RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C DOM34P33309 386 aa6.91□□□□□ -1.3
NMD4YLR363C YKR078WP36158 585 aaKnown RBP6.91□□□□□ -1.3
NMD4YLR363C SIT1P39980 628 aa6.91□□□□□ -1.3
NMD4YLR363C ZRG8P40021 1076 aa6.91□□□□□ -1.3
NMD4YLR363C MND2P40577 368 aa6.91□□□□□ -1.3
NMD4YLR363C NNF1P47149 201 aa6.91□□□□□ -1.3
NMD4YLR363C PDR15Q04182 1529 aaKnown RBP6.91□□□□□ -1.3
NMD4YLR363C YOR093CQ12275 1648 aa6.9□□□□□ -1.3
NMD4YLR363C YLR358CO13565 187 aa6.9□□□□□ -1.3
NMD4YLR363C ENA1P13587 1091 aa6.9□□□□□ -1.3
NMD4YLR363C RPC82P32349 654 aa6.9□□□□□ -1.3
NMD4YLR363C NPP2P39997 493 aa6.9□□□□□ -1.3
NMD4YLR363C ALR2P43553 858 aa6.9□□□□□ -1.3
NMD4YLR363C ERP6P53198 216 aa6.9□□□□□ -1.3
NMD4YLR363C GTF1P53260 183 aaPredicted RBP6.9□□□□□ -1.3
NMD4YLR363C ENA2Q01896 1091 aa6.9□□□□□ -1.3
NMD4YLR363C EAF1Q06337 982 aa6.9□□□□□ -1.3
NMD4YLR363C ACK1Q07622 623 aaPredicted RBP6.9□□□□□ -1.3
NMD4YLR363C ENA5Q12691 1091 aa6.9□□□□□ -1.3
NMD4YLR363C PRE10P21242 288 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
NMD4YLR363C CDC11P32458 415 aa6.89□□□□□ -1.31
NMD4YLR363C HBS1P32769 611 aaKnown RBP6.89□□□□□ -1.31
NMD4YLR363C YRO2P38079 344 aa6.89□□□□□ -1.31
NMD4YLR363C YER158CP40095 573 aa6.89□□□□□ -1.31
NMD4YLR363C CDC6P09119 513 aa6.88□□□□□ -1.31
NMD4YLR363C HSF1P10961 833 aa6.88□□□□□ -1.31
NMD4YLR363C CDC20P26309 610 aa6.88□□□□□ -1.31
NMD4YLR363C POA1P38218 177 aa6.88□□□□□ -1.31
NMD4YLR363C TIM54P47045 478 aa6.88□□□□□ -1.31
NMD4YLR363C YGR012WP53206 393 aa6.88□□□□□ -1.31
NMD4YLR363C VPS62P53285 467 aa6.88□□□□□ -1.31
NMD4YLR363C SFB2P53953 876 aa6.88□□□□□ -1.31
NMD4YLR363C TPO1Q07824 586 aa6.88□□□□□ -1.31
NMD4YLR363C RPP2AP05319 106 aaKnown RBP6.87□□□□□ -1.31
NMD4YLR363C ARE1P25628 610 aa6.87□□□□□ -1.31
NMD4YLR363C TSL1P38427 1098 aaKnown RBP6.87□□□□□ -1.31
NMD4YLR363C YPR196WQ06595 470 aa6.87□□□□□ -1.31
NMD4YLR363C CDA1Q06702 301 aa6.87□□□□□ -1.31
NMD4YLR363C ESC8Q08119 714 aa6.87□□□□□ -1.31
NMD4YLR363C CAT8P39113 1433 aa6.86□□□□□ -1.31
NMD4YLR363C HSP60P19882 572 aaKnown RBP6.86□□□□□ -1.31
NMD4YLR363C NPP1P25353 742 aa6.86□□□□□ -1.31
NMD4YLR363C EMC1P25574 760 aa6.86□□□□□ -1.31
NMD4YLR363C CDC48P25694 835 aaKnown RBP6.86□□□□□ -1.31
NMD4YLR363C SRP101P32916 621 aa6.86□□□□□ -1.31
NMD4YLR363C FLR1P38124 548 aa6.86□□□□□ -1.31
NMD4YLR363C CCC2P38995 1004 aa6.86□□□□□ -1.31
NMD4YLR363C GCV2P49095 1034 aa6.86□□□□□ -1.31
NMD4YLR363C PSP2P50109 593 aaKnown RBP6.86□□□□□ -1.31
NMD4YLR363C UBX5Q06682 500 aa6.86□□□□□ -1.31
NMD4YLR363C HMI1Q12039 706 aa6.86□□□□□ -1.31
NMD4YLR363C AFR1P33304 620 aa6.85□□□□□ -1.31
NMD4YLR363C MET12P46151 657 aa6.85□□□□□ -1.31
NMD4YLR363C CCM1P48237 864 aaPredicted RBP6.85□□□□□ -1.31
NMD4YLR363C LCD1Q04377 747 aa6.85□□□□□ -1.31
NMD4YLR363C ADY3Q07732 790 aa6.85□□□□□ -1.31
NMD4YLR363C ARO1P08566 1588 aaKnown RBP6.84□□□□□ -1.31
NMD4YLR363C YBR238CP38330 731 aaKnown RBP6.84□□□□□ -1.31
NMD4YLR363C YKE2P52553 114 aa6.84□□□□□ -1.31
NMD4YLR363C YGR125WP53273 1036 aa6.84□□□□□ -1.31
NMD4YLR363C CLU1Q03690 1277 aaKnown RBP6.84□□□□□ -1.31
NMD4YLR363C NOP12Q08208 459 aaKnown RBP6.84□□□□□ -1.31
NMD4YLR363C CIT1P00890 479 aa6.83□□□□□ -1.32
NMD4YLR363C HUL5P53119 910 aa6.83□□□□□ -1.32
NMD4YLR363C YAP6Q03935 383 aa6.83□□□□□ -1.32
NMD4YLR363C FLC1Q08967 793 aa6.83□□□□□ -1.32
NMD4YLR363C CHC1P22137 1653 aaKnown RBP6.83□□□□□ -1.32
NMD4YLR363C HIS5P07172 385 aa6.82□□□□□ -1.32
NMD4YLR363C SPE1P08432 466 aa6.82□□□□□ -1.32
NMD4YLR363C STI1P15705 589 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
NMD4YLR363C ATG19P35193 415 aa6.82□□□□□ -1.32
NMD4YLR363C YBR284WP38150 797 aa6.82□□□□□ -1.32
NMD4YLR363C HUL4P40985 892 aa6.82□□□□□ -1.32
NMD4YLR363C BUL2Q03758 920 aaKnown RBP6.82□□□□□ -1.32
NMD4YLR363C NSE3Q05541 303 aa6.82□□□□□ -1.32
NMD4YLR363C BDF2Q07442 638 aa6.82□□□□□ -1.32
NMD4YLR363C YPR071WQ12346 211 aa6.82□□□□□ -1.32
NMD4YLR363C HBN1Q96VH4 193 aa6.82□□□□□ -1.32
NMD4YLR363C YCR015CP25616 317 aa6.81□□□□□ -1.32
NMD4YLR363C REC104P33323 182 aa6.81□□□□□ -1.32
NMD4YLR363C YHR020WP38708 688 aaKnown RBP6.81□□□□□ -1.32
NMD4YLR363C TOK1P40310 691 aa6.81□□□□□ -1.32
NMD4YLR363C TAF1P46677 1066 aa6.81□□□□□ -1.32
NMD4YLR363C YLR224WQ05947 369 aa6.81□□□□□ -1.32
NMD4YLR363C CDC53Q12018 815 aaKnown RBP6.81□□□□□ -1.32
NMD4YLR363C YOL098CQ12496 1037 aa6.81□□□□□ -1.32
NMD4YLR363C YKL222CP35995 705 aa6.8□□□□□ -1.32
NMD4YLR363C PET10P36139 283 aa6.8□□□□□ -1.32
NMD4YLR363C MPT5P39016 859 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
NMD4YLR363C GIP4P39732 760 aa6.8□□□□□ -1.32
NMD4YLR363C GEA1P47102 1408 aaPredicted RBP6.8□□□□□ -1.32
NMD4YLR363C RAI1P53063 387 aaKnown RBP6.8□□□□□ -1.32
NMD4YLR363C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
NMD4YLR363C YDL124WQ07551 312 aaKnown RBP6.8□□□□□ -1.32
NMD4YLR363C NOT3P06102 836 aaKnown RBP6.79□□□□□ -1.32
NMD4YLR363C STE11P23561 717 aa6.79□□□□□ -1.32
NMD4YLR363C GGA2P38817 585 aaKnown RBP6.79□□□□□ -1.32
NMD4YLR363C CHA4P43634 648 aa6.79□□□□□ -1.32
NMD4YLR363C MSD1P15179 658 aaKnown RBP6.78□□□□□ -1.32
NMD4YLR363C LST4P34239 828 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms