RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C DEF1P35732 738 aaKnown RBP6.05□□□□□ -1.44
RPF2YKR081C EXG2P52911 562 aa6.05□□□□□ -1.44
RPF2YKR081C TAF8Q03750 510 aa6.05□□□□□ -1.44
RPF2YKR081C BDF2Q07442 638 aa6.05□□□□□ -1.44
RPF2YKR081C YDL124WQ07551 312 aaKnown RBP6.05□□□□□ -1.44
RPF2YKR081C WHI4Q07655 649 aaKnown RBP6.05□□□□□ -1.44
RPF2YKR081C NSE3Q05541 303 aa6.04□□□□□ -1.44
RPF2YKR081C AIM39Q08223 395 aa6.04□□□□□ -1.44
RPF2YKR081C UPC2Q12151 913 aa6.04□□□□□ -1.44
RPF2YKR081C STI1P15705 589 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
RPF2YKR081C PFK1P16861 987 aaKnown RBP6.03□□□□□ -1.44
RPF2YKR081C GGA2P38817 585 aaKnown RBP6.03□□□□□ -1.44
RPF2YKR081C MSS4P38994 779 aa6.03□□□□□ -1.44
RPF2YKR081C KIN4Q01919 800 aa6.03□□□□□ -1.44
RPF2YKR081C TOP3P13099 656 aa6.02□□□□□ -1.45
RPF2YKR081C SED4P25365 1065 aa6.02□□□□□ -1.45
RPF2YKR081C UBP6P43593 499 aaKnown RBP6.02□□□□□ -1.45
RPF2YKR081C GUP2Q08929 609 aa6.02□□□□□ -1.45
RPF2YKR081C CDC53Q12018 815 aaKnown RBP6.02□□□□□ -1.45
RPF2YKR081C MPH2P0CD99 609 aa6.01□□□□□ -1.45
RPF2YKR081C URA1P28272 314 aaPredicted RBP6.01□□□□□ -1.45
RPF2YKR081C TYE7P33122 291 aaPredicted RBP6.01□□□□□ -1.45
RPF2YKR081C RSP5P39940 809 aaKnown RBP6.01□□□□□ -1.45
RPF2YKR081C YKR011CQ02209 353 aa6.01□□□□□ -1.45
RPF2YKR081C SSL1Q04673 461 aaPredicted RBP6.01□□□□□ -1.45
RPF2YKR081C ENB1Q08299 606 aa6.01□□□□□ -1.45
RPF2YKR081C ENV7Q12003 364 aa6.01□□□□□ -1.45
RPF2YKR081C YOL098CQ12496 1037 aa6.01□□□□□ -1.45
RPF2YKR081C TOM70P07213 617 aaKnown RBP6□□□□□ -1.45
RPF2YKR081C FBP1P09201 348 aa6□□□□□ -1.45
RPF2YKR081C GAL11P19659 1081 aa6□□□□□ -1.45
RPF2YKR081C STE14P32584 239 aa6□□□□□ -1.45
RPF2YKR081C JSN1P47135 1091 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
RPF2YKR081C NIT3P49954 291 aa6□□□□□ -1.45
RPF2YKR081C CAN1P04817 590 aa5.99□□□□□ -1.45
RPF2YKR081C RPD3P32561 433 aa5.99□□□□□ -1.45
RPF2YKR081C YIL108WP40483 696 aaKnown RBP5.99□□□□□ -1.45
RPF2YKR081C CEP3P40969 608 aa5.99□□□□□ -1.45
RPF2YKR081C HDA1P53973 706 aa5.99□□□□□ -1.45
RPF2YKR081C YOR131CQ12486 218 aa5.99□□□□□ -1.45
RPF2YKR081C RPS9AO13516 197 aaKnown RBP5.98□□□□□ -1.45
RPF2YKR081C KAR4P25583 335 aa5.98□□□□□ -1.45
RPF2YKR081C HRR25P29295 494 aaKnown RBP5.98□□□□□ -1.45
RPF2YKR081C BET3P36149 193 aa5.98□□□□□ -1.45
RPF2YKR081C OCA5P38738 679 aa5.98□□□□□ -1.45
RPF2YKR081C SDP1P40479 209 aa5.98□□□□□ -1.45
RPF2YKR081C EMC3P36039 253 aa5.97□□□□□ -1.45
RPF2YKR081C CTF8P38877 133 aa5.97□□□□□ -1.45
RPF2YKR081C NOG2P53742 486 aaKnown RBP5.97□□□□□ -1.45
RPF2YKR081C RAD53P22216 821 aa5.96□□□□□ -1.46
RPF2YKR081C SRP40P32583 406 aaPredicted RBP5.96□□□□□ -1.46
RPF2YKR081C CHS7P38843 316 aa5.96□□□□□ -1.46
RPF2YKR081C ALG2P43636 503 aa5.96□□□□□ -1.46
RPF2YKR081C RTA1P53047 317 aa5.96□□□□□ -1.46
RPF2YKR081C DAM1P53267 343 aa5.96□□□□□ -1.46
RPF2YKR081C CAD1P24813 409 aaKnown RBP5.95□□□□□ -1.46
RPF2YKR081C CHZ1P40019 153 aaPredicted RBP5.95□□□□□ -1.46
RPF2YKR081C PUS2P53167 370 aa5.95□□□□□ -1.46
RPF2YKR081C YGR283CP53336 341 aaPredicted RBP5.95□□□□□ -1.46
RPF2YKR081C LAS17Q12446 633 aa5.95□□□□□ -1.46
RPF2YKR081C GYP8P43570 497 aa5.94□□□□□ -1.46
RPF2YKR081C CYS3P31373 394 aaKnown RBP5.93□□□□□ -1.46
RPF2YKR081C UBA2P52488 636 aa5.93□□□□□ -1.46
RPF2YKR081C RPN4Q03465 531 aa5.93□□□□□ -1.46
RPF2YKR081C REH1Q06709 432 aa5.93□□□□□ -1.46
RPF2YKR081C PPM2Q08282 695 aa5.93□□□□□ -1.46
RPF2YKR081C DAL7P21826 554 aa5.92□□□□□ -1.46
RPF2YKR081C SEC21P32074 935 aaKnown RBP5.92□□□□□ -1.46
RPF2YKR081C YKL091CP33324 310 aaKnown RBP5.92□□□□□ -1.46
RPF2YKR081C YHR078WP38799 552 aa5.92□□□□□ -1.46
RPF2YKR081C SLU7Q02775 382 aaKnown RBP5.92□□□□□ -1.46
RPF2YKR081C PEX19Q07418 342 aa5.92□□□□□ -1.46
RPF2YKR081C SWM1Q12379 170 aa5.92□□□□□ -1.46
RPF2YKR081C TAD1P53065 400 aa5.91□□□□□ -1.46
RPF2YKR081C DUS1P53759 423 aaKnown RBP5.91□□□□□ -1.46
RPF2YKR081C YDR514CQ04408 483 aa5.91□□□□□ -1.46
RPF2YKR081C PHR1P05066 565 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
RPF2YKR081C TRP4P07285 380 aaPredicted RBP5.9□□□□□ -1.46
RPF2YKR081C EFT1P32324 842 aaKnown RBP5.9□□□□□ -1.46
RPF2YKR081C OAR1P35731 278 aa5.9□□□□□ -1.46
RPF2YKR081C YPT53P36019 220 aa5.9□□□□□ -1.46
RPF2YKR081C ATP25Q03153 612 aa5.9□□□□□ -1.46
RPF2YKR081C HAL9Q12180 1030 aa5.9□□□□□ -1.46
RPF2YKR081C TUB3P09734 445 aaKnown RBP5.89□□□□□ -1.47
RPF2YKR081C SPC29P33419 253 aa5.89□□□□□ -1.47
RPF2YKR081C PBP2P38151 413 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
RPF2YKR081C MOH1P38191 138 aa5.89□□□□□ -1.47
RPF2YKR081C SUL1P38359 859 aa5.89□□□□□ -1.47
RPF2YKR081C BUL1P48524 976 aa5.89□□□□□ -1.47
RPF2YKR081C MET7Q08645 548 aa5.89□□□□□ -1.47
RPF2YKR081C YOR022CQ12204 715 aa5.89□□□□□ -1.47
RPF2YKR081C TRM11Q12463 433 aa5.89□□□□□ -1.47
RPF2YKR081C PRC1P00729 532 aa5.88□□□□□ -1.47
RPF2YKR081C SAP190P36123 1033 aa5.88□□□□□ -1.47
RPF2YKR081C KTR4P38131 464 aa5.88□□□□□ -1.47
RPF2YKR081C BUD6P41697 788 aa5.88□□□□□ -1.47
RPF2YKR081C LRS4Q04087 347 aaKnown RBP5.88□□□□□ -1.47
RPF2YKR081C ERR1P0CX10 437 aa5.87□□□□□ -1.47
RPF2YKR081C ERR2P0CX11 437 aa5.87□□□□□ -1.47
RPF2YKR081C YCL002CP25565 263 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms