RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SDP1P40479 209 aa4.39□□□□□ -1.71
UBX4YMR067C EAF1Q06337 982 aa4.39□□□□□ -1.71
UBX4YMR067C TRP4P07285 380 aaPredicted RBP4.38□□□□□ -1.71
UBX4YMR067C KTR4P38131 464 aa4.38□□□□□ -1.71
UBX4YMR067C CTF8P38877 133 aa4.38□□□□□ -1.71
UBX4YMR067C BUL1P48524 976 aa4.38□□□□□ -1.71
UBX4YMR067C YKR011CQ02209 353 aa4.38□□□□□ -1.71
UBX4YMR067C MPH2P0CD99 609 aa4.37□□□□□ -1.71
UBX4YMR067C RAD4P14736 754 aa4.37□□□□□ -1.71
UBX4YMR067C HSP60P19882 572 aaKnown RBP4.37□□□□□ -1.71
UBX4YMR067C CAD1P24813 409 aaKnown RBP4.37□□□□□ -1.71
UBX4YMR067C ARE1P25628 610 aa4.37□□□□□ -1.71
UBX4YMR067C SSL1Q04673 461 aaPredicted RBP4.37□□□□□ -1.71
UBX4YMR067C HBN1Q96VH4 193 aa4.37□□□□□ -1.71
UBX4YMR067C MSD1P15179 658 aaKnown RBP4.36□□□□□ -1.71
UBX4YMR067C RAD53P22216 821 aa4.36□□□□□ -1.71
UBX4YMR067C ERT1P38140 529 aa4.36□□□□□ -1.71
UBX4YMR067C YIL108WP40483 696 aaKnown RBP4.36□□□□□ -1.71
UBX4YMR067C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
UBX4YMR067C UBX5Q06682 500 aa4.36□□□□□ -1.71
UBX4YMR067C YPR071WQ12346 211 aa4.36□□□□□ -1.71
UBX4YMR067C RPS9AO13516 197 aaKnown RBP4.35□□□□□ -1.71
UBX4YMR067C SEC21P32074 935 aaKnown RBP4.35□□□□□ -1.71
UBX4YMR067C OAR1P35731 278 aa4.35□□□□□ -1.71
UBX4YMR067C YBR284WP38150 797 aa4.35□□□□□ -1.71
UBX4YMR067C CEP3P40969 608 aa4.35□□□□□ -1.71
UBX4YMR067C HUL4P40985 892 aa4.35□□□□□ -1.71
UBX4YMR067C NIT3P49954 291 aa4.35□□□□□ -1.71
UBX4YMR067C HDA1P53973 706 aa4.35□□□□□ -1.71
UBX4YMR067C SLU7Q02775 382 aaKnown RBP4.35□□□□□ -1.71
UBX4YMR067C PEX19Q07418 342 aa4.35□□□□□ -1.71
UBX4YMR067C YDL124WQ07551 312 aaKnown RBP4.35□□□□□ -1.71
UBX4YMR067C YLR040CQ07988 224 aa4.35□□□□□ -1.71
UBX4YMR067C ENV7Q12003 364 aa4.35□□□□□ -1.71
UBX4YMR067C CIT1P00890 479 aa4.34□□□□□ -1.71
UBX4YMR067C RPD3P32561 433 aa4.34□□□□□ -1.71
UBX4YMR067C EMC3P36039 253 aa4.34□□□□□ -1.71
UBX4YMR067C UBP6P43593 499 aaKnown RBP4.34□□□□□ -1.71
UBX4YMR067C NOG2P53742 486 aaKnown RBP4.34□□□□□ -1.71
UBX4YMR067C GIS1Q03833 894 aa4.34□□□□□ -1.71
UBX4YMR067C OMS1Q06668 471 aa4.34□□□□□ -1.71
UBX4YMR067C SWM1Q12379 170 aa4.34□□□□□ -1.71
UBX4YMR067C TRM11Q12463 433 aa4.34□□□□□ -1.71
UBX4YMR067C TAD3Q9URQ3 322 aa4.34□□□□□ -1.71
UBX4YMR067C ERG4P25340 473 aa4.33□□□□□ -1.72
UBX4YMR067C MOH1P38191 138 aa4.33□□□□□ -1.72
UBX4YMR067C YHR078WP38799 552 aa4.33□□□□□ -1.72
UBX4YMR067C TIM54P47045 478 aa4.33□□□□□ -1.72
UBX4YMR067C PUS2P53167 370 aa4.33□□□□□ -1.72
UBX4YMR067C YGR125WP53273 1036 aa4.33□□□□□ -1.72
UBX4YMR067C ERG5P54781 538 aa4.33□□□□□ -1.72
UBX4YMR067C RNT1Q02555 471 aa4.33□□□□□ -1.72
UBX4YMR067C TAF8Q03750 510 aa4.33□□□□□ -1.72
UBX4YMR067C YOL073CQ08232 322 aa4.33□□□□□ -1.72
UBX4YMR067C TUB3P09734 445 aaKnown RBP4.32□□□□□ -1.72
UBX4YMR067C CTF13P35203 478 aa4.32□□□□□ -1.72
UBX4YMR067C YHR020WP38708 688 aaKnown RBP4.32□□□□□ -1.72
UBX4YMR067C GGA2P38817 585 aaKnown RBP4.32□□□□□ -1.72
UBX4YMR067C TOP3P13099 656 aa4.31□□□□□ -1.72
UBX4YMR067C SUL1P38359 859 aa4.31□□□□□ -1.72
UBX4YMR067C DAM1P53267 343 aa4.31□□□□□ -1.72
UBX4YMR067C DUS1P53759 423 aaKnown RBP4.31□□□□□ -1.72
UBX4YMR067C REH1Q06709 432 aa4.31□□□□□ -1.72
UBX4YMR067C PPM2Q08282 695 aa4.31□□□□□ -1.72
UBX4YMR067C FLC1Q08967 793 aa4.31□□□□□ -1.72
UBX4YMR067C PPR1P07272 904 aaPredicted RBP4.3□□□□□ -1.72
UBX4YMR067C MET3P08536 511 aa4.3□□□□□ -1.72
UBX4YMR067C CYS3P31373 394 aaKnown RBP4.3□□□□□ -1.72
UBX4YMR067C ASI2P53895 289 aa4.3□□□□□ -1.72
UBX4YMR067C TIM44Q01852 431 aa4.3□□□□□ -1.72
UBX4YMR067C TOM70P07213 617 aaKnown RBP4.29□□□□□ -1.72
UBX4YMR067C GAL11P19659 1081 aa4.29□□□□□ -1.72
UBX4YMR067C NGG1P32494 702 aa4.29□□□□□ -1.72
UBX4YMR067C UBA2P52488 636 aa4.29□□□□□ -1.72
UBX4YMR067C DLT1Q04216 342 aa4.29□□□□□ -1.72
UBX4YMR067C BDF2Q07442 638 aa4.29□□□□□ -1.72
UBX4YMR067C HAL9Q12180 1030 aa4.29□□□□□ -1.72
UBX4YMR067C RPP1P38786 293 aa4.28□□□□□ -1.72
UBX4YMR067C GYP8P43570 497 aa4.28□□□□□ -1.72
UBX4YMR067C ALG2P43636 503 aa4.28□□□□□ -1.72
UBX4YMR067C NNF1P47149 201 aa4.28□□□□□ -1.72
UBX4YMR067C HUL5P53119 910 aa4.28□□□□□ -1.72
UBX4YMR067C YGR283CP53336 341 aaPredicted RBP4.28□□□□□ -1.72
UBX4YMR067C ATP25Q03153 612 aa4.28□□□□□ -1.72
UBX4YMR067C PKH1Q03407 766 aa4.28□□□□□ -1.72
UBX4YMR067C MCH5Q08777 521 aa4.28□□□□□ -1.72
UBX4YMR067C ACF2Q12168 779 aa4.28□□□□□ -1.72
UBX4YMR067C PRC1P00729 532 aa4.27□□□□□ -1.73
UBX4YMR067C CAN1P04817 590 aa4.27□□□□□ -1.73
UBX4YMR067C ALG7P07286 448 aa4.27□□□□□ -1.73
UBX4YMR067C STI1P15705 589 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
UBX4YMR067C DAL7P21826 554 aa4.27□□□□□ -1.73
UBX4YMR067C BET3P36149 193 aa4.27□□□□□ -1.73
UBX4YMR067C PZF1P39933 429 aa4.27□□□□□ -1.73
UBX4YMR067C ELO3P40319 345 aa4.27□□□□□ -1.73
UBX4YMR067C YOR022CQ12204 715 aa4.27□□□□□ -1.73
UBX4YMR067C CAF20P12962 161 aaKnown RBP4.26□□□□□ -1.73
UBX4YMR067C SET5P38890 526 aaKnown RBP4.26□□□□□ -1.73
UBX4YMR067C RSP5P39940 809 aaKnown RBP4.26□□□□□ -1.73
UBX4YMR067C VHR1P40522 640 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms