RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W REG2P38232 338 aa6.85□□□□□ -1.31
CAF40YNL288W QDR2P40474 542 aa6.85□□□□□ -1.31
CAF40YNL288W CIT3P43635 486 aa6.85□□□□□ -1.31
CAF40YNL288W HUL5P53119 910 aa6.85□□□□□ -1.31
CAF40YNL288W RTC4P53850 401 aa6.85□□□□□ -1.31
CAF40YNL288W CNM67P53865 581 aaKnown RBP6.85□□□□□ -1.31
CAF40YNL288W RPL34AP87262 121 aaPredicted RBP6.85□□□□□ -1.31
CAF40YNL288W HRQ1Q05549 1077 aa6.85□□□□□ -1.31
CAF40YNL288W OXR1Q08952 273 aa6.85□□□□□ -1.31
CAF40YNL288W ARP6Q12509 438 aa6.85□□□□□ -1.31
CAF40YNL288W AI1P03875 834 aa6.84□□□□□ -1.31
CAF40YNL288W ISC10P32645 267 aa6.84□□□□□ -1.31
CAF40YNL288W DBP7P36120 742 aaKnown RBP6.84□□□□□ -1.31
CAF40YNL288W ISW1P38144 1129 aa6.84□□□□□ -1.31
CAF40YNL288W STT3P39007 718 aaKnown RBP6.84□□□□□ -1.31
CAF40YNL288W GAA1P39012 614 aa6.84□□□□□ -1.31
CAF40YNL288W HMF1P40037 129 aaKnown RBP6.84□□□□□ -1.31
CAF40YNL288W HST1P53685 503 aa6.84□□□□□ -1.31
CAF40YNL288W ORC4P54791 529 aa6.84□□□□□ -1.31
CAF40YNL288W ULP1Q02724 621 aa6.84□□□□□ -1.31
CAF40YNL288W AIM33Q04516 312 aa6.84□□□□□ -1.31
CAF40YNL288W PNP1Q05788 311 aa6.84□□□□□ -1.31
CAF40YNL288W WHI4Q07655 649 aaKnown RBP6.84□□□□□ -1.31
CAF40YNL288W SLK19Q08581 821 aaKnown RBP6.84□□□□□ -1.31
CAF40YNL288W YOR296WQ08748 1289 aa6.84□□□□□ -1.31
CAF40YNL288W TRM11Q12463 433 aa6.84□□□□□ -1.31
CAF40YNL288W PGK1P00560 416 aaKnown RBP6.83□□□□□ -1.32
CAF40YNL288W HXK1P04806 485 aaKnown RBP6.83□□□□□ -1.32
CAF40YNL288W GSY1P23337 708 aa6.83□□□□□ -1.32
CAF40YNL288W YUR1P26725 428 aa6.83□□□□□ -1.32
CAF40YNL288W VPS24P36095 224 aaKnown RBP6.83□□□□□ -1.32
CAF40YNL288W BDH2P39713 417 aa6.83□□□□□ -1.32
CAF40YNL288W AIM21P40563 679 aa6.83□□□□□ -1.32
CAF40YNL288W HYR1P40581 163 aaKnown RBP6.83□□□□□ -1.32
CAF40YNL288W SKP1P52286 194 aa6.83□□□□□ -1.32
CAF40YNL288W VPS62P53285 467 aa6.83□□□□□ -1.32
CAF40YNL288W CUS1Q02554 436 aaPredicted RBP6.83□□□□□ -1.32
CAF40YNL288W TRS120Q04183 1289 aa6.83□□□□□ -1.32
CAF40YNL288W YMR321CQ04898 105 aa6.83□□□□□ -1.32
CAF40YNL288W PHM6Q05637 104 aa6.83□□□□□ -1.32
CAF40YNL288W YOR131CQ12486 218 aa6.83□□□□□ -1.32
CAF40YNL288W ILV1P00927 576 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W POX1P13711 748 aa6.82□□□□□ -1.32
CAF40YNL288W MCM3P24279 971 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W VMA3P25515 160 aa6.82□□□□□ -1.32
CAF40YNL288W RDS1P25611 832 aa6.82□□□□□ -1.32
CAF40YNL288W RRN6P32786 894 aa6.82□□□□□ -1.32
CAF40YNL288W PGM1P33401 570 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W GPT2P36148 743 aa6.82□□□□□ -1.32
CAF40YNL288W NCL1P38205 684 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W DYS1P38791 387 aa6.82□□□□□ -1.32
CAF40YNL288W YJR107WP47145 328 aa6.82□□□□□ -1.32
CAF40YNL288W YGR153WP48238 217 aa6.82□□□□□ -1.32
CAF40YNL288W ZPR1P53303 486 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W HEH2Q03281 663 aa6.82□□□□□ -1.32
CAF40YNL288W TY1A-DR2Q03964 440 aaKnown RBP6.82□□□□□ -1.32
CAF40YNL288W SUT2Q12286 268 aa6.82□□□□□ -1.32
CAF40YNL288W GPM1P00950 247 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W LDH1P38139 375 aa6.81□□□□□ -1.32
CAF40YNL288W RFT1P38206 574 aaPredicted RBP6.81□□□□□ -1.32
CAF40YNL288W KSP1P38691 1029 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W GPD2P41911 440 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W CTR1P49573 406 aa6.81□□□□□ -1.32
CAF40YNL288W YGL081WP53156 320 aa6.81□□□□□ -1.32
CAF40YNL288W YGL039WP53183 348 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W BRE5P53741 515 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W YLH47Q06493 454 aa6.81□□□□□ -1.32
CAF40YNL288W PEX19Q07418 342 aa6.81□□□□□ -1.32
CAF40YNL288W THI72Q08579 599 aa6.81□□□□□ -1.32
CAF40YNL288W MDM20Q12387 796 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W PTC5Q12511 572 aa6.81□□□□□ -1.32
CAF40YNL288W FKS1P38631 1876 aaKnown RBP6.81□□□□□ -1.32
CAF40YNL288W SNA3P14359 133 aa6.8□□□□□ -1.32
CAF40YNL288W URA1P28272 314 aaPredicted RBP6.8□□□□□ -1.32
CAF40YNL288W BCS1P32839 456 aa6.8□□□□□ -1.32
CAF40YNL288W TVP38P36164 337 aa6.8□□□□□ -1.32
CAF40YNL288W MSC7P38694 644 aa6.8□□□□□ -1.32
CAF40YNL288W APM2P38700 605 aa6.8□□□□□ -1.32
CAF40YNL288W NOC2P39744 710 aaKnown RBP6.8□□□□□ -1.32
CAF40YNL288W DAK2P43550 591 aa6.8□□□□□ -1.32
CAF40YNL288W CUE3P53137 624 aaKnown RBP6.8□□□□□ -1.32
CAF40YNL288W MDR1P53258 950 aa6.8□□□□□ -1.32
CAF40YNL288W SDA1P53313 767 aaKnown RBP6.8□□□□□ -1.32
CAF40YNL288W YML020WQ03722 664 aa6.8□□□□□ -1.32
CAF40YNL288W EIS1Q05050 843 aaKnown RBP6.8□□□□□ -1.32
CAF40YNL288W FUS2Q05670 677 aa6.8□□□□□ -1.32
CAF40YNL288W MMR1Q06324 491 aa6.8□□□□□ -1.32
CAF40YNL288W CRD1Q07560 283 aa6.8□□□□□ -1.32
CAF40YNL288W YLL058WQ12198 575 aa6.8□□□□□ -1.32
CAF40YNL288W SMC6Q12749 1114 aa6.8□□□□□ -1.32
CAF40YNL288W TUF1P02992 437 aaKnown RBP6.79□□□□□ -1.32
CAF40YNL288W CKA2P19454 339 aa6.79□□□□□ -1.32
CAF40YNL288W UBP11P36026 717 aa6.79□□□□□ -1.32
CAF40YNL288W SVF1Q05515 481 aa6.79□□□□□ -1.32
CAF40YNL288W HIS4P00815 799 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W FUR4P05316 633 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W RPL22AP05749 121 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W SRD1P09007 221 aa6.78□□□□□ -1.32
CAF40YNL288W CLN3P13365 580 aa6.78□□□□□ -1.32
CAF40YNL288W MBR1P23493 339 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 140.4 ms