RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	HCM1	P25364	564 aa		6.21	□□□□□ -1.42
RPC53	YDL150W	DCG1	P32460	244 aa		6.21	□□□□□ -1.42
RPC53	YDL150W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
RPC53	YDL150W	FAA4	P47912	694 aa	Known RBP	6.21	□□□□□ -1.42
RPC53	YDL150W	PUS9	Q12069	462 aa		6.21	□□□□□ -1.42
RPC53	YDL150W	NTO1	Q12311	748 aa		6.21	□□□□□ -1.42
RPC53	YDL150W	PMA1	P05030	918 aa	Known RBP	6.2	□□□□□ -1.42
RPC53	YDL150W	KRI1	P42846	591 aa	Known RBP	6.2	□□□□□ -1.42
RPC53	YDL150W	CHA4	P43634	648 aa		6.2	□□□□□ -1.42
RPC53	YDL150W	GCV2	P49095	1034 aa		6.2	□□□□□ -1.42
RPC53	YDL150W	AIM44	Q99299	758 aa		6.2	□□□□□ -1.42
RPC53	YDL150W	TY1B-NL2	Q99337	1749 aa	Known RBP	6.19	□□□□□ -1.42
RPC53	YDL150W	HIS5	P07172	385 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	PMI40	P29952	429 aa	Known RBP	6.19	□□□□□ -1.42
RPC53	YDL150W	FUN30	P31380	1131 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	POA1	P38218	177 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	ZRG8	P40021	1076 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	YJL049W	P47048	450 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	GDE1	Q02979	1223 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	SRT1	Q03175	343 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	CDA1	Q06702	301 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	WRS1	Q12109	432 aa	Known RBP	6.19	□□□□□ -1.42
RPC53	YDL150W	OSW2	Q12202	724 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	HAP1	P0CE41	1502 aa		6.19	□□□□□ -1.42
RPC53	YDL150W	RPP2A	P05319	106 aa	Known RBP	6.18	□□□□□ -1.42
RPC53	YDL150W	OCA5	P38738	679 aa		6.18	□□□□□ -1.42
RPC53	YDL150W	GIC1	P38785	314 aa		6.18	□□□□□ -1.42
RPC53	YDL150W	ORC1	P54784	914 aa	Predicted RBP	6.18	□□□□□ -1.42
RPC53	YDL150W	ESC2	Q06340	456 aa		6.18	□□□□□ -1.42
RPC53	YDL150W	SSF2	Q12153	453 aa	Predicted RBP	6.18	□□□□□ -1.42
RPC53	YDL150W	PNS1	Q12412	539 aa		6.18	□□□□□ -1.42
RPC53	YDL150W	AGP1	P25376	633 aa		6.17	□□□□□ -1.42
RPC53	YDL150W	SBA1	P28707	216 aa	Known RBP	6.17	□□□□□ -1.42
RPC53	YDL150W	PLB1	P39105	664 aa		6.17	□□□□□ -1.42
RPC53	YDL150W	MSE1	P48525	536 aa		6.17	□□□□□ -1.42
RPC53	YDL150W	IML1	P47170	1584 aa		6.17	□□□□□ -1.42
RPC53	YDL150W	ECM21	P38167	1117 aa	Known RBP	6.16	□□□□□ -1.42
RPC53	YDL150W	CDC12	P32468	407 aa	Known RBP	6.15	□□□□□ -1.42
RPC53	YDL150W	ABD1	P32783	436 aa	Predicted RBP	6.15	□□□□□ -1.42
RPC53	YDL150W	EXG2	P52911	562 aa		6.15	□□□□□ -1.42
RPC53	YDL150W	YGR012W	P53206	393 aa		6.15	□□□□□ -1.42
RPC53	YDL150W	SLI1	P53304	468 aa		6.15	□□□□□ -1.42
RPC53	YDL150W	IKI3	Q06706	1349 aa	Known RBP	6.15	□□□□□ -1.43
RPC53	YDL150W	NUP188	P52593	1655 aa	Known RBP	6.14	□□□□□ -1.43
RPC53	YDL150W	DEF1	P35732	738 aa	Known RBP	6.14	□□□□□ -1.43
RPC53	YDL150W	NPP2	P39997	493 aa		6.14	□□□□□ -1.43
RPC53	YDL150W	PHO23	P50947	330 aa		6.14	□□□□□ -1.43
RPC53	YDL150W	VMR1	P38735	1592 aa		6.14	□□□□□ -1.43
RPC53	YDL150W	SPE1	P08432	466 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	ENA1	P13587	1091 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	RPC82	P32349	654 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	TYS1	P36421	394 aa	Known RBP	6.13	□□□□□ -1.43
RPC53	YDL150W	CHS7	P38843	316 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	URM1	P40554	99 aa	Predicted RBP	6.13	□□□□□ -1.43
RPC53	YDL150W	IOC3	P43596	787 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	SUN4	P53616	420 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	ENA2	Q01896	1091 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	SHE9	Q04172	456 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	FAL1	Q12099	399 aa	Known RBP	6.13	□□□□□ -1.43
RPC53	YDL150W	ENA5	Q12691	1091 aa		6.13	□□□□□ -1.43
RPC53	YDL150W	HSF1	P10961	833 aa		6.12	□□□□□ -1.43
RPC53	YDL150W	SRB8	P25648	1427 aa		6.12	□□□□□ -1.43
RPC53	YDL150W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
RPC53	YDL150W	OPI10	Q08202	246 aa		6.12	□□□□□ -1.43
RPC53	YDL150W	KCS1	Q12494	1050 aa		6.12	□□□□□ -1.43
RPC53	YDL150W	MBP1	P39678	833 aa		6.11	□□□□□ -1.43
RPC53	YDL150W	SAH1	P39954	449 aa	Known RBP	6.11	□□□□□ -1.43
RPC53	YDL150W	AIM21	P40563	679 aa		6.11	□□□□□ -1.43
RPC53	YDL150W	GYP7	P48365	746 aa		6.11	□□□□□ -1.43
RPC53	YDL150W	SRP1	Q02821	542 aa	Known RBP	6.11	□□□□□ -1.43
RPC53	YDL150W	FPR4	Q06205	392 aa	Predicted RBP	6.11	□□□□□ -1.43
RPC53	YDL150W	YOL098C	Q12496	1037 aa		6.11	□□□□□ -1.43
RPC53	YDL150W	SSM4	P40318	1319 aa		6.1	□□□□□ -1.43
RPC53	YDL150W	SRP101	P32916	621 aa		6.1	□□□□□ -1.43
RPC53	YDL150W	ATG19	P35193	415 aa		6.1	□□□□□ -1.43
RPC53	YDL150W	TDA5	Q06417	326 aa	Known RBP	6.1	□□□□□ -1.43
RPC53	YDL150W	GCN2	P15442	1659 aa		6.1	□□□□□ -1.43
RPC53	YDL150W	YKR078W	P36158	585 aa	Known RBP	6.09	□□□□□ -1.43
RPC53	YDL150W	VBA5	P36172	582 aa		6.09	□□□□□ -1.43
RPC53	YDL150W	YBR238C	P38330	731 aa	Known RBP	6.09	□□□□□ -1.43
RPC53	YDL150W	MSS4	P38994	779 aa		6.09	□□□□□ -1.43
RPC53	YDL150W	PSP2	P50109	593 aa	Known RBP	6.09	□□□□□ -1.43
RPC53	YDL150W	NCS6	P53088	359 aa		6.09	□□□□□ -1.43
RPC53	YDL150W	PRI2	P20457	528 aa		6.08	□□□□□ -1.44
RPC53	YDL150W	CCC2	P38995	1004 aa		6.08	□□□□□ -1.44
RPC53	YDL150W	SPF1	P39986	1215 aa	Known RBP	6.08	□□□□□ -1.44
RPC53	YDL150W	CTF4	Q01454	927 aa		6.08	□□□□□ -1.44
RPC53	YDL150W	NAN1	Q02931	896 aa	Known RBP	6.08	□□□□□ -1.44
RPC53	YDL150W	GIS1	Q03833	894 aa		6.08	□□□□□ -1.44
RPC53	YDL150W	ENB1	Q08299	606 aa		6.08	□□□□□ -1.44
RPC53	YDL150W	BUD21	Q08492	214 aa	Predicted RBP	6.08	□□□□□ -1.44
RPC53	YDL150W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
RPC53	YDL150W	GRX1	P25373	110 aa	Known RBP	6.07	□□□□□ -1.44
RPC53	YDL150W	YKL069W	P36088	180 aa		6.07	□□□□□ -1.44
RPC53	YDL150W	YKE2	P52553	114 aa		6.07	□□□□□ -1.44
RPC53	YDL150W	SFB2	P53953	876 aa		6.07	□□□□□ -1.44
RPC53	YDL150W	KIN4	Q01919	800 aa		6.07	□□□□□ -1.44
RPC53	YDL150W	MRP8	P35719	219 aa		6.06	□□□□□ -1.44
RPC53	YDL150W	DUS3	Q06053	668 aa	Known RBP	6.06	□□□□□ -1.44
RPC53	YDL150W	GUP2	Q08929	609 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms