RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A NAB3P38996 802 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
YLR035C-AYLR035C-A GYP8P43570 497 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A ERP6P53198 216 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A GCN5Q03330 439 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A RAD18P10862 487 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A UBP5P39944 805 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A IRC24P40580 263 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A TCB2P48231 1178 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A ECL1P48235 211 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A YTA7P40340 1379 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A TUS1Q06412 1307 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A HSC82P15108 705 aaKnown RBP2.12□□□□□ -2.07
YLR035C-AYLR035C-A CDC12P32468 407 aaKnown RBP2.12□□□□□ -2.07
YLR035C-AYLR035C-A GEM1P39722 662 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A MPP10P47083 593 aaKnown RBP2.12□□□□□ -2.07
YLR035C-AYLR035C-A UBC9P50623 157 aaPredicted RBP2.12□□□□□ -2.07
YLR035C-AYLR035C-A TAD1P53065 400 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A TAF13P11747 167 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A CDC60P26637 1090 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A AFR1P33304 620 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A ENP1P38333 483 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A YHR020WP38708 688 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A SND1Q04007 877 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A NSE3Q05541 303 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A RXT3Q07458 294 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A PRP9P19736 530 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A VBA3P25594 458 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A TOA1P32773 286 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A BAP2P38084 609 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A TPO2P53283 614 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A YMR018WQ04364 514 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A ACK1Q07622 623 aaPredicted RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A RLP24Q07915 199 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A ESC8Q08119 714 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A NUP145P49687 1317 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A CDC11P32458 415 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A GIP4P39732 760 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A NNF1P47149 201 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A RAI1P53063 387 aaKnown RBP2.11□□□□□ -2.07
YLR035C-AYLR035C-A TRM13Q12383 476 aa2.11□□□□□ -2.07
YLR035C-AYLR035C-A CIT2P08679 460 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A ECM21P38167 1117 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A RPN3P40016 523 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A RPT2P40327 437 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A MND2P40577 368 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A FKH2P41813 862 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A PSP2P50109 593 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A SEC3P33332 1336 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A REC104P33323 182 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A JNM1P36224 373 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A SAK1P38990 1142 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A GUS1P46655 708 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YLR035C-AYLR035C-A ALY2P47029 1046 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A VPS30Q02948 557 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A HAL9Q12180 1030 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A SSK2P53599 1579 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A SPE1P08432 466 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A GAL11P19659 1081 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A SED4P25365 1065 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A TAT2P38967 592 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A MPT5P39016 859 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YLR035C-AYLR035C-A YEN1P40028 759 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A SEC27P41811 889 aaKnown RBP2.1□□□□□ -2.07
YLR035C-AYLR035C-A AIM14P53109 570 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YLR035C-AYLR035C-A MSC2Q03455 724 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A HIF1Q12373 385 aa2.1□□□□□ -2.07
YLR035C-AYLR035C-A PHO8P11491 566 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A CDC48P25694 835 aaKnown RBP2.09□□□□□ -2.07
YLR035C-AYLR035C-A CBF5P33322 483 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
YLR035C-AYLR035C-A MPE1P35728 441 aaKnown RBP2.09□□□□□ -2.07
YLR035C-AYLR035C-A PET10P36139 283 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A FLR1P38124 548 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A COX18P53239 316 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A CWC22P53333 577 aaKnown RBP2.09□□□□□ -2.07
YLR035C-AYLR035C-A SHE9Q04172 456 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A FPR4Q06205 392 aaPredicted RBP2.09□□□□□ -2.07
YLR035C-AYLR035C-A CDA1Q06702 301 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A GIN4Q12263 1142 aa2.09□□□□□ -2.07
YLR035C-AYLR035C-A RAD53P22216 821 aa2.09□□□□□ -2.08
YLR035C-AYLR035C-A CDC20P26309 610 aa2.09□□□□□ -2.08
YLR035C-AYLR035C-A YOL057WQ08225 711 aa2.09□□□□□ -2.08
YLR035C-AYLR035C-A MET7Q08645 548 aa2.09□□□□□ -2.08
YLR035C-AYLR035C-A NPC2Q12408 173 aa2.09□□□□□ -2.08
YLR035C-AYLR035C-A RRP5Q05022 1729 aaKnown RBP2.09□□□□□ -2.08
YLR035C-AYLR035C-A MEF1P25039 761 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A URA1P28272 314 aaPredicted RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A CYS3P31373 394 aaKnown RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A LST4P34239 828 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A TSA1P34760 196 aaKnown RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A UTP8P53276 713 aaKnown RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A HDA1P53973 706 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A MEH1Q02205 184 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A TAF8Q03750 510 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A YDR131CQ03899 556 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A MET6P05694 767 aaKnown RBP2.08□□□□□ -2.08
YLR035C-AYLR035C-A HSF1P10961 833 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A TOM20P35180 183 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A IES1P43579 692 aa2.08□□□□□ -2.08
YLR035C-AYLR035C-A RIM8P53179 542 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms