RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W WHI4Q07655 649 aaKnown RBP1.8□□□□□ -2.12
SMC1YFL008W YLL054CQ12244 843 aa1.8□□□□□ -2.12
SMC1YFL008W GAL10P04397 699 aa1.79□□□□□ -2.12
SMC1YFL008W CIT2P08679 460 aa1.79□□□□□ -2.12
SMC1YFL008W SQT1P35184 431 aa1.79□□□□□ -2.12
SMC1YFL008W MND2P40577 368 aa1.79□□□□□ -2.12
SMC1YFL008W GYP7P48365 746 aa1.79□□□□□ -2.12
SMC1YFL008W HNT2P49775 206 aa1.79□□□□□ -2.12
SMC1YFL008W UPC2Q12151 913 aa1.79□□□□□ -2.12
SMC1YFL008W CAN1P04817 590 aa1.79□□□□□ -2.12
SMC1YFL008W PRI2P20457 528 aa1.79□□□□□ -2.12
SMC1YFL008W LAM1P38851 1228 aa1.79□□□□□ -2.12
SMC1YFL008W GTS1P40956 396 aa1.79□□□□□ -2.12
SMC1YFL008W ECL1P48235 211 aa1.79□□□□□ -2.12
SMC1YFL008W GCN5Q03330 439 aa1.79□□□□□ -2.12
SMC1YFL008W YLR001CQ07895 862 aa1.79□□□□□ -2.12
SMC1YFL008W ENV7Q12003 364 aa1.79□□□□□ -2.12
SMC1YFL008W KCS1Q12494 1050 aa1.79□□□□□ -2.12
SMC1YFL008W MEF1P25039 761 aa1.79□□□□□ -2.12
SMC1YFL008W YKL222CP35995 705 aa1.79□□□□□ -2.12
SMC1YFL008W AIM3P38266 947 aaKnown RBP1.79□□□□□ -2.12
SMC1YFL008W GCV2P49095 1034 aa1.79□□□□□ -2.12
SMC1YFL008W NSE3Q05541 303 aa1.79□□□□□ -2.12
SMC1YFL008W URN1Q06525 465 aaKnown RBP1.79□□□□□ -2.12
SMC1YFL008W TRM732Q03496 1420 aa1.78□□□□□ -2.12
SMC1YFL008W URB1P34241 1764 aaKnown RBP1.78□□□□□ -2.12
SMC1YFL008W PMA1P05030 918 aaKnown RBP1.78□□□□□ -2.12
SMC1YFL008W ERR1P0CX10 437 aa1.78□□□□□ -2.12
SMC1YFL008W ERR2P0CX11 437 aa1.78□□□□□ -2.12
SMC1YFL008W ADP1P25371 1049 aa1.78□□□□□ -2.12
SMC1YFL008W SNU71P53207 620 aaKnown RBP1.78□□□□□ -2.12
SMC1YFL008W SSL1Q04673 461 aaPredicted RBP1.78□□□□□ -2.12
SMC1YFL008W YMR074CQ04773 145 aa1.78□□□□□ -2.12
SMC1YFL008W RPS13P05756 151 aaKnown RBP1.78□□□□□ -2.12
SMC1YFL008W YKR078WP36158 585 aaKnown RBP1.78□□□□□ -2.12
SMC1YFL008W TOK1P40310 691 aa1.78□□□□□ -2.12
SMC1YFL008W TNA1P53322 534 aa1.78□□□□□ -2.12
SMC1YFL008W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SMC1YFL008W THI21Q08975 551 aa1.78□□□□□ -2.12
SMC1YFL008W SPP41P38904 1435 aa1.78□□□□□ -2.12
SMC1YFL008W NUP159P40477 1460 aa1.78□□□□□ -2.12
SMC1YFL008W MSD1P15179 658 aaKnown RBP1.78□□□□□ -2.13
SMC1YFL008W PIN4P34217 668 aaKnown RBP RIP-Chip data1.78□□□□□ -2.13not detected
SMC1YFL008W POL12P38121 705 aaPredicted RBP1.78□□□□□ -2.13
SMC1YFL008W GGA2P38817 585 aaKnown RBP1.78□□□□□ -2.13
SMC1YFL008W RSP5P39940 809 aaKnown RBP1.78□□□□□ -2.13
SMC1YFL008W HUL5P53119 910 aa1.78□□□□□ -2.13
SMC1YFL008W HMO1Q03973 246 aaKnown RBP1.78□□□□□ -2.13
SMC1YFL008W AVO1Q08236 1176 aa1.78□□□□□ -2.13
SMC1YFL008W YBR182C-AQ8TGU6 64 aa1.78□□□□□ -2.13
SMC1YFL008W MDM12Q92328 271 aa1.78□□□□□ -2.13
SMC1YFL008W FUN30P31380 1131 aa1.77□□□□□ -2.13
SMC1YFL008W PET10P36139 283 aa1.77□□□□□ -2.13
SMC1YFL008W UBP5P39944 805 aa1.77□□□□□ -2.13
SMC1YFL008W YGR283CP53336 341 aaPredicted RBP1.77□□□□□ -2.13
SMC1YFL008W ARP4P80428 489 aa1.77□□□□□ -2.13
SMC1YFL008W YDR338CQ05497 695 aa1.77□□□□□ -2.13
SMC1YFL008W HRK1Q08732 759 aaKnown RBP1.77□□□□□ -2.13
SMC1YFL008W LAP2Q10740 671 aa1.77□□□□□ -2.13
SMC1YFL008W CTS1P29029 562 aa1.77□□□□□ -2.13
SMC1YFL008W GID8P40208 455 aa1.77□□□□□ -2.13
SMC1YFL008W YAP6Q03935 383 aa1.77□□□□□ -2.13
SMC1YFL008W FLC1Q08967 793 aa1.77□□□□□ -2.13
SMC1YFL008W GAS1P22146 559 aaKnown RBP1.77□□□□□ -2.13
SMC1YFL008W SEC6P32844 805 aa1.77□□□□□ -2.13
SMC1YFL008W DEF1P35732 738 aaKnown RBP1.77□□□□□ -2.13
SMC1YFL008W PBY1P38254 753 aa1.77□□□□□ -2.13
SMC1YFL008W UBP6P43593 499 aaKnown RBP1.77□□□□□ -2.13
SMC1YFL008W CLU1Q03690 1277 aaKnown RBP1.77□□□□□ -2.13
SMC1YFL008W ASM4Q05166 528 aa1.77□□□□□ -2.13
SMC1YFL008W JIP5Q06214 492 aaPredicted RBP1.77□□□□□ -2.13
SMC1YFL008W SVS1Q12254 260 aa1.77□□□□□ -2.13
SMC1YFL008W BCK1Q01389 1478 aa1.76□□□□□ -2.13
SMC1YFL008W MTC2P34246 357 aa1.76□□□□□ -2.13
SMC1YFL008W YKL107WP34251 309 aa1.76□□□□□ -2.13
SMC1YFL008W KIN4Q01919 800 aa1.76□□□□□ -2.13
SMC1YFL008W LEE1Q02799 301 aaKnown RBP1.76□□□□□ -2.13
SMC1YFL008W SGD1Q06132 899 aa1.76□□□□□ -2.13
SMC1YFL008W ESC8Q08119 714 aa1.76□□□□□ -2.13
SMC1YFL008W YCL002CP25565 263 aa1.76□□□□□ -2.13
SMC1YFL008W CTF8P38877 133 aa1.76□□□□□ -2.13
SMC1YFL008W PHO23P50947 330 aa1.76□□□□□ -2.13
SMC1YFL008W UBX5Q06682 500 aa1.76□□□□□ -2.13
SMC1YFL008W NOP12Q08208 459 aaKnown RBP1.76□□□□□ -2.13
SMC1YFL008W RPD3P32561 433 aa1.76□□□□□ -2.13
SMC1YFL008W MCD4P36051 919 aa1.76□□□□□ -2.13
SMC1YFL008W PBP2P38151 413 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SMC1YFL008W GIS1Q03833 894 aa1.76□□□□□ -2.13
SMC1YFL008W HIS5P07172 385 aa1.75□□□□□ -2.13
SMC1YFL008W SPS1P08458 490 aa1.75□□□□□ -2.13
SMC1YFL008W RAD4P14736 754 aa1.75□□□□□ -2.13
SMC1YFL008W SEC21P32074 935 aaKnown RBP1.75□□□□□ -2.13
SMC1YFL008W RFC5P38251 354 aa1.75□□□□□ -2.13
SMC1YFL008W GPG1P53130 126 aa1.75□□□□□ -2.13
SMC1YFL008W RIM8P53179 542 aa1.75□□□□□ -2.13
SMC1YFL008W TPO1Q07824 586 aa1.75□□□□□ -2.13
SMC1YFL008W EMC1P25574 760 aa1.75□□□□□ -2.13
SMC1YFL008W KAR4P25583 335 aa1.75□□□□□ -2.13
SMC1YFL008W AIM26P32858 118 aa1.75□□□□□ -2.13
SMC1YFL008W SPC29P33419 253 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms