RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	YDR514C	Q04408	483 aa		5.23	□□□□□ -1.57
YFL040W	YFL040W	SEG2	P34250	1132 aa		5.22	□□□□□ -1.57
YFL040W	YFL040W	MEF2	P39677	819 aa		5.22	□□□□□ -1.57
YFL040W	YFL040W	TY4A-J	P47023	414 aa		5.22	□□□□□ -1.57
YFL040W	YFL040W	GTF1	P53260	183 aa	Predicted RBP	5.22	□□□□□ -1.57
YFL040W	YFL040W	PBP1	P53297	722 aa	Known RBP	5.22	□□□□□ -1.57
YFL040W	YFL040W	MET7	Q08645	548 aa		5.22	□□□□□ -1.57
YFL040W	YFL040W	SSB1	P11484	613 aa	Known RBP	5.21	□□□□□ -1.58
YFL040W	YFL040W	DAL7	P21826	554 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	VBA3	P25594	458 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	URA1	P28272	314 aa	Predicted RBP	5.21	□□□□□ -1.58
YFL040W	YFL040W	SSB2	P40150	613 aa	Known RBP	5.21	□□□□□ -1.58
YFL040W	YFL040W	PSP2	P50109	593 aa	Known RBP	5.21	□□□□□ -1.58
YFL040W	YFL040W	HDA1	P53973	706 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	DNM1	P54861	757 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	VPS30	Q02948	557 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	RSC3	Q06639	885 aa		5.21	□□□□□ -1.58
YFL040W	YFL040W	CDC9	P04819	755 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	MTC2	P34246	357 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	POA1	P38218	177 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	GCV2	P49095	1034 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	TAD1	P53065	400 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	NOG2	P53742	486 aa	Known RBP	5.2	□□□□□ -1.58
YFL040W	YFL040W	TPO1	Q07824	586 aa		5.2	□□□□□ -1.58
YFL040W	YFL040W	SPA2	P23201	1466 aa	Known RBP	5.2	□□□□□ -1.58
YFL040W	YFL040W	TOP1	P04786	769 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	RPL8A	P17076	256 aa	Known RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	SFP1	P32432	683 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	RPD3	P32561	433 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	TYE7	P33122	291 aa	Predicted RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	UBP12	P39538	1254 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
YFL040W	YFL040W	RTS3	P53289	263 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	YKR011C	Q02209	353 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	TFB2	Q02939	513 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	SSL1	Q04673	461 aa	Predicted RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	DUS4	Q06063	367 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	REH1	Q06709	432 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	RPS9A	O13516	197 aa	Known RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	SPE1	P08432	466 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	CYS3	P31373	394 aa	Known RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	TSA1	P34760	196 aa	Known RBP	5.19	□□□□□ -1.58
YFL040W	YFL040W	ATG19	P35193	415 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	ADY3	Q07732	790 aa		5.19	□□□□□ -1.58
YFL040W	YFL040W	GAS1	P22146	559 aa	Known RBP	5.18	□□□□□ -1.58
YFL040W	YFL040W	YCL002C	P25565	263 aa		5.18	□□□□□ -1.58
YFL040W	YFL040W	PER1	P25625	357 aa		5.18	□□□□□ -1.58
YFL040W	YFL040W	MET12	P46151	657 aa		5.18	□□□□□ -1.58
YFL040W	YFL040W	GCN5	Q03330	439 aa		5.18	□□□□□ -1.58
YFL040W	YFL040W	LRS4	Q04087	347 aa	Known RBP	5.18	□□□□□ -1.58
YFL040W	YFL040W	GPB1	Q08886	897 aa		5.18	□□□□□ -1.58
YFL040W	YFL040W	SRD1	P09007	221 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	CDC6	P09119	513 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	YIL108W	P40483	696 aa	Known RBP	5.17	□□□□□ -1.58
YFL040W	YFL040W	CAF16	P43569	289 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	YGL081W	P53156	320 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	YNL193W	P53870	558 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	YDR132C	Q03900	495 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	CDA2	Q06703	312 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	RXT3	Q07458	294 aa		5.17	□□□□□ -1.58
YFL040W	YFL040W	ADR1	P07248	1323 aa		5.16	□□□□□ -1.58
YFL040W	YFL040W	RPS13	P05756	151 aa	Known RBP	5.16	□□□□□ -1.58
YFL040W	YFL040W	FBP1	P09201	348 aa		5.16	□□□□□ -1.58
YFL040W	YFL040W	STO1	P34160	861 aa	Known RBP	5.16	□□□□□ -1.58
YFL040W	YFL040W	MCD4	P36051	919 aa		5.16	□□□□□ -1.58
YFL040W	YFL040W	YEN1	P40028	759 aa		5.16	□□□□□ -1.58
YFL040W	YFL040W	WHI4	Q07655	649 aa	Known RBP	5.16	□□□□□ -1.58
YFL040W	YFL040W	HMI1	Q12039	706 aa		5.16	□□□□□ -1.58
YFL040W	YFL040W	RPP2A	P05319	106 aa	Known RBP	5.15	□□□□□ -1.58
YFL040W	YFL040W	HIS5	P07172	385 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	EMC1	P25574	760 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	SAP190	P36123	1033 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	AIM3	P38266	947 aa	Known RBP	5.15	□□□□□ -1.58
YFL040W	YFL040W	CRP1	P38845	465 aa	Known RBP	5.15	□□□□□ -1.58
YFL040W	YFL040W	HXT16	P47185	567 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	ZDS1	P50111	915 aa	Known RBP	5.15	□□□□□ -1.58
YFL040W	YFL040W	PRP43	P53131	767 aa	Known RBP	5.15	□□□□□ -1.58
YFL040W	YFL040W	YPL277C	Q08989	487 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	YBR182C-A	Q8TGU6	64 aa		5.15	□□□□□ -1.58
YFL040W	YFL040W	SOD2	P00447	233 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	RAD18	P10862	487 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	NUG1	P40010	520 aa	Known RBP	5.15	□□□□□ -1.59
YFL040W	YFL040W	NIT1	P40447	199 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	URM1	P40554	99 aa	Predicted RBP	5.15	□□□□□ -1.59
YFL040W	YFL040W	RLP7	P40693	322 aa	Known RBP	5.15	□□□□□ -1.59
YFL040W	YFL040W	SPT20	P50875	604 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	PUS2	P53167	370 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	VPS62	P53285	467 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	YLR001C	Q07895	862 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	HAL9	Q12180	1030 aa		5.15	□□□□□ -1.59
YFL040W	YFL040W	PRC1	P00729	532 aa		5.14	□□□□□ -1.59
YFL040W	YFL040W	SHR5	P41912	237 aa		5.14	□□□□□ -1.59
YFL040W	YFL040W	CHA4	P43634	648 aa		5.14	□□□□□ -1.59
YFL040W	YFL040W	AVT1	P47082	602 aa		5.14	□□□□□ -1.59
YFL040W	YFL040W	SNP1	Q00916	300 aa	Predicted RBP	5.14	□□□□□ -1.59
YFL040W	YFL040W	ACK1	Q07622	623 aa	Predicted RBP	5.14	□□□□□ -1.59
YFL040W	YFL040W	YOR022C	Q12204	715 aa		5.14	□□□□□ -1.59
YFL040W	YFL040W	PCL2	P25693	308 aa		5.13	□□□□□ -1.59
YFL040W	YFL040W	CDC20	P26309	610 aa		5.13	□□□□□ -1.59
YFL040W	YFL040W	YEL1	P34225	687 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms