RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W YMR187CQ03236 431 aa7.18□□□□□ -1.26
RGD2YFL047W YML082WQ04533 649 aaKnown RBP7.18□□□□□ -1.26
RGD2YFL047W PNP1Q05788 311 aa7.18□□□□□ -1.26
RGD2YFL047W YBL111CQ3E7Y5 667 aa7.18□□□□□ -1.26
RGD2YFL047W SPT2P06843 333 aaPredicted RBP7.18□□□□□ -1.26
RGD2YFL047W PSE1P32337 1089 aaKnown RBP7.18□□□□□ -1.26
RGD2YFL047W SWE1P32944 819 aa7.18□□□□□ -1.26
RGD2YFL047W PGM1P33401 570 aaKnown RBP7.18□□□□□ -1.26
RGD2YFL047W YMR1P47147 688 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
RGD2YFL047W CTT1P06115 562 aa7.17□□□□□ -1.26
RGD2YFL047W PHO8P11491 566 aa7.17□□□□□ -1.26
RGD2YFL047W SUV3P32580 737 aa7.17□□□□□ -1.26
RGD2YFL047W RAD54P32863 898 aa7.17□□□□□ -1.26
RGD2YFL047W EXO5P38289 585 aa7.17□□□□□ -1.26
RGD2YFL047W SAP185P40856 1058 aa7.17□□□□□ -1.26
RGD2YFL047W ATG36P46983 293 aa7.17□□□□□ -1.26
RGD2YFL047W URB2P47108 1174 aa7.17□□□□□ -1.26
RGD2YFL047W SOL4P53315 255 aa7.17□□□□□ -1.26
RGD2YFL047W TAF9Q05027 157 aa7.17□□□□□ -1.26
RGD2YFL047W SWI6P09959 803 aa7.16□□□□□ -1.26
RGD2YFL047W CHS2P14180 963 aa7.16□□□□□ -1.26
RGD2YFL047W CDC10P25342 322 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W YCR051WP25631 222 aa7.16□□□□□ -1.26
RGD2YFL047W CDC11P32458 415 aa7.16□□□□□ -1.26
RGD2YFL047W PDB1P32473 366 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W GCD6P32501 712 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W RRT2P38332 387 aa7.16□□□□□ -1.26
RGD2YFL047W MMS21P38632 267 aa7.16□□□□□ -1.26
RGD2YFL047W RPN3P40016 523 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W COS5P47187 383 aa7.16□□□□□ -1.26
RGD2YFL047W TIM8P57744 87 aa7.16□□□□□ -1.26
RGD2YFL047W CUR1Q06469 252 aa7.16□□□□□ -1.26
RGD2YFL047W RLP24Q07915 199 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W PMR1P13586 950 aa7.16□□□□□ -1.26
RGD2YFL047W ARG1P22768 420 aa7.16□□□□□ -1.26
RGD2YFL047W CAP1P28495 268 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W VPS35P34110 944 aa7.16□□□□□ -1.26
RGD2YFL047W VPS70P47161 811 aa7.16□□□□□ -1.26
RGD2YFL047W CTR1P49573 406 aa7.16□□□□□ -1.26
RGD2YFL047W JJJ1P53863 590 aa7.16□□□□□ -1.26
RGD2YFL047W SEN54Q02825 467 aaPredicted RBP7.16□□□□□ -1.26
RGD2YFL047W TMA64Q04600 565 aaKnown RBP7.16□□□□□ -1.26
RGD2YFL047W YDL206WQ12424 762 aa7.16□□□□□ -1.26
RGD2YFL047W ILV6P25605 309 aaKnown RBP7.15□□□□□ -1.26
RGD2YFL047W KIP1P28742 1111 aa7.15□□□□□ -1.26
RGD2YFL047W PLC1P32383 869 aa7.15□□□□□ -1.26
RGD2YFL047W UBP13P38187 747 aa7.15□□□□□ -1.26
RGD2YFL047W ECM2P38241 364 aaKnown RBP7.15□□□□□ -1.26
RGD2YFL047W PHO88P38264 188 aaPredicted RBP7.15□□□□□ -1.26
RGD2YFL047W HIS2P38635 335 aa7.15□□□□□ -1.26
RGD2YFL047W ERC1P38767 581 aa7.15□□□□□ -1.26
RGD2YFL047W SHC1P39000 512 aa7.15□□□□□ -1.26
RGD2YFL047W LIF1P53150 421 aa7.15□□□□□ -1.26
RGD2YFL047W YGL039WP53183 348 aaKnown RBP7.15□□□□□ -1.26
RGD2YFL047W ENV11P53246 860 aa7.15□□□□□ -1.26
RGD2YFL047W CNM67P53865 581 aaKnown RBP7.15□□□□□ -1.26
RGD2YFL047W ADA2Q02336 434 aa7.15□□□□□ -1.26
RGD2YFL047W UTP6Q02354 440 aaKnown RBP7.15□□□□□ -1.26
RGD2YFL047W CRF1Q04930 467 aa7.15□□□□□ -1.26
RGD2YFL047W FRA1Q07825 749 aa7.15□□□□□ -1.26
RGD2YFL047W SLX4Q12098 748 aa7.15□□□□□ -1.26
RGD2YFL047W ADH4P10127 382 aa7.15□□□□□ -1.27
RGD2YFL047W KAR3P17119 729 aa7.15□□□□□ -1.27
RGD2YFL047W YSC83P32792 385 aa7.15□□□□□ -1.27
RGD2YFL047W PBP2P38151 413 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
RGD2YFL047W FIS1P40515 155 aa7.15□□□□□ -1.27
RGD2YFL047W NCS2P53923 493 aaPredicted RBP7.15□□□□□ -1.27
RGD2YFL047W MTG1Q03151 367 aaPredicted RBP7.15□□□□□ -1.27
RGD2YFL047W MPC54Q08550 464 aa7.15□□□□□ -1.27
RGD2YFL047W ACM1Q08981 209 aa7.15□□□□□ -1.27
RGD2YFL047W SEY1Q99287 776 aa7.15□□□□□ -1.27
RGD2YFL047W SNF1P06782 633 aaKnown RBP7.14□□□□□ -1.27
RGD2YFL047W ERG12P07277 443 aa7.14□□□□□ -1.27
RGD2YFL047W RAD18P10862 487 aa7.14□□□□□ -1.27
RGD2YFL047W PEP5P12868 1029 aa7.14□□□□□ -1.27
RGD2YFL047W GPI10P30777 616 aa7.14□□□□□ -1.27
RGD2YFL047W LOS1P33418 1100 aaPredicted RBP7.14□□□□□ -1.27
RGD2YFL047W NCL1P38205 684 aaKnown RBP7.14□□□□□ -1.27
RGD2YFL047W YBR062CP38239 180 aa7.14□□□□□ -1.27
RGD2YFL047W END3P39013 349 aa7.14□□□□□ -1.27
RGD2YFL047W PSY2P40164 858 aa7.14□□□□□ -1.27
RGD2YFL047W ATG1P53104 897 aa7.14□□□□□ -1.27
RGD2YFL047W CPR6P53691 371 aaKnown RBP7.14□□□□□ -1.27
RGD2YFL047W TRM44Q02648 567 aaKnown RBP7.14□□□□□ -1.27
RGD2YFL047W PHM6Q05637 104 aa7.14□□□□□ -1.27
RGD2YFL047W NCA2Q12374 616 aa7.14□□□□□ -1.27
RGD2YFL047W GAP1P19145 602 aaPredicted RBP7.13□□□□□ -1.27
RGD2YFL047W PUF4P25339 888 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
RGD2YFL047W EUG1P32474 517 aa7.13□□□□□ -1.27
RGD2YFL047W YME1P32795 747 aa7.13□□□□□ -1.27
RGD2YFL047W TIF5P38431 405 aaKnown RBP7.13□□□□□ -1.27
RGD2YFL047W SAK1P38990 1142 aa7.13□□□□□ -1.27
RGD2YFL047W ZPR1P53303 486 aaKnown RBP7.13□□□□□ -1.27
RGD2YFL047W DUS4Q06063 367 aa7.13□□□□□ -1.27
RGD2YFL047W NCR1Q12200 1170 aa7.13□□□□□ -1.27
RGD2YFL047W RKM4Q12504 494 aa7.13□□□□□ -1.27
RGD2YFL047W PGK1P00560 416 aaKnown RBP7.13□□□□□ -1.27
RGD2YFL047W SEC21P32074 935 aaKnown RBP7.13□□□□□ -1.27
RGD2YFL047W TGL1P34163 548 aa7.13□□□□□ -1.27
RGD2YFL047W HEL1P36113 551 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms