RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C PPS1P38148 807 aa12.42□□□□□ -0.42
LCB1YMR296C PIH1P38768 344 aa12.42□□□□□ -0.42
LCB1YMR296C ALD5P40047 520 aaKnown RBP12.42□□□□□ -0.42
LCB1YMR296C YNL115CP53925 644 aa12.42□□□□□ -0.42
LCB1YMR296C CUS1Q02554 436 aaPredicted RBP12.42□□□□□ -0.42
LCB1YMR296C COQ9Q05779 260 aa12.42□□□□□ -0.42
LCB1YMR296C EFT1P32324 842 aaKnown RBP12.41□□□□□ -0.42
LCB1YMR296C MCX1P38323 520 aaPredicted RBP12.41□□□□□ -0.42
LCB1YMR296C TOS3P43637 560 aa12.41□□□□□ -0.42
LCB1YMR296C GUP1P53154 560 aa12.41□□□□□ -0.42
LCB1YMR296C ROD1Q02805 837 aa12.41□□□□□ -0.42
LCB1YMR296C NEW1Q08972 1196 aaKnown RBP12.41□□□□□ -0.42
LCB1YMR296C RAD57P25301 460 aa12.4□□□□□ -0.42
LCB1YMR296C PDC6P26263 563 aaKnown RBP12.4□□□□□ -0.42
LCB1YMR296C DPB3P27344 201 aa12.4□□□□□ -0.42
LCB1YMR296C RAM2P29703 316 aa12.4□□□□□ -0.42
LCB1YMR296C MSS51P32335 436 aa12.4□□□□□ -0.42
LCB1YMR296C SIP3P38717 1229 aa12.4□□□□□ -0.42
LCB1YMR296C CIN4P39110 191 aa12.4□□□□□ -0.42
LCB1YMR296C BIM1P40013 344 aa12.4□□□□□ -0.42
LCB1YMR296C IES1P43579 692 aa12.4□□□□□ -0.42
LCB1YMR296C SMC5Q08204 1093 aa12.4□□□□□ -0.42
LCB1YMR296C HUL4P40985 892 aa12.39□□□□□ -0.43
LCB1YMR296C FOL2P51601 243 aaKnown RBP12.39□□□□□ -0.43
LCB1YMR296C UTP5Q04177 643 aaKnown RBP12.39□□□□□ -0.43
LCB1YMR296C VAC14Q06708 880 aa12.39□□□□□ -0.43
LCB1YMR296C NOP14Q99207 810 aaKnown RBP12.39□□□□□ -0.43
LCB1YMR296C RIF1P29539 1916 aa12.39□□□□□ -0.43
LCB1YMR296C TOM70P07213 617 aaKnown RBP12.38□□□□□ -0.43
LCB1YMR296C TCP1P12612 559 aaKnown RBP12.38□□□□□ -0.43
LCB1YMR296C UBP5P39944 805 aa12.38□□□□□ -0.43
LCB1YMR296C RPN3P40016 523 aaKnown RBP12.38□□□□□ -0.43
LCB1YMR296C YAP5P40574 245 aa12.38□□□□□ -0.43
LCB1YMR296C ACF4P47129 309 aa12.38□□□□□ -0.43
LCB1YMR296C YDL057WQ07379 328 aa12.38□□□□□ -0.43
LCB1YMR296C YLR001CQ07895 862 aa12.38□□□□□ -0.43
LCB1YMR296C TUP1P16649 713 aa12.38□□□□□ -0.43
LCB1YMR296C RPC53P25441 422 aa12.38□□□□□ -0.43
LCB1YMR296C GUA1P38625 525 aaKnown RBP12.38□□□□□ -0.43
LCB1YMR296C EAF5P39995 279 aa12.38□□□□□ -0.43
LCB1YMR296C NUP82P40368 713 aa12.38□□□□□ -0.43
LCB1YMR296C BRL1P38770 471 aa12.37□□□□□ -0.43
LCB1YMR296C TAD1P53065 400 aa12.37□□□□□ -0.43
LCB1YMR296C NCS2P53923 493 aaPredicted RBP12.37□□□□□ -0.43
LCB1YMR296C ARK1P53974 638 aa12.37□□□□□ -0.43
LCB1YMR296C EAR1Q03212 550 aa12.37□□□□□ -0.43
LCB1YMR296C YKL068W-AQ3E826 78 aa12.37□□□□□ -0.43
LCB1YMR296C PFK1P16861 987 aaKnown RBP12.36□□□□□ -0.43
LCB1YMR296C CAD1P24813 409 aaKnown RBP12.36□□□□□ -0.43
LCB1YMR296C PGM2P37012 569 aaKnown RBP12.36□□□□□ -0.43
LCB1YMR296C SMF1P38925 575 aa12.36□□□□□ -0.43
LCB1YMR296C BUD16P39988 312 aa12.36□□□□□ -0.43
LCB1YMR296C CCM1P48237 864 aaPredicted RBP12.36□□□□□ -0.43
LCB1YMR296C MAL13P53338 473 aa12.36□□□□□ -0.43
LCB1YMR296C NOC3Q07896 663 aaPredicted RBP12.36□□□□□ -0.43
LCB1YMR296C YPR117WQ06116 2489 aa12.36□□□□□ -0.43
LCB1YMR296C TRK2P28584 889 aa12.35□□□□□ -0.43
LCB1YMR296C ATG19P35193 415 aa12.35□□□□□ -0.43
LCB1YMR296C POA1P38218 177 aa12.35□□□□□ -0.43
LCB1YMR296C AVT1P47082 602 aa12.35□□□□□ -0.43
LCB1YMR296C NBP1P52919 319 aaPredicted RBP12.35□□□□□ -0.43
LCB1YMR296C NGL3Q03210 505 aa12.35□□□□□ -0.43
LCB1YMR296C SOV1Q04748 898 aa12.35□□□□□ -0.43
LCB1YMR296C TCO89Q08921 799 aa12.35□□□□□ -0.43
LCB1YMR296C SSB1P11484 613 aaKnown RBP12.35□□□□□ -0.43
LCB1YMR296C YEL043WP32618 956 aa12.35□□□□□ -0.43
LCB1YMR296C ERC1P38767 581 aa12.35□□□□□ -0.43
LCB1YMR296C SSB2P40150 613 aaKnown RBP12.35□□□□□ -0.43
LCB1YMR296C HIF1Q12373 385 aa12.35□□□□□ -0.43
LCB1YMR296C UBR2Q07963 1872 aa12.34□□□□□ -0.43
LCB1YMR296C MAK16P10962 306 aaPredicted RBP12.34□□□□□ -0.43
LCB1YMR296C MUK1Q02866 612 aa12.34□□□□□ -0.43
LCB1YMR296C ATG23Q06671 453 aa12.34□□□□□ -0.43
LCB1YMR296C AHC1Q12433 566 aa12.34□□□□□ -0.43
LCB1YMR296C DAL7P21826 554 aa12.33□□□□□ -0.44
LCB1YMR296C FUB1P25659 250 aa12.33□□□□□ -0.44
LCB1YMR296C PAP1P29468 568 aaKnown RBP12.33□□□□□ -0.44
LCB1YMR296C XRS2P33301 854 aa12.33□□□□□ -0.44
LCB1YMR296C RRP1P35178 278 aaPredicted RBP12.33□□□□□ -0.44
LCB1YMR296C MSC7P38694 644 aa12.33□□□□□ -0.44
LCB1YMR296C CCT4P39078 528 aaKnown RBP12.33□□□□□ -0.44
LCB1YMR296C UTP13Q05946 817 aaKnown RBP12.33□□□□□ -0.44
LCB1YMR296C PLP2Q12017 286 aa12.33□□□□□ -0.44
LCB1YMR296C SCP160P06105 1222 aaKnown RBP RIP-Chip data12.32□□□□□ -0.44 RIP-Chip
LCB1YMR296C DBP5P20449 482 aaKnown RBP12.32□□□□□ -0.44
LCB1YMR296C YVH1Q02256 364 aaKnown RBP12.32□□□□□ -0.44
LCB1YMR296C HFI1Q12060 488 aa12.32□□□□□ -0.44
LCB1YMR296C RPO26P20435 155 aa12.32□□□□□ -0.44
LCB1YMR296C APL1P27351 700 aa12.32□□□□□ -0.44
LCB1YMR296C SRB4P32569 687 aa12.32□□□□□ -0.44
LCB1YMR296C TMT1P32643 299 aa12.32□□□□□ -0.44
LCB1YMR296C COT1P32798 439 aa12.32□□□□□ -0.44
LCB1YMR296C DRE2P36152 348 aa12.32□□□□□ -0.44
LCB1YMR296C JJJ3P47138 172 aa12.32□□□□□ -0.44
LCB1YMR296C YGR035CP53222 116 aa12.32□□□□□ -0.44
LCB1YMR296C IES4Q08561 116 aa12.32□□□□□ -0.44
LCB1YMR296C SWI6P09959 803 aa12.31□□□□□ -0.44
LCB1YMR296C CKI1P20485 582 aa12.31□□□□□ -0.44
LCB1YMR296C YFL034WP43564 1073 aa12.31□□□□□ -0.44
LCB1YMR296C RTT102P53330 157 aa12.31□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms