6YNL339C FAR3P46671 204 aa8.36□□□□□ -1.07
YRF1-6YNL339C FUS2Q05670 677 aa8.36□□□□□ -1.07
YRF1-6YNL339C ESC8Q08119 714 aa8.36□□□□□ -1.07
YRF1-6YNL339C SBP1P10080 294 aaKnown RBP8.36□□□□□ -1.07
YRF1-6YNL339C SRB7P47822 140 aa8.36□□□□□ -1.07
YRF1-6YNL339C ERG5P54781 538 aa8.36□□□□□ -1.07
YRF1-6YNL339C IWR1Q07532 353 aaPredicted RBP8.36□□□□□ -1.07
YRF1-6YNL339C YER152CP10356 443 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms