RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	RAD53	P22216	821 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	TYE7	P33122	291 aa	Predicted RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	SPC29	P33419	253 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	AIM3	P38266	947 aa	Known RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	FPR3	P38911	411 aa	Known RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	MET12	P46151	657 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	SPT20	P50875	604 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	GTF1	P53260	183 aa	Predicted RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	DOS2	P54858	310 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	ATP25	Q03153	612 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	YDR514C	Q04408	483 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	DUS4	Q06063	367 aa		5.82	□□□□□ -1.48
EBP2	YKL172W	NOP12	Q08208	459 aa	Known RBP	5.82	□□□□□ -1.48
EBP2	YKL172W	GYP8	P43570	497 aa		5.81	□□□□□ -1.48
EBP2	YKL172W	VPS62	P53285	467 aa		5.81	□□□□□ -1.48
EBP2	YKL172W	ACK1	Q07622	623 aa	Predicted RBP	5.81	□□□□□ -1.48
EBP2	YKL172W	YPL277C	Q08989	487 aa		5.81	□□□□□ -1.48
EBP2	YKL172W	HMI1	Q12039	706 aa		5.81	□□□□□ -1.48
EBP2	YKL172W	MDM12	Q92328	271 aa		5.81	□□□□□ -1.48
EBP2	YKL172W	MAL11	P53048	616 aa		5.8	□□□□□ -1.48
EBP2	YKL172W	YKR011C	Q02209	353 aa		5.8	□□□□□ -1.48
EBP2	YKL172W	HIS5	P07172	385 aa		5.79	□□□□□ -1.48
EBP2	YKL172W	CDC6	P09119	513 aa		5.79	□□□□□ -1.48
EBP2	YKL172W	CEP3	P40969	608 aa		5.79	□□□□□ -1.48
EBP2	YKL172W	EMC1	P25574	760 aa		5.78	□□□□□ -1.48
EBP2	YKL172W	PEX6	P33760	1030 aa		5.78	□□□□□ -1.48
EBP2	YKL172W	MNN1	P39106	762 aa		5.78	□□□□□ -1.48
EBP2	YKL172W	URM1	P40554	99 aa	Predicted RBP	5.78	□□□□□ -1.48
EBP2	YKL172W	PUS2	P53167	370 aa		5.78	□□□□□ -1.48
EBP2	YKL172W	MET7	Q08645	548 aa		5.78	□□□□□ -1.48
EBP2	YKL172W	DAL7	P21826	554 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	RNQ1	P25367	405 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	CDC20	P26309	610 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	BRN1	P38170	754 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	DSS1	P39112	969 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	GCV2	P49095	1034 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	TAD1	P53065	400 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	HDA1	P53973	706 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	YAP6	Q03935	383 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	NTG2	Q08214	380 aa		5.77	□□□□□ -1.49
EBP2	YKL172W	YLR358C	O13565	187 aa		5.76	□□□□□ -1.49
EBP2	YKL172W	CYS3	P31373	394 aa	Known RBP	5.76	□□□□□ -1.49
EBP2	YKL172W	TOD6	P34219	525 aa		5.76	□□□□□ -1.49
EBP2	YKL172W	YIL108W	P40483	696 aa	Known RBP	5.76	□□□□□ -1.49
EBP2	YKL172W	CHA4	P43634	648 aa		5.76	□□□□□ -1.49
EBP2	YKL172W	ZDS1	P50111	915 aa	Known RBP	5.76	□□□□□ -1.49
EBP2	YKL172W	RSC3	Q06639	885 aa		5.76	□□□□□ -1.49
EBP2	YKL172W	FBP1	P09201	348 aa		5.75	□□□□□ -1.49
EBP2	YKL172W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
EBP2	YKL172W	SED4	P25365	1065 aa		5.75	□□□□□ -1.49
EBP2	YKL172W	STO1	P34160	861 aa	Known RBP	5.75	□□□□□ -1.49
EBP2	YKL172W	MTC2	P34246	357 aa		5.75	□□□□□ -1.49
EBP2	YKL172W	SAP190	P36123	1033 aa		5.75	□□□□□ -1.49
EBP2	YKL172W	IRC24	P40580	263 aa		5.75	□□□□□ -1.49
EBP2	YKL172W	NOP14	Q99207	810 aa	Known RBP	5.75	□□□□□ -1.49
EBP2	YKL172W	STE11	P23561	717 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	VBA3	P25594	458 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	SFP1	P32432	683 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	RPD3	P32561	433 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	SPC42	P36094	363 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	SET5	P38890	526 aa	Known RBP	5.74	□□□□□ -1.49
EBP2	YKL172W	SSL1	Q04673	461 aa	Predicted RBP	5.74	□□□□□ -1.49
EBP2	YKL172W	YLR224W	Q05947	369 aa		5.74	□□□□□ -1.49
EBP2	YKL172W	PRC1	P00729	532 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	MEF1	P25039	761 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	YEL1	P34225	687 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	CTF8	P38877	133 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	SDP1	P40479	209 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	RLP7	P40693	322 aa	Known RBP	5.73	□□□□□ -1.49
EBP2	YKL172W	SHR5	P41912	237 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	CAF16	P43569	289 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	COG8	Q04632	607 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	UPC2	Q12151	913 aa		5.73	□□□□□ -1.49
EBP2	YKL172W	DIF1	O13577	133 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	CDC9	P04819	755 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	THI80	P35202	319 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	UBP5	P39944	805 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	ALY2	P47029	1046 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	NCS6	P53088	359 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	LRS4	Q04087	347 aa	Known RBP	5.72	□□□□□ -1.49
EBP2	YKL172W	WHI4	Q07655	649 aa	Known RBP	5.72	□□□□□ -1.49
EBP2	YKL172W	GUP2	Q08929	609 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	NPC2	Q12408	173 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	YGR161W-C	Q3E744	92 aa		5.72	□□□□□ -1.49
EBP2	YKL172W	SRD1	P09007	221 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	RPN10	P38886	268 aa	Known RBP	5.71	□□□□□ -1.5
EBP2	YKL172W	PLB1	P39105	664 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	TY4A-J	P47023	414 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	DUS1	P53759	423 aa	Known RBP	5.71	□□□□□ -1.5
EBP2	YKL172W	SNP1	Q00916	300 aa	Predicted RBP	5.71	□□□□□ -1.5
EBP2	YKL172W	TFB2	Q02939	513 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	HAL9	Q12180	1030 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	YOR022C	Q12204	715 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	YBR182C-A	Q8TGU6	64 aa		5.71	□□□□□ -1.5
EBP2	YKL172W	PER1	P25625	357 aa		5.7	□□□□□ -1.5
EBP2	YKL172W	MCD4	P36051	919 aa		5.7	□□□□□ -1.5
EBP2	YKL172W	YHR078W	P38799	552 aa		5.7	□□□□□ -1.5
EBP2	YKL172W	KCS1	Q12494	1050 aa		5.7	□□□□□ -1.5
EBP2	YKL172W	YCL002C	P25565	263 aa		5.69	□□□□□ -1.5
EBP2	YKL172W	STE14	P32584	239 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 112.7 ms