RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C OYE2Q03558 400 aaKnown RBP1.08□□□□□ -2.24
RKR1YMR247C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
RKR1YMR247C CDA2Q06703 312 aa1.08□□□□□ -2.24
RKR1YMR247C FMP25Q08023 583 aa1.08□□□□□ -2.24
RKR1YMR247C HMI1Q12039 706 aa1.08□□□□□ -2.24
RKR1YMR247C TY1A-GR1Q12085 440 aa1.08□□□□□ -2.24
RKR1YMR247C SWM1Q12379 170 aa1.08□□□□□ -2.24
RKR1YMR247C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.08□□□□□ -2.24
RKR1YMR247C TY1A-OLQ92392 440 aaKnown RBP1.08□□□□□ -2.24
RKR1YMR247C RPS13P05756 151 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C LAT1P12695 482 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C HCM1P25364 564 aa1.07□□□□□ -2.24
RKR1YMR247C APL1P27351 700 aa1.07□□□□□ -2.24
RKR1YMR247C LOT5P34234 306 aa1.07□□□□□ -2.24
RKR1YMR247C YKR073CP36153 106 aa1.07□□□□□ -2.24
RKR1YMR247C YLF2P38746 405 aa1.07□□□□□ -2.24
RKR1YMR247C PIG2P40187 538 aa1.07□□□□□ -2.24
RKR1YMR247C ARG2P40360 574 aa1.07□□□□□ -2.24
RKR1YMR247C DUS4Q06063 367 aa1.07□□□□□ -2.24
RKR1YMR247C RSC3Q06639 885 aa1.07□□□□□ -2.24
RKR1YMR247C CDA1Q06702 301 aa1.07□□□□□ -2.24
RKR1YMR247C RPS9AO13516 197 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C RPL8BP29453 256 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C EFT1P32324 842 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C DHR2P36009 735 aaPredicted RBP1.07□□□□□ -2.24
RKR1YMR247C SET5P38890 526 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C AKR1P39010 764 aa1.07□□□□□ -2.24
RKR1YMR247C ZRG8P40021 1076 aa1.07□□□□□ -2.24
RKR1YMR247C NCS6P53088 359 aa1.07□□□□□ -2.24
RKR1YMR247C MTD1Q02046 320 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C ROD1Q02805 837 aa1.07□□□□□ -2.24
RKR1YMR247C PKH1Q03407 766 aa1.07□□□□□ -2.24
RKR1YMR247C ADY4Q05955 493 aa1.07□□□□□ -2.24
RKR1YMR247C SGO1Q08490 590 aa1.07□□□□□ -2.24
RKR1YMR247C SSF2Q12153 453 aaPredicted RBP1.07□□□□□ -2.24
RKR1YMR247C DIF1O13577 133 aa1.07□□□□□ -2.24
RKR1YMR247C YLR415CO13578 112 aa1.07□□□□□ -2.24
RKR1YMR247C KGD2P19262 463 aaPredicted RBP1.07□□□□□ -2.24
RKR1YMR247C ACO1P19414 778 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
RKR1YMR247C KIN82P25341 720 aa1.07□□□□□ -2.24
RKR1YMR247C PPH3P32345 308 aa1.07□□□□□ -2.24
RKR1YMR247C DUT1P33317 147 aa1.07□□□□□ -2.24
RKR1YMR247C YIL166CP40445 542 aa1.07□□□□□ -2.24
RKR1YMR247C GTS1P40956 396 aa1.07□□□□□ -2.24
RKR1YMR247C BAP3P41815 604 aa1.07□□□□□ -2.24
RKR1YMR247C MON1P53129 644 aa1.07□□□□□ -2.24
RKR1YMR247C ATG4P53867 494 aa1.07□□□□□ -2.24
RKR1YMR247C EEB1Q02891 456 aa1.07□□□□□ -2.24
RKR1YMR247C GDE1Q02979 1223 aa1.07□□□□□ -2.24
RKR1YMR247C DUS3Q06053 668 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C ESC8Q08119 714 aa1.07□□□□□ -2.24
RKR1YMR247C TGL5Q12043 749 aa1.07□□□□□ -2.24
RKR1YMR247C PUS9Q12069 462 aa1.07□□□□□ -2.24
RKR1YMR247C PEP1P32319 1579 aa1.07□□□□□ -2.24
RKR1YMR247C PFK1P16861 987 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C MSH2P25847 964 aa1.07□□□□□ -2.24
RKR1YMR247C CAP1P28495 268 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C POL12P38121 705 aaPredicted RBP1.07□□□□□ -2.24
RKR1YMR247C GIC1P38785 314 aa1.07□□□□□ -2.24
RKR1YMR247C FAA3P39002 694 aa1.07□□□□□ -2.24
RKR1YMR247C PZF1P39933 429 aa1.07□□□□□ -2.24
RKR1YMR247C SAH1P39954 449 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C AIM21P40563 679 aa1.07□□□□□ -2.24
RKR1YMR247C SPO1P53541 631 aa1.07□□□□□ -2.24
RKR1YMR247C SSL2Q00578 843 aa1.07□□□□□ -2.24
RKR1YMR247C YKR011CQ02209 353 aa1.07□□□□□ -2.24
RKR1YMR247C RRP5Q05022 1729 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C COQ11Q05892 277 aa1.07□□□□□ -2.24
RKR1YMR247C EAF1Q06337 982 aa1.07□□□□□ -2.24
RKR1YMR247C ATG23Q06671 453 aa1.07□□□□□ -2.24
RKR1YMR247C TPO1Q07824 586 aa1.07□□□□□ -2.24
RKR1YMR247C SLK19Q08581 821 aaKnown RBP1.07□□□□□ -2.24
RKR1YMR247C TGS1Q12052 315 aa1.07□□□□□ -2.24
RKR1YMR247C UPC2Q12151 913 aa1.07□□□□□ -2.24
RKR1YMR247C NTO1Q12311 748 aa1.07□□□□□ -2.24
RKR1YMR247C NDJ1Q12366 352 aa1.07□□□□□ -2.24
RKR1YMR247C YOR111WQ99210 232 aa1.07□□□□□ -2.24
RKR1YMR247C SIR3P06701 978 aa1.06□□□□□ -2.24
RKR1YMR247C CTS1P29029 562 aa1.06□□□□□ -2.24
RKR1YMR247C PET127P32606 800 aa1.06□□□□□ -2.24
RKR1YMR247C MCM7P38132 845 aa1.06□□□□□ -2.24
RKR1YMR247C ASI2P53895 289 aa1.06□□□□□ -2.24
RKR1YMR247C APM1Q00776 475 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C RAT1Q02792 1006 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C HMO1Q03973 246 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C GAD1Q04792 585 aa1.06□□□□□ -2.24
RKR1YMR247C YDL073WQ07454 984 aa1.06□□□□□ -2.24
RKR1YMR247C NUP170P38181 1502 aa1.06□□□□□ -2.24
RKR1YMR247C TUB2P02557 457 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C BI4P03879 638 aa1.06□□□□□ -2.24
RKR1YMR247C SUP35P05453 685 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C PPR1P07272 904 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C YER152CP10356 443 aa1.06□□□□□ -2.24
RKR1YMR247C CAF20P12962 161 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C CBP3P21560 335 aa1.06□□□□□ -2.24
RKR1YMR247C GAS1P22146 559 aaKnown RBP1.06□□□□□ -2.24
RKR1YMR247C KCC4P25389 1037 aa1.06□□□□□ -2.24
RKR1YMR247C URA1P28272 314 aaPredicted RBP1.06□□□□□ -2.24
RKR1YMR247C HOG1P32485 435 aa1.06□□□□□ -2.24
RKR1YMR247C AIM26P32858 118 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms