RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	PET10	P36139	283 aa		4.31	□□□□□ -1.72
SWS2	YNL081C	YIL108W	P40483	696 aa	Known RBP	4.31	□□□□□ -1.72
SWS2	YNL081C	BUL2	Q03758	920 aa	Known RBP	4.31	□□□□□ -1.72
SWS2	YNL081C	RPS9A	O13516	197 aa	Known RBP	4.3	□□□□□ -1.72
SWS2	YNL081C	MPH2	P0CD99	609 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	CAD1	P24813	409 aa	Known RBP	4.3	□□□□□ -1.72
SWS2	YNL081C	KAR4	P25583	335 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	AIM21	P40563	679 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	CEP3	P40969	608 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	RIP-Chip
SWS2	YNL081C	YKR011C	Q02209	353 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	FLC1	Q08967	793 aa		4.3	□□□□□ -1.72
SWS2	YNL081C	SDP1	P40479	209 aa		4.29	□□□□□ -1.72
SWS2	YNL081C	UBP6	P43593	499 aa	Known RBP	4.29	□□□□□ -1.72
SWS2	YNL081C	NOG2	P53742	486 aa	Known RBP	4.29	□□□□□ -1.72
SWS2	YNL081C	SSL1	Q04673	461 aa	Predicted RBP	4.29	□□□□□ -1.72
SWS2	YNL081C	FBP1	P09201	348 aa		4.28	□□□□□ -1.72
SWS2	YNL081C	MSD1	P15179	658 aa	Known RBP	4.28	□□□□□ -1.72
SWS2	YNL081C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SWS2	YNL081C	HUL5	P53119	910 aa		4.28	□□□□□ -1.72
SWS2	YNL081C	PUS2	P53167	370 aa		4.28	□□□□□ -1.72
SWS2	YNL081C	DAM1	P53267	343 aa		4.28	□□□□□ -1.72
SWS2	YNL081C	SUN4	P53616	420 aa		4.28	□□□□□ -1.72
SWS2	YNL081C	TOM70	P07213	617 aa	Known RBP	4.27	□□□□□ -1.73
SWS2	YNL081C	URA1	P28272	314 aa	Predicted RBP	4.27	□□□□□ -1.73
SWS2	YNL081C	HRR25	P29295	494 aa	Known RBP	4.27	□□□□□ -1.73
SWS2	YNL081C	RPD3	P32561	433 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	STE14	P32584	239 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	MSS4	P38994	779 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	HDA1	P53973	706 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	CTF4	Q01454	927 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	TAF8	Q03750	510 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	PEX19	Q07418	342 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	SWM1	Q12379	170 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	YOR131C	Q12486	218 aa		4.27	□□□□□ -1.73
SWS2	YNL081C	GAL11	P19659	1081 aa		4.26	□□□□□ -1.73
SWS2	YNL081C	CYS3	P31373	394 aa	Known RBP	4.26	□□□□□ -1.73
SWS2	YNL081C	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
SWS2	YNL081C	KTR4	P38131	464 aa		4.26	□□□□□ -1.73
SWS2	YNL081C	CTF8	P38877	133 aa		4.26	□□□□□ -1.73
SWS2	YNL081C	RSP5	P39940	809 aa	Known RBP	4.26	□□□□□ -1.73
SWS2	YNL081C	ENV7	Q12003	364 aa		4.26	□□□□□ -1.73
SWS2	YNL081C	CDC53	Q12018	815 aa	Known RBP	4.26	□□□□□ -1.73
SWS2	YNL081C	TRP4	P07285	380 aa	Predicted RBP	4.25	□□□□□ -1.73
SWS2	YNL081C	TOP3	P13099	656 aa		4.25	□□□□□ -1.73
SWS2	YNL081C	YHR020W	P38708	688 aa	Known RBP	4.25	□□□□□ -1.73
SWS2	YNL081C	CHZ1	P40019	153 aa	Predicted RBP	4.25	□□□□□ -1.73
SWS2	YNL081C	NSE3	Q05541	303 aa		4.25	□□□□□ -1.73
SWS2	YNL081C	BDF2	Q07442	638 aa		4.25	□□□□□ -1.73
SWS2	YNL081C	CAN1	P04817	590 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	NGG1	P32494	702 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	EMC3	P36039	253 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	YHR078W	P38799	552 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	ALG2	P43636	503 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	KIN4	Q01919	800 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	YDR514C	Q04408	483 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	REH1	Q06709	432 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	TRM11	Q12463	433 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	YOL098C	Q12496	1037 aa		4.24	□□□□□ -1.73
SWS2	YNL081C	DAL7	P21826	554 aa		4.23	□□□□□ -1.73
SWS2	YNL081C	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
SWS2	YNL081C	SRP40	P32583	406 aa	Predicted RBP	4.23	□□□□□ -1.73
SWS2	YNL081C	SUL1	P38359	859 aa		4.23	□□□□□ -1.73
SWS2	YNL081C	YGR283C	P53336	341 aa	Predicted RBP	4.23	□□□□□ -1.73
SWS2	YNL081C	LAS17	Q12446	633 aa		4.23	□□□□□ -1.73
SWS2	YNL081C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWS2	YNL081C	SEC21	P32074	935 aa	Known RBP	4.22	□□□□□ -1.73
SWS2	YNL081C	CTF13	P35203	478 aa		4.22	□□□□□ -1.73
SWS2	YNL081C	SAP190	P36123	1033 aa		4.22	□□□□□ -1.73
SWS2	YNL081C	PZF1	P39933	429 aa		4.22	□□□□□ -1.73
SWS2	YNL081C	ZDS1	P50111	915 aa	Known RBP	4.22	□□□□□ -1.73
SWS2	YNL081C	PRC1	P00729	532 aa		4.21	□□□□□ -1.74
SWS2	YNL081C	BET3	P36149	193 aa		4.21	□□□□□ -1.74
SWS2	YNL081C	CHS7	P38843	316 aa		4.21	□□□□□ -1.74
SWS2	YNL081C	TAD1	P53065	400 aa		4.21	□□□□□ -1.74
SWS2	YNL081C	DUS1	P53759	423 aa	Known RBP	4.21	□□□□□ -1.74
SWS2	YNL081C	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
SWS2	YNL081C	MET3	P08536	511 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	SLI1	P53304	468 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	SLU7	Q02775	382 aa	Known RBP	4.2	□□□□□ -1.74
SWS2	YNL081C	ATP25	Q03153	612 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	PKH1	Q03407	766 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	DLT1	Q04216	342 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	RSC3	Q06639	885 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	YOL073C	Q08232	322 aa		4.2	□□□□□ -1.74
SWS2	YNL081C	RPP1	P38786	293 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	SET5	P38890	526 aa	Known RBP	4.19	□□□□□ -1.74
SWS2	YNL081C	VHR1	P40522	640 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	SHR5	P41912	237 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	SSY5	P47002	699 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	RTA1	P53047	317 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	ERG5	P54781	538 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	YLR040C	Q07988	224 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	MET7	Q08645	548 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	HAL9	Q12180	1030 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	YOR022C	Q12204	715 aa		4.19	□□□□□ -1.74
SWS2	YNL081C	ALG7	P07286	448 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	TUB3	P09734	445 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 122.7 ms