RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C TYW3P53177 273 aa1.35□□□□□ -2.19
SEC1YDR164C SFB2P53953 876 aa1.35□□□□□ -2.19
SEC1YDR164C SSL2Q00578 843 aa1.35□□□□□ -2.19
SEC1YDR164C SEC21P32074 935 aaKnown RBP1.35□□□□□ -2.19
SEC1YDR164C YKR078WP36158 585 aaKnown RBP1.35□□□□□ -2.19
SEC1YDR164C SSF1P38789 453 aaPredicted RBP1.35□□□□□ -2.19
SEC1YDR164C GYP7P48365 746 aa1.35□□□□□ -2.19
SEC1YDR164C BPL1P48445 690 aaPredicted RBP1.35□□□□□ -2.19
SEC1YDR164C MRPS35P53292 345 aa1.35□□□□□ -2.19
SEC1YDR164C TRP2P00899 507 aaKnown RBP1.34□□□□□ -2.19
SEC1YDR164C CDC48P25694 835 aaKnown RBP1.34□□□□□ -2.19
SEC1YDR164C FKH2P41813 862 aa1.34□□□□□ -2.19
SEC1YDR164C RIM13Q03792 727 aa1.34□□□□□ -2.19
SEC1YDR164C RGT2Q12300 763 aa1.34□□□□□ -2.19
SEC1YDR164C WHI5Q12416 295 aa1.34□□□□□ -2.19
SEC1YDR164C NOT3P06102 836 aaKnown RBP1.34□□□□□ -2.2
SEC1YDR164C NOP1P15646 327 aaKnown RBP1.34□□□□□ -2.2
SEC1YDR164C RFA1P22336 621 aaKnown RBP1.34□□□□□ -2.2
SEC1YDR164C MOT2P34909 587 aaKnown RBP1.34□□□□□ -2.2
SEC1YDR164C NPP2P39997 493 aa1.34□□□□□ -2.2
SEC1YDR164C SDP1P40479 209 aa1.34□□□□□ -2.2
SEC1YDR164C HSV2P50079 448 aaPredicted RBP1.34□□□□□ -2.2
SEC1YDR164C MUP1P50276 574 aa1.34□□□□□ -2.2
SEC1YDR164C TPO2P53283 614 aa1.34□□□□□ -2.2
SEC1YDR164C RMD1Q03441 430 aa1.34□□□□□ -2.2
SEC1YDR164C SEG1Q04279 960 aa1.34□□□□□ -2.2
SEC1YDR164C TDA9Q04545 1251 aa1.34□□□□□ -2.2
SEC1YDR164C SLK19Q08581 821 aaKnown RBP1.34□□□□□ -2.2
SEC1YDR164C HOM2P13663 365 aaKnown RBP1.33□□□□□ -2.2
SEC1YDR164C CLN2P20438 545 aa1.33□□□□□ -2.2
SEC1YDR164C RPP1P38786 293 aa1.33□□□□□ -2.2
SEC1YDR164C YIL108WP40483 696 aaKnown RBP1.33□□□□□ -2.2
SEC1YDR164C YAP1802P53309 568 aa1.33□□□□□ -2.2
SEC1YDR164C MPS1P54199 764 aa1.33□□□□□ -2.2
SEC1YDR164C PKH1Q03407 766 aa1.33□□□□□ -2.2
SEC1YDR164C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SEC1YDR164C SGO1Q08490 590 aa1.33□□□□□ -2.2
SEC1YDR164C ADE8P04161 214 aa1.32□□□□□ -2.2
SEC1YDR164C PPH3P32345 308 aa1.32□□□□□ -2.2
SEC1YDR164C HIS7P33734 552 aaKnown RBP1.32□□□□□ -2.2
SEC1YDR164C STE13P33894 931 aa1.32□□□□□ -2.2
SEC1YDR164C YJL206CP39529 758 aa1.32□□□□□ -2.2
SEC1YDR164C YIR042CP40586 236 aa1.32□□□□□ -2.2
SEC1YDR164C YJL163CP46996 555 aa1.32□□□□□ -2.2
SEC1YDR164C DUS3Q06053 668 aaKnown RBP1.32□□□□□ -2.2
SEC1YDR164C YPL066WQ12194 479 aa1.32□□□□□ -2.2
SEC1YDR164C RPS9AO13516 197 aaKnown RBP1.32□□□□□ -2.2
SEC1YDR164C CDC12P32468 407 aaKnown RBP1.32□□□□□ -2.2
SEC1YDR164C TYE7P33122 291 aaPredicted RBP1.32□□□□□ -2.2
SEC1YDR164C RSP5P39940 809 aaKnown RBP1.32□□□□□ -2.2
SEC1YDR164C LTP1P40347 161 aa1.32□□□□□ -2.2
SEC1YDR164C SSL1Q04673 461 aaPredicted RBP1.32□□□□□ -2.2
SEC1YDR164C SPC29P33419 253 aa1.31□□□□□ -2.2
SEC1YDR164C MEP2P41948 499 aa1.31□□□□□ -2.2
SEC1YDR164C NET1P47035 1189 aa1.31□□□□□ -2.2
SEC1YDR164C YGR053CP53234 283 aa1.31□□□□□ -2.2
SEC1YDR164C VPS34P22543 875 aa1.31□□□□□ -2.2
SEC1YDR164C PET112P33893 541 aa1.31□□□□□ -2.2
SEC1YDR164C YHR078WP38799 552 aa1.31□□□□□ -2.2
SEC1YDR164C CTF8P38877 133 aa1.31□□□□□ -2.2
SEC1YDR164C REV7P38927 245 aa1.31□□□□□ -2.2
SEC1YDR164C PZF1P39933 429 aa1.31□□□□□ -2.2
SEC1YDR164C YEL020CP39994 560 aa1.31□□□□□ -2.2
SEC1YDR164C POL32P47110 350 aa1.31□□□□□ -2.2
SEC1YDR164C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SEC1YDR164C NRG1Q03125 231 aa1.31□□□□□ -2.2
SEC1YDR164C YLR225CQ05948 407 aaKnown RBP1.31□□□□□ -2.2
SEC1YDR164C TUB3P09734 445 aaKnown RBP1.3□□□□□ -2.2
SEC1YDR164C CDC34P14682 295 aa1.3□□□□□ -2.2
SEC1YDR164C MCM2P29469 868 aa1.3□□□□□ -2.2
SEC1YDR164C EMP70P32802 667 aa1.3□□□□□ -2.2
SEC1YDR164C GLG1P36143 616 aa1.3□□□□□ -2.2
SEC1YDR164C YBR053CP38235 358 aa1.3□□□□□ -2.2
SEC1YDR164C FMP52P40008 231 aa1.3□□□□□ -2.2
SEC1YDR164C ARG2P40360 574 aa1.3□□□□□ -2.2
SEC1YDR164C BNA3P47039 444 aaKnown RBP1.3□□□□□ -2.2
SEC1YDR164C TEL2P53038 688 aa1.3□□□□□ -2.2
SEC1YDR164C YLR149CQ99296 730 aa1.3□□□□□ -2.2
SEC1YDR164C FBP1P09201 348 aa1.3□□□□□ -2.2
SEC1YDR164C STE4P18851 423 aa1.3□□□□□ -2.2
SEC1YDR164C AAR2P32357 355 aaPredicted RBP1.3□□□□□ -2.2
SEC1YDR164C RPD3P32561 433 aa1.3□□□□□ -2.2
SEC1YDR164C MNR2P35724 969 aa1.3□□□□□ -2.2
SEC1YDR164C YBR238CP38330 731 aaKnown RBP1.3□□□□□ -2.2
SEC1YDR164C IPL1P38991 367 aa1.3□□□□□ -2.2
SEC1YDR164C XBP1P40489 647 aa1.3□□□□□ -2.2
SEC1YDR164C CEP3P40969 608 aa1.3□□□□□ -2.2
SEC1YDR164C CCM1P48237 864 aaPredicted RBP1.3□□□□□ -2.2
SEC1YDR164C CTR1P49573 406 aa1.3□□□□□ -2.2
SEC1YDR164C GIS2P53849 153 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
SEC1YDR164C IRC13Q08630 104 aa1.3□□□□□ -2.2
SEC1YDR164C ATG11Q12527 1178 aa1.3□□□□□ -2.2
SEC1YDR164C LAT1P12695 482 aaKnown RBP1.29□□□□□ -2.2
SEC1YDR164C TSL1P38427 1098 aaKnown RBP1.29□□□□□ -2.2
SEC1YDR164C NDC80P40460 691 aa1.29□□□□□ -2.2
SEC1YDR164C VHR1P40522 640 aa1.29□□□□□ -2.2
SEC1YDR164C SMX3P54999 86 aaPredicted RBP1.29□□□□□ -2.2
SEC1YDR164C YKR011CQ02209 353 aa1.29□□□□□ -2.2
SEC1YDR164C SPR28Q04921 423 aa1.29□□□□□ -2.2
SEC1YDR164C YDR306CQ06640 478 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms