RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	VMS1	Q04311	632 aa	Known RBP	4.57	□□□□□ -1.68
SDS23	YGL056C	ATG33	Q06485	197 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	YTM1	Q12024	460 aa	Predicted RBP	4.57	□□□□□ -1.68
SDS23	YGL056C	SIN3	P22579	1536 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	RNQ1	P25367	405 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	SMY2	P32909	740 aa	Known RBP	4.57	□□□□□ -1.68
SDS23	YGL056C	NNK1	P36003	928 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	SAF1	P38352	637 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	DUG1	P43616	481 aa	Known RBP	4.57	□□□□□ -1.68
SDS23	YGL056C	GYP7	P48365	746 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	YGR021W	P53212	290 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	YGR130C	P53278	816 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	SNP1	Q00916	300 aa	Predicted RBP	4.57	□□□□□ -1.68
SDS23	YGL056C	MET14	Q02196	202 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	COG8	Q04632	607 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	MDM38	Q08179	573 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	PGI1	P12709	554 aa	Known RBP	4.56	□□□□□ -1.68
SDS23	YGL056C	SNF5	P18480	905 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	RSC6	P25632	483 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	DAL3	P32459	195 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	HSP78	P33416	811 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	GPP2	P40106	250 aa	Known RBP	4.56	□□□□□ -1.68
SDS23	YGL056C	GZF3	P42944	551 aa	Known RBP	4.56	□□□□□ -1.68
SDS23	YGL056C	PIP2	P52960	996 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	UBX4	P54730	416 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	HOS3	Q02959	697 aa	Known RBP	4.56	□□□□□ -1.68
SDS23	YGL056C	YDR338C	Q05497	695 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	HRK1	Q08732	759 aa	Known RBP	4.56	□□□□□ -1.68
SDS23	YGL056C	YLL058W	Q12198	575 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	GIN4	Q12263	1142 aa		4.56	□□□□□ -1.68
SDS23	YGL056C	XRN1	P22147	1528 aa	Known RBP	4.55	□□□□□ -1.68
SDS23	YGL056C	BI4	P03879	638 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	GAL1	P04385	528 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	AEP2	P22136	580 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	MIH1	P23748	554 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	GPT2	P36148	743 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	YKR078W	P36158	585 aa	Known RBP	4.55	□□□□□ -1.68
SDS23	YGL056C	GIC1	P38785	314 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	YER158C	P40095	573 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	YKE2	P52553	114 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	MTC3	P53077	123 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	YDR514C	Q04408	483 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	GUP2	Q08929	609 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	NKP1	Q12493	238 aa		4.55	□□□□□ -1.68
SDS23	YGL056C	CHS2	P14180	963 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	REV3	P14284	1504 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	MYO2	P19524	1574 aa	Known RBP	4.54	□□□□□ -1.68
SDS23	YGL056C	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	YSC84	P32793	468 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	TRZ1	P36159	838 aa	Predicted RBP	4.54	□□□□□ -1.68
SDS23	YGL056C	HXT16	P47185	567 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	NIT3	P49954	291 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	SPC105	P53148	917 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	TNA1	P53322	534 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	DSE4	P53753	1117 aa		4.54	□□□□□ -1.68
SDS23	YGL056C	RCL1	Q08096	367 aa	Predicted RBP	4.54	□□□□□ -1.68
SDS23	YGL056C	MPH2	P0CD99	609 aa		4.53	□□□□□ -1.68
SDS23	YGL056C	CDC48	P25694	835 aa	Known RBP	4.53	□□□□□ -1.68
SDS23	YGL056C	DPB3	P27344	201 aa		4.53	□□□□□ -1.68
SDS23	YGL056C	MNN11	P46985	422 aa	Known RBP	4.53	□□□□□ -1.68
SDS23	YGL056C	PBP1	P53297	722 aa	Known RBP	4.53	□□□□□ -1.68
SDS23	YGL056C	SFB2	P53953	876 aa		4.53	□□□□□ -1.68
SDS23	YGL056C	SRT1	Q03175	343 aa		4.53	□□□□□ -1.68
SDS23	YGL056C	TPP1	Q03796	238 aa		4.53	□□□□□ -1.68
SDS23	YGL056C	PUS7	Q08647	676 aa	Known RBP	4.53	□□□□□ -1.68
SDS23	YGL056C	RPA135	P22138	1203 aa	Known RBP	4.53	□□□□□ -1.69
SDS23	YGL056C	CCR4	P31384	837 aa	Known RBP	4.53	□□□□□ -1.69
SDS23	YGL056C	NIC96	P34077	839 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	YKL222C	P35995	705 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	RRP8	P38961	392 aa	Known RBP	4.53	□□□□□ -1.69
SDS23	YGL056C	RSC8	P43609	557 aa	Known RBP	4.53	□□□□□ -1.69
SDS23	YGL056C	YGR153W	P48238	217 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	ALT1	P52893	592 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	TAD1	P53065	400 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	ECM9	Q02202	377 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	EAR1	Q03212	550 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	NHX1	Q04121	633 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	TMA64	Q04600	565 aa	Known RBP	4.53	□□□□□ -1.69
SDS23	YGL056C	REH1	Q06709	432 aa		4.53	□□□□□ -1.69
SDS23	YGL056C	KOG1	P38873	1557 aa		4.52	□□□□□ -1.69
SDS23	YGL056C	SSK2	P53599	1579 aa		4.52	□□□□□ -1.69
SDS23	YGL056C	PTP2	P29461	750 aa		4.52	□□□□□ -1.69
SDS23	YGL056C	CCT5	P40413	562 aa	Known RBP	4.52	□□□□□ -1.69
SDS23	YGL056C	UBC9	P50623	157 aa	Predicted RBP	4.52	□□□□□ -1.69
SDS23	YGL056C	LRS4	Q04087	347 aa	Known RBP	4.52	□□□□□ -1.69
SDS23	YGL056C	PHM6	Q05637	104 aa		4.52	□□□□□ -1.69
SDS23	YGL056C	TY1A-NL1	Q12391	440 aa	Known RBP	4.52	□□□□□ -1.69
SDS23	YGL056C	RMP1	Q12530	201 aa		4.52	□□□□□ -1.69
SDS23	YGL056C	CYC7	P00045	113 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	DAL7	P21826	554 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	YCL002C	P25565	263 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	FUN30	P31380	1131 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	HEM12	P32347	362 aa	Predicted RBP	4.51	□□□□□ -1.69
SDS23	YGL056C	BIT2	P38346	545 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	RET2	P43621	546 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	ALY2	P47029	1046 aa		4.51	□□□□□ -1.69
SDS23	YGL056C	NBA1	Q08229	501 aa	Known RBP	4.51	□□□□□ -1.69
SDS23	YGL056C	RRP6	Q12149	733 aa	Known RBP	4.51	□□□□□ -1.69
SDS23	YGL056C	KCC4	P25389	1037 aa		4.5	□□□□□ -1.69
SDS23	YGL056C	TDA3	P38758	523 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms