RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YLR287CQ05881 355 aa4.61□□□□□ -1.67
PTR3YFR029W YOL114CQ12322 202 aa4.61□□□□□ -1.67
PTR3YFR029W PAH1P32567 862 aa4.6□□□□□ -1.67
PTR3YFR029W SLA1P32790 1244 aa4.6□□□□□ -1.67
PTR3YFR029W PSY4P38193 441 aa4.6□□□□□ -1.67
PTR3YFR029W CKB2P38930 258 aa4.6□□□□□ -1.67
PTR3YFR029W SAH1P39954 449 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W YIL166CP40445 542 aa4.6□□□□□ -1.67
PTR3YFR029W YTM1Q12024 460 aaPredicted RBP4.6□□□□□ -1.67
PTR3YFR029W TUF1P02992 437 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W MRP7P12687 371 aa4.6□□□□□ -1.67
PTR3YFR029W MSD1P15179 658 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W FUR1P18562 216 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W DAL7P21826 554 aa4.6□□□□□ -1.67
PTR3YFR029W PIN4P34217 668 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
PTR3YFR029W SQT1P35184 431 aa4.6□□□□□ -1.67
PTR3YFR029W NOP16P40007 231 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W LSM5P40089 93 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W VHR1P40522 640 aa4.6□□□□□ -1.67
PTR3YFR029W CIT3P43635 486 aa4.6□□□□□ -1.67
PTR3YFR029W MRPL19P53875 158 aa4.6□□□□□ -1.67
PTR3YFR029W ALF1P53904 254 aa4.6□□□□□ -1.67
PTR3YFR029W PEX13P80667 386 aa4.6□□□□□ -1.67
PTR3YFR029W RAT1Q02792 1006 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W UTP21Q06078 939 aaPredicted RBP4.6□□□□□ -1.67
PTR3YFR029W RKM4Q12504 494 aa4.6□□□□□ -1.67
PTR3YFR029W SMC6Q12749 1114 aa4.6□□□□□ -1.67
PTR3YFR029W RPP2BP02400 110 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W LEU1P07264 779 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W HSF1P10961 833 aa4.59□□□□□ -1.67
PTR3YFR029W RED1P14291 827 aa4.59□□□□□ -1.67
PTR3YFR029W RET1P22276 1149 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W RER1P25560 188 aa4.59□□□□□ -1.67
PTR3YFR029W CBF2P32504 956 aa4.59□□□□□ -1.67
PTR3YFR029W MTH1P35198 433 aa4.59□□□□□ -1.67
PTR3YFR029W PCM1P38628 557 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W LTP1P40347 161 aa4.59□□□□□ -1.67
PTR3YFR029W SEC9P40357 651 aa4.59□□□□□ -1.67
PTR3YFR029W IMA5P40884 581 aa4.59□□□□□ -1.67
PTR3YFR029W GCD10P41814 478 aa4.59□□□□□ -1.67
PTR3YFR029W RMD8P43620 662 aa4.59□□□□□ -1.67
PTR3YFR029W YGL176CP46945 554 aa4.59□□□□□ -1.67
PTR3YFR029W SET2P46995 733 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W RNR4P49723 345 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W MSN5P52918 1224 aa4.59□□□□□ -1.67
PTR3YFR029W BNI5P53890 448 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W CUS1Q02554 436 aaPredicted RBP4.59□□□□□ -1.67
PTR3YFR029W YMR018WQ04364 514 aa4.59□□□□□ -1.67
PTR3YFR029W RNH1Q04740 348 aa4.59□□□□□ -1.67
PTR3YFR029W YPR172WQ06608 200 aa4.59□□□□□ -1.67
PTR3YFR029W HIM1Q06674 414 aa4.59□□□□□ -1.67
PTR3YFR029W CUE5Q08412 411 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W NOP58Q12499 511 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W MIH1P23748 554 aa4.58□□□□□ -1.68
PTR3YFR029W PGS1P25578 521 aa4.58□□□□□ -1.68
PTR3YFR029W DUN1P39009 513 aa4.58□□□□□ -1.68
PTR3YFR029W JEM1P40358 645 aa4.58□□□□□ -1.68
PTR3YFR029W MPH1P40562 993 aa4.58□□□□□ -1.68
PTR3YFR029W AXL1P40851 1208 aa4.58□□□□□ -1.68
PTR3YFR029W GZF3P42944 551 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W SYF1Q04048 859 aaPredicted RBP4.58□□□□□ -1.68
PTR3YFR029W YDR338CQ05497 695 aa4.58□□□□□ -1.68
PTR3YFR029W ENT1Q12518 454 aa4.58□□□□□ -1.68
PTR3YFR029W RPS21AP0C0V8 87 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W YER152CP10356 443 aa4.58□□□□□ -1.68
PTR3YFR029W CBP3P21560 335 aa4.58□□□□□ -1.68
PTR3YFR029W AFR1P33304 620 aa4.58□□□□□ -1.68
PTR3YFR029W PET10P36139 283 aa4.58□□□□□ -1.68
PTR3YFR029W YBR238CP38330 731 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W SRP72P38688 640 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W AXL2P38928 823 aa4.58□□□□□ -1.68
PTR3YFR029W SIT1P39980 628 aa4.58□□□□□ -1.68
PTR3YFR029W TAD1P53065 400 aa4.58□□□□□ -1.68
PTR3YFR029W AIM14P53109 570 aa4.58□□□□□ -1.68
PTR3YFR029W ARC35P53731 342 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W YNR040WP53736 256 aa4.58□□□□□ -1.68
PTR3YFR029W ECM9Q02202 377 aa4.58□□□□□ -1.68
PTR3YFR029W PRP42Q03776 544 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W AOS1Q06624 347 aa4.58□□□□□ -1.68
PTR3YFR029W APC5Q08683 685 aa4.58□□□□□ -1.68
PTR3YFR029W SMF3Q12078 473 aaPredicted RBP4.58□□□□□ -1.68
PTR3YFR029W REX3Q12090 404 aa4.58□□□□□ -1.68
PTR3YFR029W RMP1Q12530 201 aa4.58□□□□□ -1.68
PTR3YFR029W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
PTR3YFR029W TY1A-LR4P0C2I8 440 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W TY1A-DR6P0CX70 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-ER1P0CX71 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-LR2P0CX72 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-PLP0CX73 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-JR1P0CX74 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-LR3P0CX75 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-ML2P0CX76 440 aa4.57□□□□□ -1.68
PTR3YFR029W COX11P19516 300 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W SYP1P25623 870 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W PDC6P26263 563 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W CMK1P27466 446 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W TFB1P32776 642 aa4.57□□□□□ -1.68
PTR3YFR029W AFG2P32794 780 aa4.57□□□□□ -1.68
PTR3YFR029W SHM2P37291 469 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W YEL068CP39977 110 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms