RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	SNU71	P53207	620 aa	Known RBP	5.76	□□□□□ -1.49
YEA4	YEL004W	YML122C	Q03207	126 aa		5.76	□□□□□ -1.49
YEA4	YEL004W	PEX19	Q07418	342 aa		5.76	□□□□□ -1.49
YEA4	YEL004W	ALG7	P07286	448 aa		5.75	□□□□□ -1.49
YEA4	YEL004W	TUB3	P09734	445 aa	Known RBP	5.75	□□□□□ -1.49
YEA4	YEL004W	PFD1	P46988	109 aa		5.75	□□□□□ -1.49
YEA4	YEL004W	HDA1	P53973	706 aa		5.75	□□□□□ -1.49
YEA4	YEL004W	RNT1	Q02555	471 aa		5.75	□□□□□ -1.49
YEA4	YEL004W	TDA5	Q06417	326 aa	Known RBP	5.75	□□□□□ -1.49
YEA4	YEL004W	MCH5	Q08777	521 aa		5.75	□□□□□ -1.49
YEA4	YEL004W	CTF8	P38877	133 aa		5.74	□□□□□ -1.49
YEA4	YEL004W	OMS1	Q06668	471 aa		5.74	□□□□□ -1.49
YEA4	YEL004W	PPR1	P07272	904 aa	Predicted RBP	5.73	□□□□□ -1.49
YEA4	YEL004W	CEP3	P40969	608 aa		5.73	□□□□□ -1.49
YEA4	YEL004W	YKR011C	Q02209	353 aa		5.73	□□□□□ -1.49
YEA4	YEL004W	RFA1	P22336	621 aa	Known RBP	5.72	□□□□□ -1.49
YEA4	YEL004W	YBR284W	P38150	797 aa		5.72	□□□□□ -1.49
YEA4	YEL004W	VPS30	Q02948	557 aa		5.72	□□□□□ -1.49
YEA4	YEL004W	LCD1	Q04377	747 aa		5.72	□□□□□ -1.49
YEA4	YEL004W	PRP4	P20053	465 aa	Known RBP	5.71	□□□□□ -1.5
YEA4	YEL004W	TYE7	P33122	291 aa	Predicted RBP	5.71	□□□□□ -1.5
YEA4	YEL004W	CTF13	P35203	478 aa		5.71	□□□□□ -1.5
YEA4	YEL004W	QRI1	P43123	477 aa	Known RBP	5.71	□□□□□ -1.5
YEA4	YEL004W	CCM1	P48237	864 aa	Predicted RBP	5.71	□□□□□ -1.5
YEA4	YEL004W	MRPS35	P53292	345 aa		5.71	□□□□□ -1.5
YEA4	YEL004W	ACF2	Q12168	779 aa		5.71	□□□□□ -1.5
YEA4	YEL004W	YPR071W	Q12346	211 aa		5.71	□□□□□ -1.5
YEA4	YEL004W	URA1	P28272	314 aa	Predicted RBP	5.7	□□□□□ -1.5
YEA4	YEL004W	ALR2	P43553	858 aa		5.7	□□□□□ -1.5
YEA4	YEL004W	TPO2	P53283	614 aa		5.7	□□□□□ -1.5
YEA4	YEL004W	FMP25	Q08023	583 aa		5.7	□□□□□ -1.5
YEA4	YEL004W	PRP9	P19736	530 aa	Known RBP	5.69	□□□□□ -1.5
YEA4	YEL004W	REC104	P33323	182 aa		5.69	□□□□□ -1.5
YEA4	YEL004W	IRC10	Q08118	586 aa		5.69	□□□□□ -1.5
YEA4	YEL004W	SWM1	Q12379	170 aa		5.69	□□□□□ -1.5
YEA4	YEL004W	MTH1	P35198	433 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	PPS1	P38148	807 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	GND2	P53319	492 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	UBX5	Q06682	500 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	FRE5	Q08908	694 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	TRM11	Q12463	433 aa		5.68	□□□□□ -1.5
YEA4	YEL004W	YHR078W	P38799	552 aa		5.67	□□□□□ -1.5
YEA4	YEL004W	ELO3	P40319	345 aa		5.67	□□□□□ -1.5
YEA4	YEL004W	FKH2	P41813	862 aa		5.67	□□□□□ -1.5
YEA4	YEL004W	MSD1	P15179	658 aa	Known RBP	5.66	□□□□□ -1.5
YEA4	YEL004W	GRX1	P25373	110 aa	Known RBP	5.66	□□□□□ -1.5
YEA4	YEL004W	STU2	P46675	888 aa		5.66	□□□□□ -1.5
YEA4	YEL004W	PAM1	P37304	830 aa	Known RBP	5.65	□□□□□ -1.5
YEA4	YEL004W	RPP1	P38786	293 aa		5.65	□□□□□ -1.5
YEA4	YEL004W	VHR1	P40522	640 aa		5.65	□□□□□ -1.5
YEA4	YEL004W	DLT1	Q04216	342 aa		5.65	□□□□□ -1.5
YEA4	YEL004W	ENV7	Q12003	364 aa		5.65	□□□□□ -1.5
YEA4	YEL004W	HBN1	Q96VH4	193 aa		5.65	□□□□□ -1.5
YEA4	YEL004W	RPS9A	O13516	197 aa	Known RBP	5.64	□□□□□ -1.51
YEA4	YEL004W	MET3	P08536	511 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	TOP3	P13099	656 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	RPL8B	P29453	256 aa	Known RBP	5.64	□□□□□ -1.51
YEA4	YEL004W	SPC42	P36094	363 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	MUP1	P50276	574 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	UTP8	P53276	713 aa	Known RBP	5.64	□□□□□ -1.51
YEA4	YEL004W	TIM44	Q01852	431 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	SSF2	Q12153	453 aa	Predicted RBP	5.64	□□□□□ -1.51
YEA4	YEL004W	HAL9	Q12180	1030 aa		5.64	□□□□□ -1.51
YEA4	YEL004W	MPH2	P0CD99	609 aa		5.63	□□□□□ -1.51
YEA4	YEL004W	PET10	P36139	283 aa		5.63	□□□□□ -1.51
YEA4	YEL004W	ATF1	P40353	525 aa		5.63	□□□□□ -1.51
YEA4	YEL004W	ADY4	Q05955	493 aa		5.63	□□□□□ -1.51
YEA4	YEL004W	CAF20	P12962	161 aa	Known RBP	5.62	□□□□□ -1.51
YEA4	YEL004W	CDC11	P32458	415 aa		5.62	□□□□□ -1.51
YEA4	YEL004W	SDS3	P40505	327 aa		5.62	□□□□□ -1.51
YEA4	YEL004W	PUS2	P53167	370 aa		5.62	□□□□□ -1.51
YEA4	YEL004W	DUS1	P53759	423 aa	Known RBP	5.62	□□□□□ -1.51
YEA4	YEL004W	ASI2	P53895	289 aa		5.62	□□□□□ -1.51
YEA4	YEL004W	EAF1	Q06337	982 aa		5.62	□□□□□ -1.51
YEA4	YEL004W	YBR053C	P38235	358 aa		5.61	□□□□□ -1.51
YEA4	YEL004W	LGE1	Q02796	332 aa	Known RBP	5.61	□□□□□ -1.51
YEA4	YEL004W	CYS3	P31373	394 aa	Known RBP	5.6	□□□□□ -1.51
YEA4	YEL004W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
YEA4	YEL004W	YOR022C	Q12204	715 aa		5.6	□□□□□ -1.51
YEA4	YEL004W	YCL002C	P25565	263 aa		5.59	□□□□□ -1.51
YEA4	YEL004W	ERP6	P53198	216 aa		5.59	□□□□□ -1.51
YEA4	YEL004W	NAN1	Q02931	896 aa	Known RBP	5.59	□□□□□ -1.51
YEA4	YEL004W	MUS81	Q04149	632 aa	Predicted RBP	5.59	□□□□□ -1.51
YEA4	YEL004W	HBT1	Q07653	1046 aa	Known RBP	5.59	□□□□□ -1.51
YEA4	YEL004W	WRS1	Q12109	432 aa	Known RBP	5.59	□□□□□ -1.51
YEA4	YEL004W	MRH1	Q12117	320 aa	Predicted RBP	5.59	□□□□□ -1.51
YEA4	YEL004W	DAL7	P21826	554 aa		5.58	□□□□□ -1.52
YEA4	YEL004W	ARE1	P25628	610 aa		5.58	□□□□□ -1.52
YEA4	YEL004W	YHL017W	P38745	532 aa		5.58	□□□□□ -1.52
YEA4	YEL004W	GGA2	P38817	585 aa	Known RBP	5.58	□□□□□ -1.52
YEA4	YEL004W	LRS4	Q04087	347 aa	Known RBP	5.58	□□□□□ -1.52
YEA4	YEL004W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
YEA4	YEL004W	SUT2	Q12286	268 aa		5.58	□□□□□ -1.52
YEA4	YEL004W	RAD4	P14736	754 aa		5.57	□□□□□ -1.52
YEA4	YEL004W	SAK1	P38990	1142 aa		5.57	□□□□□ -1.52
YEA4	YEL004W	YJL163C	P46996	555 aa		5.57	□□□□□ -1.52
YEA4	YEL004W	PKH1	Q03407	766 aa		5.57	□□□□□ -1.52
YEA4	YEL004W	SPO75	Q07798	868 aa		5.57	□□□□□ -1.52
YEA4	YEL004W	GYP8	P43570	497 aa		5.56	□□□□□ -1.52
YEA4	YEL004W	DAS1	P47005	663 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms