RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C DEF1P35732 738 aaKnown RBP6.81□□□□□ -1.32
SED5YLR026C MSS4P38994 779 aa6.81□□□□□ -1.32
SED5YLR026C HUL5P53119 910 aa6.81□□□□□ -1.32
SED5YLR026C YHR020WP38708 688 aaKnown RBP6.8□□□□□ -1.32
SED5YLR026C AIM21P40563 679 aa6.8□□□□□ -1.32
SED5YLR026C FLC1Q08967 793 aa6.8□□□□□ -1.32
SED5YLR026C PNS1Q12412 539 aa6.8□□□□□ -1.32
SED5YLR026C HDA1P53973 706 aa6.79□□□□□ -1.32
SED5YLR026C KIN4Q01919 800 aa6.79□□□□□ -1.32
SED5YLR026C YKR011CQ02209 353 aa6.79□□□□□ -1.32
SED5YLR026C TAF8Q03750 510 aa6.79□□□□□ -1.32
SED5YLR026C YDL124WQ07551 312 aaKnown RBP6.79□□□□□ -1.32
SED5YLR026C URA1P28272 314 aaPredicted RBP6.78□□□□□ -1.32
SED5YLR026C TYE7P33122 291 aaPredicted RBP6.78□□□□□ -1.32
SED5YLR026C YJL049WP47048 450 aa6.78□□□□□ -1.32
SED5YLR026C ENV7Q12003 364 aa6.78□□□□□ -1.32
SED5YLR026C FBP1P09201 348 aa6.77□□□□□ -1.33
SED5YLR026C HRR25P29295 494 aaKnown RBP6.77□□□□□ -1.33
SED5YLR026C HUL4P40985 892 aa6.77□□□□□ -1.33
SED5YLR026C UBP6P43593 499 aaKnown RBP6.77□□□□□ -1.33
SED5YLR026C SLI1P53304 468 aa6.77□□□□□ -1.33
SED5YLR026C SLU7Q02775 382 aaKnown RBP6.77□□□□□ -1.33
SED5YLR026C AIM39Q08223 395 aa6.77□□□□□ -1.33
SED5YLR026C ENB1Q08299 606 aa6.77□□□□□ -1.33
SED5YLR026C RPS9AO13516 197 aaKnown RBP6.76□□□□□ -1.33
SED5YLR026C TOM70P07213 617 aaKnown RBP6.76□□□□□ -1.33
SED5YLR026C MPH2P0CD99 609 aa6.76□□□□□ -1.33
SED5YLR026C BET3P36149 193 aa6.76□□□□□ -1.33
SED5YLR026C RSP5P39940 809 aaKnown RBP6.76□□□□□ -1.33
SED5YLR026C SDP1P40479 209 aa6.76□□□□□ -1.33
SED5YLR026C BDF2Q07442 638 aa6.76□□□□□ -1.33
SED5YLR026C GUP2Q08929 609 aa6.76□□□□□ -1.33
SED5YLR026C CDC53Q12018 815 aaKnown RBP6.75□□□□□ -1.33
SED5YLR026C SEC21P32074 935 aaKnown RBP6.74□□□□□ -1.33
SED5YLR026C BUL1P48524 976 aa6.74□□□□□ -1.33
SED5YLR026C RTA1P53047 317 aa6.74□□□□□ -1.33
SED5YLR026C NNF1P47149 201 aa6.73□□□□□ -1.33
SED5YLR026C CAN1P04817 590 aa6.72□□□□□ -1.33
SED5YLR026C DAL7P21826 554 aa6.72□□□□□ -1.33
SED5YLR026C CTF8P38877 133 aa6.72□□□□□ -1.33
SED5YLR026C GYP8P43570 497 aa6.72□□□□□ -1.33
SED5YLR026C PUS2P53167 370 aa6.72□□□□□ -1.33
SED5YLR026C NSE3Q05541 303 aa6.72□□□□□ -1.33
SED5YLR026C PEX19Q07418 342 aa6.72□□□□□ -1.33
SED5YLR026C CYS3P31373 394 aaKnown RBP6.71□□□□□ -1.34
SED5YLR026C EFT1P32324 842 aaKnown RBP6.71□□□□□ -1.34
SED5YLR026C SCT1P32784 759 aa6.71□□□□□ -1.34
SED5YLR026C CHS7P38843 316 aa6.71□□□□□ -1.34
SED5YLR026C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
SED5YLR026C NIT3P49954 291 aa6.71□□□□□ -1.34
SED5YLR026C TUB3P09734 445 aaKnown RBP6.69□□□□□ -1.34
SED5YLR026C STI1P15705 589 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
SED5YLR026C YCL002CP25565 263 aa6.69□□□□□ -1.34
SED5YLR026C EMC3P36039 253 aa6.69□□□□□ -1.34
SED5YLR026C YHR078WP38799 552 aa6.69□□□□□ -1.34
SED5YLR026C TAD1P53065 400 aa6.69□□□□□ -1.34
SED5YLR026C YGR283CP53336 341 aaPredicted RBP6.69□□□□□ -1.34
SED5YLR026C NOG2P53742 486 aaKnown RBP6.69□□□□□ -1.34
SED5YLR026C LRS4Q04087 347 aaKnown RBP6.69□□□□□ -1.34
SED5YLR026C URN1Q06525 465 aaKnown RBP6.69□□□□□ -1.34
SED5YLR026C YLR040CQ07988 224 aa6.69□□□□□ -1.34
SED5YLR026C HAL9Q12180 1030 aa6.69□□□□□ -1.34
SED5YLR026C YOR022CQ12204 715 aa6.69□□□□□ -1.34
SED5YLR026C YOL098CQ12496 1037 aa6.69□□□□□ -1.34
SED5YLR026C PHR1P05066 565 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SED5YLR026C GAL11P19659 1081 aa6.68□□□□□ -1.34
SED5YLR026C SUL1P38359 859 aa6.68□□□□□ -1.34
SED5YLR026C GGA2P38817 585 aaKnown RBP6.68□□□□□ -1.34
SED5YLR026C ALG2P43636 503 aa6.68□□□□□ -1.34
SED5YLR026C CTF4Q01454 927 aa6.68□□□□□ -1.34
SED5YLR026C SWM1Q12379 170 aa6.68□□□□□ -1.34
SED5YLR026C TRM13Q12383 476 aa6.68□□□□□ -1.34
SED5YLR026C DUS1P53759 423 aaKnown RBP6.67□□□□□ -1.34
SED5YLR026C ERG5P54781 538 aa6.67□□□□□ -1.34
SED5YLR026C TRP4P07285 380 aaPredicted RBP6.66□□□□□ -1.34
SED5YLR026C PRP4P20053 465 aaKnown RBP6.66□□□□□ -1.34
SED5YLR026C ERG4P25340 473 aa6.66□□□□□ -1.34
SED5YLR026C DAM1P53267 343 aa6.66□□□□□ -1.34
SED5YLR026C PRC1P00729 532 aa6.65□□□□□ -1.34
SED5YLR026C SRP40P32583 406 aaPredicted RBP6.65□□□□□ -1.34
SED5YLR026C CTF13P35203 478 aa6.65□□□□□ -1.34
SED5YLR026C SAP190P36123 1033 aa6.65□□□□□ -1.34
SED5YLR026C ERR1P0CX10 437 aa6.64□□□□□ -1.35
SED5YLR026C ERR2P0CX11 437 aa6.64□□□□□ -1.35
SED5YLR026C VHR1P40522 640 aa6.64□□□□□ -1.35
SED5YLR026C YOL073CQ08232 322 aa6.64□□□□□ -1.35
SED5YLR026C YOR131CQ12486 218 aa6.64□□□□□ -1.35
SED5YLR026C KTR4P38131 464 aa6.63□□□□□ -1.35
SED5YLR026C YDR514CQ04408 483 aa6.63□□□□□ -1.35
SED5YLR026C MET7Q08645 548 aa6.63□□□□□ -1.35
SED5YLR026C TRM11Q12463 433 aa6.63□□□□□ -1.35
SED5YLR026C YKL091CP33324 310 aaKnown RBP6.62□□□□□ -1.35
SED5YLR026C SAK1P38990 1142 aa6.62□□□□□ -1.35
SED5YLR026C SSY5P47002 699 aa6.62□□□□□ -1.35
SED5YLR026C MRPS35P53292 345 aa6.62□□□□□ -1.35
SED5YLR026C YMR206WQ03695 313 aa6.62□□□□□ -1.35
SED5YLR026C PPM2Q08282 695 aa6.62□□□□□ -1.35
SED5YLR026C PER1P25625 357 aa6.61□□□□□ -1.35
SED5YLR026C SPC29P33419 253 aa6.61□□□□□ -1.35
SED5YLR026C RPP1P38786 293 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms