RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YHR202WP38887 602 aa2.66□□□□□ -1.98
UBP1YDL122W ATG3P40344 310 aa2.66□□□□□ -1.98
UBP1YDL122W ROM1P53046 1155 aa2.66□□□□□ -1.98
UBP1YDL122W JIP5Q06214 492 aaPredicted RBP2.66□□□□□ -1.98
UBP1YDL122W YLL058WQ12198 575 aa2.66□□□□□ -1.98
UBP1YDL122W OSH2Q12451 1283 aa2.66□□□□□ -1.98
UBP1YDL122W YLR422WQ06409 1932 aa2.65□□□□□ -1.99
UBP1YDL122W COQ4O13525 335 aa2.65□□□□□ -1.99
UBP1YDL122W ADK2P26364 225 aa2.65□□□□□ -1.99
UBP1YDL122W MSS51P32335 436 aa2.65□□□□□ -1.99
UBP1YDL122W RME1P32338 300 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W ISF1P32488 338 aa2.65□□□□□ -1.99
UBP1YDL122W YBR238CP38330 731 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W RFC1P38630 861 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W NEM1P38757 446 aa2.65□□□□□ -1.99
UBP1YDL122W MDJ2P42834 146 aa2.65□□□□□ -1.99
UBP1YDL122W JJJ3P47138 172 aa2.65□□□□□ -1.99
UBP1YDL122W YGL039WP53183 348 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W NAM8Q00539 523 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W OYE2Q03558 400 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W PUF6Q04373 656 aaKnown RBP2.65□□□□□ -1.99
UBP1YDL122W RPS14AP06367 137 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W SRM1P21827 482 aa2.64□□□□□ -1.99
UBP1YDL122W RFS1P38234 210 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W MGE1P38523 228 aa2.64□□□□□ -1.99
UBP1YDL122W RAD55P38953 406 aa2.64□□□□□ -1.99
UBP1YDL122W RPS14BP39516 138 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W ESL1P40456 1118 aa2.64□□□□□ -1.99
UBP1YDL122W MAF1P41910 395 aa2.64□□□□□ -1.99
UBP1YDL122W CWC24P53769 259 aa2.64□□□□□ -1.99
UBP1YDL122W KRE33P53914 1056 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W ISR1Q06098 443 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W SKG3Q06315 1026 aa2.64□□□□□ -1.99
UBP1YDL122W YDR306CQ06640 478 aa2.64□□□□□ -1.99
UBP1YDL122W VIP1Q06685 1146 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W PHO87P25360 923 aa2.64□□□□□ -1.99
UBP1YDL122W UTR2P32623 467 aa2.64□□□□□ -1.99
UBP1YDL122W TFB1P32776 642 aa2.64□□□□□ -1.99
UBP1YDL122W WBP1P33767 430 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W REG2P38232 338 aa2.64□□□□□ -1.99
UBP1YDL122W PHO88P38264 188 aaPredicted RBP2.64□□□□□ -1.99
UBP1YDL122W NMD2P38798 1089 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W CRP1P38845 465 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W SPO1P53541 631 aa2.64□□□□□ -1.99
UBP1YDL122W MRI1Q06489 411 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W SPE3Q12074 293 aaKnown RBP2.64□□□□□ -1.99
UBP1YDL122W WTM2Q12206 467 aa2.64□□□□□ -1.99
UBP1YDL122W WHI5Q12416 295 aa2.64□□□□□ -1.99
UBP1YDL122W POL12P38121 705 aaPredicted RBP2.63□□□□□ -1.99
UBP1YDL122W UBP15P50101 1230 aa2.63□□□□□ -1.99
UBP1YDL122W NSG2P53898 299 aa2.63□□□□□ -1.99
UBP1YDL122W FAR11P53917 953 aa2.63□□□□□ -1.99
UBP1YDL122W INM2Q05533 292 aa2.63□□□□□ -1.99
UBP1YDL122W PNP1Q05788 311 aa2.63□□□□□ -1.99
UBP1YDL122W BMS1Q08965 1183 aaKnown RBP2.63□□□□□ -1.99
UBP1YDL122W PDH1Q12428 516 aaKnown RBP2.63□□□□□ -1.99
UBP1YDL122W HRP1Q99383 534 aaKnown RBP2.63□□□□□ -1.99
UBP1YDL122W FUR4P05316 633 aaKnown RBP2.63□□□□□ -1.99
UBP1YDL122W SAM1P10659 382 aaKnown RBP2.63□□□□□ -1.99
UBP1YDL122W HAP4P14064 554 aa2.63□□□□□ -1.99
UBP1YDL122W DAL5P15365 543 aa2.63□□□□□ -1.99
UBP1YDL122W TBS1P38114 1094 aa2.63□□□□□ -1.99
UBP1YDL122W SSN3P39073 555 aa2.63□□□□□ -1.99
UBP1YDL122W THI22Q06490 572 aa2.63□□□□□ -1.99
UBP1YDL122W DAT1P13483 248 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W CYM1P32898 989 aa2.62□□□□□ -1.99
UBP1YDL122W NUP133P36161 1157 aa2.62□□□□□ -1.99
UBP1YDL122W YAP1801P38856 637 aa2.62□□□□□ -1.99
UBP1YDL122W IML2P47031 731 aa2.62□□□□□ -1.99
UBP1YDL122W GCV2P49095 1034 aa2.62□□□□□ -1.99
UBP1YDL122W ALT2P52892 507 aa2.62□□□□□ -1.99
UBP1YDL122W ALT1P52893 592 aa2.62□□□□□ -1.99
UBP1YDL122W CUZ1P53899 274 aa2.62□□□□□ -1.99
UBP1YDL122W IMP4P53941 290 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W DUS3Q06053 668 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W PUN1Q06991 263 aa2.62□□□□□ -1.99
UBP1YDL122W YOL098CQ12496 1037 aa2.62□□□□□ -1.99
UBP1YDL122W ATP1P07251 545 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W RIP1P08067 215 aa2.62□□□□□ -1.99
UBP1YDL122W MRP7P12687 371 aa2.62□□□□□ -1.99
UBP1YDL122W GLO3P38682 493 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W BOL3P39724 118 aa2.62□□□□□ -1.99
UBP1YDL122W HMF1P40037 129 aaKnown RBP2.62□□□□□ -1.99
UBP1YDL122W RSM10Q03201 203 aa2.62□□□□□ -1.99
UBP1YDL122W NUT2Q06213 157 aa2.62□□□□□ -1.99
UBP1YDL122W UTH1P36135 365 aa2.61□□□□□ -1.99
UBP1YDL122W MET1P36150 593 aa2.61□□□□□ -1.99
UBP1YDL122W QDR1P40475 563 aa2.61□□□□□ -1.99
UBP1YDL122W SUM1P46676 1062 aa2.61□□□□□ -1.99
UBP1YDL122W ACF4P47129 309 aa2.61□□□□□ -1.99
UBP1YDL122W ACS2P52910 683 aaKnown RBP2.61□□□□□ -1.99
UBP1YDL122W SDH5Q08230 162 aa2.61□□□□□ -1.99
UBP1YDL122W YPL260WQ08977 551 aa2.61□□□□□ -1.99
UBP1YDL122W LAA1P39526 2014 aa2.61□□□□□ -1.99
UBP1YDL122W PFK1P16861 987 aaKnown RBP2.61□□□□□ -1.99
UBP1YDL122W DIT1P21623 536 aa2.61□□□□□ -1.99
UBP1YDL122W RAD27P26793 382 aa2.61□□□□□ -1.99
UBP1YDL122W VPH1P32563 840 aaKnown RBP2.61□□□□□ -1.99
UBP1YDL122W AHP1P38013 176 aaKnown RBP2.61□□□□□ -1.99
UBP1YDL122W SOH1P38633 127 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms