RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YAP1801	P38856	637 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	TAF1	P46677	1066 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	YGR237C	P50089	785 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	SFB2	P53953	876 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	7.09	□□□□□ -1.27	not detected
RSA3	YLR221C	COG8	Q04632	607 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	THI73	Q07904	523 aa		7.09	□□□□□ -1.27
RSA3	YLR221C	RFA1	P22336	621 aa	Known RBP	7.08	□□□□□ -1.28
RSA3	YLR221C	CAF16	P43569	289 aa		7.08	□□□□□ -1.28
RSA3	YLR221C	ENV11	P53246	860 aa		7.08	□□□□□ -1.28
RSA3	YLR221C	RSC3	Q06639	885 aa		7.08	□□□□□ -1.28
RSA3	YLR221C	RAD18	P10862	487 aa		7.07	□□□□□ -1.28
RSA3	YLR221C	ECM21	P38167	1117 aa	Known RBP	7.07	□□□□□ -1.28
RSA3	YLR221C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.07	□□□□□ -1.28	not detected
RSA3	YLR221C	FOL2	P51601	243 aa	Known RBP	7.07	□□□□□ -1.28
RSA3	YLR221C	NOG2	P53742	486 aa	Known RBP	7.07	□□□□□ -1.28
RSA3	YLR221C	UME1	Q03010	460 aa		7.07	□□□□□ -1.28
RSA3	YLR221C	MRC1	P25588	1096 aa		7.06	□□□□□ -1.28
RSA3	YLR221C	APL1	P27351	700 aa		7.06	□□□□□ -1.28
RSA3	YLR221C	MGS1	P40151	587 aa		7.06	□□□□□ -1.28
RSA3	YLR221C	RSM24	Q03976	319 aa		7.06	□□□□□ -1.28
RSA3	YLR221C	PAF1	P38351	445 aa		7.05	□□□□□ -1.28
RSA3	YLR221C	GIP4	P39732	760 aa		7.05	□□□□□ -1.28
RSA3	YLR221C	SNP1	Q00916	300 aa	Predicted RBP	7.05	□□□□□ -1.28
RSA3	YLR221C	VPS30	Q02948	557 aa		7.05	□□□□□ -1.28
RSA3	YLR221C	PCL2	P25693	308 aa		7.04	□□□□□ -1.28
RSA3	YLR221C	SIZ1	Q04195	904 aa		7.04	□□□□□ -1.28
RSA3	YLR221C	XYL2	Q07993	356 aa		7.04	□□□□□ -1.28
RSA3	YLR221C	FAP7	Q12055	197 aa	Predicted RBP	7.04	□□□□□ -1.28
RSA3	YLR221C	NOT3	P06102	836 aa	Known RBP	7.03	□□□□□ -1.28
RSA3	YLR221C	SFL1	P20134	766 aa		7.03	□□□□□ -1.28
RSA3	YLR221C	URA1	P28272	314 aa	Predicted RBP	7.03	□□□□□ -1.28
RSA3	YLR221C	HOG1	P32485	435 aa		7.03	□□□□□ -1.28
RSA3	YLR221C	MCD4	P36051	919 aa		7.03	□□□□□ -1.28
RSA3	YLR221C	TY4A-J	P47023	414 aa		7.03	□□□□□ -1.28
RSA3	YLR221C	TAD1	P53065	400 aa		7.03	□□□□□ -1.28
RSA3	YLR221C	RPS9A	O13516	197 aa	Known RBP	7.02	□□□□□ -1.29
RSA3	YLR221C	DAL7	P21826	554 aa		7.02	□□□□□ -1.29
RSA3	YLR221C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.02	□□□□□ -1.29	not detected
RSA3	YLR221C	PER1	P25625	357 aa		7.02	□□□□□ -1.29
RSA3	YLR221C	TYS1	P36421	394 aa	Known RBP	7.02	□□□□□ -1.29
RSA3	YLR221C	FLR1	P38124	548 aa		7.02	□□□□□ -1.29
RSA3	YLR221C	RPN10	P38886	268 aa	Known RBP	7.02	□□□□□ -1.29
RSA3	YLR221C	RAI1	P53063	387 aa	Known RBP	7.02	□□□□□ -1.29
RSA3	YLR221C	RIM8	P53179	542 aa		7.02	□□□□□ -1.29
RSA3	YLR221C	MSC2	Q03455	724 aa		7.02	□□□□□ -1.29
RSA3	YLR221C	HSF1	P10961	833 aa		7.01	□□□□□ -1.29
RSA3	YLR221C	ABZ1	P37254	787 aa	Predicted RBP	7.01	□□□□□ -1.29
RSA3	YLR221C	ALY2	P47029	1046 aa		7.01	□□□□□ -1.29
RSA3	YLR221C	MET13	P53128	600 aa		7.01	□□□□□ -1.29
RSA3	YLR221C	HFD1	Q04458	532 aa		7.01	□□□□□ -1.29
RSA3	YLR221C	GUD1	Q07729	489 aa		7.01	□□□□□ -1.29
RSA3	YLR221C	STE13	P33894	931 aa		7	□□□□□ -1.29
RSA3	YLR221C	SNO2	P53823	222 aa		7	□□□□□ -1.29
RSA3	YLR221C	RIB2	Q12362	591 aa	Known RBP	7	□□□□□ -1.29
RSA3	YLR221C	CYS3	P31373	394 aa	Known RBP	6.99	□□□□□ -1.29
RSA3	YLR221C	SRP101	P32916	621 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	TYE7	P33122	291 aa	Predicted RBP	6.99	□□□□□ -1.29
RSA3	YLR221C	TOD6	P34219	525 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	PCM1	P38628	557 aa	Known RBP	6.99	□□□□□ -1.29
RSA3	YLR221C	DOT6	P40059	670 aa	Known RBP	6.99	□□□□□ -1.29
RSA3	YLR221C	RLP7	P40693	322 aa	Known RBP	6.99	□□□□□ -1.29
RSA3	YLR221C	CEP3	P40969	608 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	YJR008W	P47085	338 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	GPG1	P53130	126 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	YGR012W	P53206	393 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	YKR011C	Q02209	353 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	NHX1	Q04121	633 aa		6.99	□□□□□ -1.29
RSA3	YLR221C	DIF1	O13577	133 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	SOD2	P00447	233 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	SAP190	P36123	1033 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	SHR5	P41912	237 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	HXT16	P47185	567 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	PSP2	P50109	593 aa	Known RBP	6.98	□□□□□ -1.29
RSA3	YLR221C	HDA1	P53973	706 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	MTQ2	Q03920	221 aa	Predicted RBP	6.98	□□□□□ -1.29
RSA3	YLR221C	ATG33	Q06485	197 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	GUP2	Q08929	609 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	YPL277C	Q08989	487 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	GIN4	Q12263	1142 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	TMA17	Q12513	150 aa		6.98	□□□□□ -1.29
RSA3	YLR221C	RPS13	P05756	151 aa	Known RBP	6.97	□□□□□ -1.29
RSA3	YLR221C	ZRG8	P40021	1076 aa		6.97	□□□□□ -1.29
RSA3	YLR221C	NOP2	P40991	618 aa	Known RBP	6.97	□□□□□ -1.29
RSA3	YLR221C	PUS2	P53167	370 aa		6.97	□□□□□ -1.29
RSA3	YLR221C	FOL1	P53848	824 aa		6.97	□□□□□ -1.29
RSA3	YLR221C	LRS4	Q04087	347 aa	Known RBP	6.97	□□□□□ -1.29
RSA3	YLR221C	CDA1	Q06702	301 aa		6.97	□□□□□ -1.29
RSA3	YLR221C	ENA1	P13587	1091 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	CMP2	P14747	604 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	PRP19	P32523	503 aa	Known RBP	6.96	□□□□□ -1.3
RSA3	YLR221C	GRX7	P38068	203 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	HSL7	P38274	827 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	SET5	P38890	526 aa	Known RBP	6.96	□□□□□ -1.3
RSA3	YLR221C	CKB2	P38930	258 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	ENA2	Q01896	1091 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	ENA5	Q12691	1091 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	YBR182C-A	Q8TGU6	64 aa		6.96	□□□□□ -1.3
RSA3	YLR221C	PRC1	P00729	532 aa		6.95	□□□□□ -1.3
RSA3	YLR221C	HMG1	P12683	1054 aa		6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 197.3 ms