RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C MNN4P36044 1178 aa6.27□□□□□ -1.41
SEC20YDR498C SSB2P40150 613 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C YIL089WP40500 205 aa6.27□□□□□ -1.41
SEC20YDR498C MMM1P41800 426 aa6.27□□□□□ -1.41
SEC20YDR498C TCB2P48231 1178 aa6.27□□□□□ -1.41
SEC20YDR498C CCM1P48237 864 aaPredicted RBP6.27□□□□□ -1.41
SEC20YDR498C SCS3P53012 380 aa6.27□□□□□ -1.41
SEC20YDR498C NGL3Q03210 505 aa6.27□□□□□ -1.41
SEC20YDR498C SML1Q04964 104 aa6.27□□□□□ -1.41
SEC20YDR498C YLR287CQ05881 355 aa6.27□□□□□ -1.41
SEC20YDR498C RPC53P25441 422 aa6.26□□□□□ -1.41
SEC20YDR498C PER1P25625 357 aa6.26□□□□□ -1.41
SEC20YDR498C CDC60P26637 1090 aaKnown RBP6.26□□□□□ -1.41
SEC20YDR498C DBP7P36120 742 aaKnown RBP6.26□□□□□ -1.41
SEC20YDR498C MCX1P38323 520 aaPredicted RBP6.26□□□□□ -1.41
SEC20YDR498C YFL034WP43564 1073 aa6.26□□□□□ -1.41
SEC20YDR498C SOV1Q04748 898 aa6.26□□□□□ -1.41
SEC20YDR498C YMR321CQ04898 105 aa6.26□□□□□ -1.41
SEC20YDR498C PHM6Q05637 104 aa6.26□□□□□ -1.41
SEC20YDR498C DUS4Q06063 367 aa6.26□□□□□ -1.41
SEC20YDR498C ISA1Q07821 250 aaPredicted RBP6.26□□□□□ -1.41
SEC20YDR498C MLH2Q07980 695 aa6.26□□□□□ -1.41
SEC20YDR498C SFI1Q12369 946 aa6.26□□□□□ -1.41
SEC20YDR498C NOP58Q12499 511 aaKnown RBP6.26□□□□□ -1.41
SEC20YDR498C YDR461C-AQ2V2P7 80 aa6.26□□□□□ -1.41
SEC20YDR498C TY1A-DR4O74302 440 aa6.25□□□□□ -1.41
SEC20YDR498C PET111P08468 800 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-HP0C2I4 478 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C TY1A-AP0CX57 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-PR1P0CX58 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-ORP0CX59 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-PR2P0CX60 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-DR5P0CX65 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-ER2P0CX66 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-GR3P0CX67 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-LR1P0CX68 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-MR2P0CX69 440 aa6.25□□□□□ -1.41
SEC20YDR498C ERG11P10614 530 aa6.25□□□□□ -1.41
SEC20YDR498C SEC2P17065 759 aa6.25□□□□□ -1.41
SEC20YDR498C APL1P27351 700 aa6.25□□□□□ -1.41
SEC20YDR498C HXT1P32465 570 aa6.25□□□□□ -1.41
SEC20YDR498C XRS2P33301 854 aa6.25□□□□□ -1.41
SEC20YDR498C IXR1P33417 597 aa6.25□□□□□ -1.41
SEC20YDR498C YKL023WP36103 277 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C AVT1P47082 602 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-JR2P47099 440 aa6.25□□□□□ -1.41
SEC20YDR498C TAM41P53230 385 aa6.25□□□□□ -1.41
SEC20YDR498C SEC5P89102 971 aa6.25□□□□□ -1.41
SEC20YDR498C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
SEC20YDR498C DIG1Q03063 452 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C CWC15Q03772 175 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C TY1A-DR1Q03856 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-ML1Q04706 440 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C YDR278CQ05612 105 aa6.25□□□□□ -1.41
SEC20YDR498C VAC14Q06708 880 aa6.25□□□□□ -1.41
SEC20YDR498C CRD1Q07560 283 aa6.25□□□□□ -1.41
SEC20YDR498C CDC53Q12018 815 aaKnown RBP6.25□□□□□ -1.41
SEC20YDR498C TY1A-BRQ12217 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-NL2Q12470 440 aa6.25□□□□□ -1.41
SEC20YDR498C TY1A-GR2Q12485 440 aa6.25□□□□□ -1.41
SEC20YDR498C TRP2P00899 507 aaKnown RBP6.24□□□□□ -1.41
SEC20YDR498C DED1P06634 604 aaKnown RBP6.24□□□□□ -1.41
SEC20YDR498C PCK1P10963 549 aa6.24□□□□□ -1.41
SEC20YDR498C YSC83P32792 385 aa6.24□□□□□ -1.41
SEC20YDR498C TCD1P38756 429 aa6.24□□□□□ -1.41
SEC20YDR498C SMF1P38925 575 aa6.24□□□□□ -1.41
SEC20YDR498C FIG4P42837 879 aa6.24□□□□□ -1.41
SEC20YDR498C PRP31P49704 494 aaPredicted RBP6.24□□□□□ -1.41
SEC20YDR498C CNM67P53865 581 aaKnown RBP6.24□□□□□ -1.41
SEC20YDR498C NCS2P53923 493 aaPredicted RBP6.24□□□□□ -1.41
SEC20YDR498C ROD1Q02805 837 aa6.24□□□□□ -1.41
SEC20YDR498C RRB1Q04225 511 aaKnown RBP6.24□□□□□ -1.41
SEC20YDR498C CUR1Q06469 252 aa6.24□□□□□ -1.41
SEC20YDR498C MED1Q12321 566 aa6.24□□□□□ -1.41
SEC20YDR498C RMP1Q12530 201 aa6.24□□□□□ -1.41
SEC20YDR498C TKL1P23254 680 aaKnown RBP6.23□□□□□ -1.41
SEC20YDR498C KTR2P33550 425 aa6.23□□□□□ -1.41
SEC20YDR498C REG2P38232 338 aa6.23□□□□□ -1.41
SEC20YDR498C REI1P38344 393 aaPredicted RBP6.23□□□□□ -1.41
SEC20YDR498C SDS3P40505 327 aa6.23□□□□□ -1.41
SEC20YDR498C YNL115CP53925 644 aa6.23□□□□□ -1.41
SEC20YDR498C CSR1Q06705 408 aaKnown RBP6.23□□□□□ -1.41
SEC20YDR498C PHO8P11491 566 aa6.22□□□□□ -1.41
SEC20YDR498C TCP1P12612 559 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C YUR1P26725 428 aa6.22□□□□□ -1.41
SEC20YDR498C DPB3P27344 201 aa6.22□□□□□ -1.41
SEC20YDR498C NAM7P30771 971 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C MRF1P30775 413 aaPredicted RBP6.22□□□□□ -1.41
SEC20YDR498C SPT16P32558 1035 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C SMC1P32908 1225 aa6.22□□□□□ -1.41
SEC20YDR498C TRZ1P36159 838 aaPredicted RBP6.22□□□□□ -1.41
SEC20YDR498C CAJ1P39101 391 aa6.22□□□□□ -1.41
SEC20YDR498C YMR124WP39523 943 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C BUD16P39988 312 aa6.22□□□□□ -1.41
SEC20YDR498C RPN3P40016 523 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C RRN7P40992 514 aa6.22□□□□□ -1.41
SEC20YDR498C ENV11P53246 860 aa6.22□□□□□ -1.41
SEC20YDR498C TIM8P57744 87 aa6.22□□□□□ -1.41
SEC20YDR498C SLD5Q03406 294 aa6.22□□□□□ -1.41
SEC20YDR498C YLR297WQ05899 129 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms