RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W BTN2P53286 410 aa12.81□□□□□ -0.36
CUE1YMR264W CWC22P53333 577 aaKnown RBP12.81□□□□□ -0.36
CUE1YMR264W UBP3Q01477 912 aaKnown RBP RIP-Chip data12.81□□□□□ -0.36not detected
CUE1YMR264W SLD5Q03406 294 aa12.81□□□□□ -0.36
CUE1YMR264W SMC5Q08204 1093 aa12.81□□□□□ -0.36
CUE1YMR264W CFT2Q12102 859 aaPredicted RBP12.81□□□□□ -0.36
CUE1YMR264W YKL068W-AQ3E826 78 aa12.81□□□□□ -0.36
CUE1YMR264W NAM7P30771 971 aaKnown RBP12.8□□□□□ -0.36
CUE1YMR264W EUG1P32474 517 aa12.8□□□□□ -0.36
CUE1YMR264W MUD1P32605 298 aaKnown RBP12.8□□□□□ -0.36
CUE1YMR264W SEC8P32855 1065 aa12.8□□□□□ -0.36
CUE1YMR264W TVP38P36164 337 aa12.8□□□□□ -0.36
CUE1YMR264W MAD1P40957 749 aa12.8□□□□□ -0.36
CUE1YMR264W AVT1P47082 602 aa12.8□□□□□ -0.36
CUE1YMR264W ESBP6P53918 673 aa12.8□□□□□ -0.36
CUE1YMR264W UTP14Q04500 899 aaKnown RBP12.8□□□□□ -0.36
CUE1YMR264W YML082WQ04533 649 aaKnown RBP12.8□□□□□ -0.36
CUE1YMR264W ERG11P10614 530 aa12.79□□□□□ -0.36
CUE1YMR264W PKC1P24583 1151 aa12.79□□□□□ -0.36
CUE1YMR264W COT1P32798 439 aa12.79□□□□□ -0.36
CUE1YMR264W YIL089WP40500 205 aa12.79□□□□□ -0.36
CUE1YMR264W KAP114P53067 1004 aa12.79□□□□□ -0.36
CUE1YMR264W ROD1Q02805 837 aa12.79□□□□□ -0.36
CUE1YMR264W RAD54P32863 898 aa12.78□□□□□ -0.36
CUE1YMR264W YKL050CP35736 922 aa12.78□□□□□ -0.36
CUE1YMR264W VPS29P38759 282 aa12.78□□□□□ -0.36
CUE1YMR264W CDC53Q12018 815 aaKnown RBP12.78□□□□□ -0.36
CUE1YMR264W SLX4Q12098 748 aa12.78□□□□□ -0.36
CUE1YMR264W YDL206WQ12424 762 aa12.78□□□□□ -0.36
CUE1YMR264W RMP1Q12530 201 aa12.78□□□□□ -0.36
CUE1YMR264W DED1P06634 604 aaKnown RBP12.77□□□□□ -0.37
CUE1YMR264W KIP1P28742 1111 aa12.77□□□□□ -0.37
CUE1YMR264W NFU1P32860 256 aa12.77□□□□□ -0.37
CUE1YMR264W YEL025CP39991 1188 aa12.77□□□□□ -0.37
CUE1YMR264W MVP1P40959 511 aaKnown RBP12.77□□□□□ -0.37
CUE1YMR264W RTT102P53330 157 aa12.77□□□□□ -0.37
CUE1YMR264W SYH1Q02875 849 aaKnown RBP12.77□□□□□ -0.37
CUE1YMR264W NOP6Q07623 225 aaKnown RBP12.77□□□□□ -0.37
CUE1YMR264W NUR1Q12066 484 aa12.77□□□□□ -0.37
CUE1YMR264W VMA1P17255 1071 aaKnown RBP12.76□□□□□ -0.37
CUE1YMR264W IXR1P33417 597 aa12.76□□□□□ -0.37
CUE1YMR264W PCS60P38137 543 aaKnown RBP RIP-Chip data12.76□□□□□ -0.37 RIP-Chip
CUE1YMR264W DIG1Q03063 452 aaKnown RBP12.76□□□□□ -0.37
CUE1YMR264W YMR018WQ04364 514 aa12.76□□□□□ -0.37
CUE1YMR264W DUS4Q06063 367 aa12.76□□□□□ -0.37
CUE1YMR264W TYW1Q08960 810 aaKnown RBP12.76□□□□□ -0.37
CUE1YMR264W CDC8P00572 216 aa12.75□□□□□ -0.37
CUE1YMR264W TFC4P33339 1025 aa12.75□□□□□ -0.37
CUE1YMR264W PIN4P34217 668 aaKnown RBP RIP-Chip data12.75□□□□□ -0.37not detected
CUE1YMR264W TRZ1P36159 838 aaPredicted RBP12.75□□□□□ -0.37
CUE1YMR264W TDA3P38758 523 aa12.75□□□□□ -0.37
CUE1YMR264W JJJ1P53863 590 aa12.75□□□□□ -0.37
CUE1YMR264W VTC3Q02725 835 aa12.75□□□□□ -0.37
CUE1YMR264W URH1Q04179 340 aa12.75□□□□□ -0.37
CUE1YMR264W VTI1Q04338 217 aa12.75□□□□□ -0.37
CUE1YMR264W COQ9Q05779 260 aa12.75□□□□□ -0.37
CUE1YMR264W GPI13Q07830 1017 aa12.75□□□□□ -0.37
CUE1YMR264W SNF1P06782 633 aaKnown RBP12.74□□□□□ -0.37
CUE1YMR264W BLI1P35727 113 aa12.74□□□□□ -0.37
CUE1YMR264W DBP7P36120 742 aaKnown RBP12.74□□□□□ -0.37
CUE1YMR264W RCK2P38623 610 aa12.74□□□□□ -0.37
CUE1YMR264W EAF5P39995 279 aa12.74□□□□□ -0.37
CUE1YMR264W NPP2P39997 493 aa12.74□□□□□ -0.37
CUE1YMR264W MIC19P43594 170 aa12.74□□□□□ -0.37
CUE1YMR264W HSH155P49955 971 aaKnown RBP12.74□□□□□ -0.37
CUE1YMR264W ENV11P53246 860 aa12.74□□□□□ -0.37
CUE1YMR264W UTP13Q05946 817 aaKnown RBP12.74□□□□□ -0.37
CUE1YMR264W IES4Q08561 116 aa12.74□□□□□ -0.37
CUE1YMR264W CDC33P07260 213 aaKnown RBP12.73□□□□□ -0.37
CUE1YMR264W SEC21P32074 935 aaKnown RBP12.73□□□□□ -0.37
CUE1YMR264W EXO5P38289 585 aa12.73□□□□□ -0.37
CUE1YMR264W PSY2P40164 858 aa12.73□□□□□ -0.37
CUE1YMR264W MDR1P53258 950 aa12.73□□□□□ -0.37
CUE1YMR264W JIP4Q03361 876 aa12.73□□□□□ -0.37
CUE1YMR264W YMR321CQ04898 105 aa12.73□□□□□ -0.37
CUE1YMR264W YLL058WQ12198 575 aa12.73□□□□□ -0.37
CUE1YMR264W OSW2Q12202 724 aa12.73□□□□□ -0.37
CUE1YMR264W ZRT2Q12436 422 aa12.73□□□□□ -0.37
CUE1YMR264W SPT2P06843 333 aaPredicted RBP12.72□□□□□ -0.37
CUE1YMR264W CDC11P32458 415 aa12.72□□□□□ -0.37
CUE1YMR264W GCG1P32656 232 aaKnown RBP12.72□□□□□ -0.37
CUE1YMR264W MUD2P36084 527 aaKnown RBP12.72□□□□□ -0.37
CUE1YMR264W BCH2P36122 765 aa12.72□□□□□ -0.37
CUE1YMR264W RPC17P47076 161 aa12.72□□□□□ -0.37
CUE1YMR264W YNL146WP53906 100 aa12.72□□□□□ -0.37
CUE1YMR264W IRE1P32361 1115 aa12.71□□□□□ -0.37
CUE1YMR264W RPS7BP48164 190 aaKnown RBP12.71□□□□□ -0.37
CUE1YMR264W CLA4P48562 842 aa12.71□□□□□ -0.37
CUE1YMR264W ECI1Q05871 280 aa12.71□□□□□ -0.37
CUE1YMR264W RGA2Q06407 1009 aa12.71□□□□□ -0.37
CUE1YMR264W VPS70P47161 811 aa12.7□□□□□ -0.38
CUE1YMR264W PEX21P50091 288 aa12.7□□□□□ -0.38
CUE1YMR264W CUL3P53202 744 aa12.7□□□□□ -0.38
CUE1YMR264W TBF1Q02457 562 aa12.7□□□□□ -0.38
CUE1YMR264W CEF1Q03654 590 aaPredicted RBP12.7□□□□□ -0.38
CUE1YMR264W MSC6Q08818 692 aaKnown RBP12.7□□□□□ -0.38
CUE1YMR264W APL5Q08951 932 aaKnown RBP12.7□□□□□ -0.38
CUE1YMR264W SPO21Q12411 609 aa12.7□□□□□ -0.38
CUE1YMR264W TRM11Q12463 433 aa12.7□□□□□ -0.38
CUE1YMR264W YDR461C-AQ2V2P7 80 aa12.7□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 192.7 ms