RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	GSF2	Q04697	403 aa	Known RBP	4.18	□□□□□ -1.74
YKT6	YKL196C	UPC2	Q12151	913 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	KAR4	P25583	335 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	STE14	P32584	239 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	MSS4	P38994	779 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	MSE1	P48525	536 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	UTP8	P53276	713 aa	Known RBP	4.17	□□□□□ -1.74
YKT6	YKL196C	EAF1	Q06337	982 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	HBN1	Q96VH4	193 aa		4.17	□□□□□ -1.74
YKT6	YKL196C	TOP3	P13099	656 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	MSD1	P15179	658 aa	Known RBP	4.16	□□□□□ -1.74
YKT6	YKL196C	PFK1	P16861	987 aa	Known RBP	4.16	□□□□□ -1.74
YKT6	YKL196C	PMI40	P29952	429 aa	Known RBP	4.16	□□□□□ -1.74
YKT6	YKL196C	STE13	P33894	931 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	AIM21	P40563	679 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	TPO2	P53283	614 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	RTS3	P53289	263 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	SLU7	Q02775	382 aa	Known RBP	4.16	□□□□□ -1.74
YKT6	YKL196C	LCD1	Q04377	747 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	PNS1	Q12412	539 aa		4.16	□□□□□ -1.74
YKT6	YKL196C	CAD1	P24813	409 aa	Known RBP	4.15	□□□□□ -1.75
YKT6	YKL196C	ARE1	P25628	610 aa		4.15	□□□□□ -1.75
YKT6	YKL196C	BRN1	P38170	754 aa		4.15	□□□□□ -1.75
YKT6	YKL196C	RPT2	P40327	437 aa	Known RBP	4.15	□□□□□ -1.75
YKT6	YKL196C	MPP10	P47083	593 aa	Known RBP	4.15	□□□□□ -1.75
YKT6	YKL196C	DOS2	P54858	310 aa		4.15	□□□□□ -1.75
YKT6	YKL196C	RPP2A	P05319	106 aa	Known RBP	4.14	□□□□□ -1.75
YKT6	YKL196C	SED4	P25365	1065 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	HRR25	P29295	494 aa	Known RBP	4.14	□□□□□ -1.75
YKT6	YKL196C	REC104	P33323	182 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	ATG19	P35193	415 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	HOS4	P40480	1083 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	TIM54	P47045	478 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	TCB2	P48231	1178 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	CCM1	P48237	864 aa	Predicted RBP	4.14	□□□□□ -1.75
YKT6	YKL196C	BUL1	P48524	976 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	ERP6	P53198	216 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	HDA1	P53973	706 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	TLG1	Q03322	224 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	SPO75	Q07798	868 aa		4.14	□□□□□ -1.75
YKT6	YKL196C	RFA1	P22336	621 aa	Known RBP	4.13	□□□□□ -1.75
YKT6	YKL196C	PET10	P36139	283 aa		4.13	□□□□□ -1.75
YKT6	YKL196C	CHS7	P38843	316 aa		4.13	□□□□□ -1.75
YKT6	YKL196C	YIL108W	P40483	696 aa	Known RBP	4.13	□□□□□ -1.75
YKT6	YKL196C	CEP3	P40969	608 aa		4.13	□□□□□ -1.75
YKT6	YKL196C	IOC3	P43596	787 aa		4.13	□□□□□ -1.75
YKT6	YKL196C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
YKT6	YKL196C	CIT1	P00890	479 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	FBP1	P09201	348 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	SEC21	P32074	935 aa	Known RBP	4.12	□□□□□ -1.75
YKT6	YKL196C	CDC11	P32458	415 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	YHR020W	P38708	688 aa	Known RBP	4.12	□□□□□ -1.75
YKT6	YKL196C	YGR125W	P53273	1036 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	ENV7	Q12003	364 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	TRM13	Q12383	476 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	OSH2	Q12451	1283 aa		4.12	□□□□□ -1.75
YKT6	YKL196C	HSP60	P19882	572 aa	Known RBP	4.11	□□□□□ -1.75
YKT6	YKL196C	URA1	P28272	314 aa	Predicted RBP	4.11	□□□□□ -1.75
YKT6	YKL196C	ATG36	P46983	293 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	HUL5	P53119	910 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	YKR011C	Q02209	353 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	AIM39	Q08223	395 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	ENB1	Q08299	606 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	YTA7	P40340	1379 aa		4.11	□□□□□ -1.75
YKT6	YKL196C	TYE7	P33122	291 aa	Predicted RBP	4.1	□□□□□ -1.75
YKT6	YKL196C	BET3	P36149	193 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	SDP1	P40479	209 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	TY4A-J	P47023	414 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	RTA1	P53047	317 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	VPS30	Q02948	557 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	TAF8	Q03750	510 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	YLR040C	Q07988	224 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	GUP2	Q08929	609 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	FLC1	Q08967	793 aa		4.1	□□□□□ -1.75
YKT6	YKL196C	EFT1	P32324	842 aa	Known RBP	4.09	□□□□□ -1.75
YKT6	YKL196C	MFT1	P33441	392 aa	Known RBP	4.09	□□□□□ -1.75
YKT6	YKL196C	CTF8	P38877	133 aa		4.09	□□□□□ -1.75
YKT6	YKL196C	GYP8	P43570	497 aa		4.09	□□□□□ -1.75
YKT6	YKL196C	UBP6	P43593	499 aa	Known RBP	4.09	□□□□□ -1.75
YKT6	YKL196C	YGL081W	P53156	320 aa		4.09	□□□□□ -1.75
YKT6	YKL196C	ERG5	P54781	538 aa		4.09	□□□□□ -1.75
YKT6	YKL196C	RPS9A	O13516	197 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	TUB3	P09734	445 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	MPH2	P0CD99	609 aa		4.08	□□□□□ -1.76
YKT6	YKL196C	PRP4	P20053	465 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	NMD2	P38798	1089 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	RSP5	P39940	809 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	CTF4	Q01454	927 aa		4.08	□□□□□ -1.76
YKT6	YKL196C	FPR4	Q06205	392 aa	Predicted RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	YSH1	Q06224	779 aa	Predicted RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	PEX19	Q07418	342 aa		4.08	□□□□□ -1.76
YKT6	YKL196C	YDL124W	Q07551	312 aa	Known RBP	4.08	□□□□□ -1.76
YKT6	YKL196C	TOM70	P07213	617 aa	Known RBP	4.07	□□□□□ -1.76
YKT6	YKL196C	YCL002C	P25565	263 aa		4.07	□□□□□ -1.76
YKT6	YKL196C	PIL1	P53252	339 aa	Known RBP	4.07	□□□□□ -1.76
YKT6	YKL196C	LRS4	Q04087	347 aa	Known RBP	4.07	□□□□□ -1.76
YKT6	YKL196C	BDF2	Q07442	638 aa		4.07	□□□□□ -1.76
YKT6	YKL196C	HAL9	Q12180	1030 aa		4.07	□□□□□ -1.76
YKT6	YKL196C	DAL7	P21826	554 aa		4.06	□□□□□ -1.76
YKT6	YKL196C	ERG4	P25340	473 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms